Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Galeopterus_20variegatus_20[refseq_20GCF_5F000696425.1_202014-06-05]
179,514 sequences; 3,187,660,572 total letters
Query= NC_009334.1
Length=172764
Score E
Sequences producing significant alignments: (Bits) Value
seq3344 127 2e-24
>seq3344
Length=239081
Score = 127 bits (140), Expect = 2e-24
Identities = 117/148 (79%), Gaps = 0/148 (0%)
Strand=Plus/Minus
Query 9861 AGGGCTACCTTGGATGCCAGGCCCTGTCAGAAATGATCCAATTCTACCTGGAGGAAGTCA 9920
|||| ||||| || ||||| ||| ||||||| |||||||| || ||||||||||| || |
Sbjct 170967 AGGGTTACCTGGGTTGCCAAGCCTTGTCAGAGATGATCCAGTTTTACCTGGAGGAGGTGA 170908
Query 9921 TGCCACAGGCTGAAAACCAGGACCCTGAAGCCAAAGACCATGTAAATTCTTTGGGTGAAA 9980
|||| |||||||| ||||| ||||| || ||| || ||||| || || |||| ||||
Sbjct 170907 TGCCCCAGGCTGAGAACCACGACCCAGACATCAAGGAACATGTGAACTCCCTGGGAGAAA 170848
Query 9981 ATCTAAAGACCCTACGGCTCCGCCTGCG 10008
| || |||||||| |||| | |||||
Sbjct 170847 AACTGAAGACCCTCAGGCTGAGGCTGCG 170820
Score = 95.1 bits (104), Expect = 1e-14
Identities = 70/82 (85%), Gaps = 0/82 (0%)
Strand=Plus/Minus
Query 10080 AGCTGCAGGAAAAAGGAATTTACAAAGCCATGAGTGAATTTGACATTTTTATTAACTACA 10139
|||| || || ||||| | ||||||||||||||||| |||||||| ||||| |||||||
Sbjct 168578 AGCTCCAAGAGAAAGGTGTCTACAAAGCCATGAGTGAGTTTGACATCTTTATCAACTACA 168519
Query 10140 TAGAAGCATACATGACAATTAA 10161
|||||| ||||||||||| ||
Sbjct 168518 TAGAAGACTACATGACAATGAA 168497
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 551476544954560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |