Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galeopterus_20variegatus_20[refseq_20GCF_5F000696425.1_202014-06-05] 179,514 sequences; 3,187,660,572 total letters Query= NC_009334.1 Length=172764 Score E Sequences producing significant alignments: (Bits) Value seq3344 127 2e-24 >seq3344 Length=239081 Score = 127 bits (140), Expect = 2e-24 Identities = 117/148 (79%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 9861 AGGGCTACCTTGGATGCCAGGCCCTGTCAGAAATGATCCAATTCTACCTGGAGGAAGTCA 9920 |||| ||||| || ||||| ||| ||||||| |||||||| || ||||||||||| || | Sbjct 170967 AGGGTTACCTGGGTTGCCAAGCCTTGTCAGAGATGATCCAGTTTTACCTGGAGGAGGTGA 170908 Query 9921 TGCCACAGGCTGAAAACCAGGACCCTGAAGCCAAAGACCATGTAAATTCTTTGGGTGAAA 9980 |||| |||||||| ||||| ||||| || ||| || ||||| || || |||| |||| Sbjct 170907 TGCCCCAGGCTGAGAACCACGACCCAGACATCAAGGAACATGTGAACTCCCTGGGAGAAA 170848 Query 9981 ATCTAAAGACCCTACGGCTCCGCCTGCG 10008 | || |||||||| |||| | ||||| Sbjct 170847 AACTGAAGACCCTCAGGCTGAGGCTGCG 170820 Score = 95.1 bits (104), Expect = 1e-14 Identities = 70/82 (85%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 10080 AGCTGCAGGAAAAAGGAATTTACAAAGCCATGAGTGAATTTGACATTTTTATTAACTACA 10139 |||| || || ||||| | ||||||||||||||||| |||||||| ||||| ||||||| Sbjct 168578 AGCTCCAAGAGAAAGGTGTCTACAAAGCCATGAGTGAGTTTGACATCTTTATCAACTACA 168519 Query 10140 TAGAAGCATACATGACAATTAA 10161 |||||| ||||||||||| || Sbjct 168518 TAGAAGACTACATGACAATGAA 168497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 551476544954560