Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galeopterus_20variegatus_20[refseq_20GCF_5F000696425.1_202014-06-05] 179,514 sequences; 3,187,660,572 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq633 134 3e-26 seq5167 113 1e-19 seq3745 109 1e-18 seq1029 102 2e-16 seq4376 93.3 1e-13 seq1192 93.3 1e-13 seq137 93.3 1e-13 >seq633 Length=582679 Score = 134 bits (148), Expect = 3e-26 Identities = 161/218 (74%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || ||||| | || ||||| || |||| |||||| |||| | ||| | |||||| Sbjct 204335 AGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 204394 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| || || |||||||| | ||||||||| || || |||||| ||| Sbjct 204395 TCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCTTTATCC 204454 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| |||||| |||| |||||| | | || || |||| ||||| ||| Sbjct 204455 TGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTC 204514 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635 || || || ||||| ||||| |||||||| |||||| Sbjct 204515 TTGCCGGTCAGAGTCTTCACGAAAATTTG---CATTTT 204549 Score = 120 bits (132), Expect = 7e-22 Identities = 143/194 (74%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 199433 GTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCG 199492 || ||||| || |||| ||||||||||| | ||| | ||||||||||||||||| || Sbjct 204122 GTGGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCT 204181 Query 199493 GCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTC 199552 || |||||||| | ||||||||| || || |||||| ||||| ||||| |||| Sbjct 204182 GCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCTTTATCCTGGATCTTGGCCTTC 204241 Query 199553 ACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTT 199612 || |||| |||||| | | || || |||| ||||| ||||| || || || || Sbjct 204242 ACATTCTCGATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTCTTGCCGGTCAGGGTC 204301 Query 199613 TTCACAAAAATTTG 199626 ||||| || || || Sbjct 204302 TTCACGAAGATCTG 204315 Score = 93.3 bits (102), Expect = 1e-13 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| || ||||| || ||||| || |||| |||||| |||| | ||| | |||||| Sbjct 202806 AGGACCAGATGGAGGGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 202865 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 ||||||||||| || || |||||||| | ||||||||| || Sbjct 202866 TCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGG 202906 >seq5167 Length=254018 Score = 113 bits (124), Expect = 1e-19 Identities = 155/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 199410 GAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCC 199469 ||||||| | ||||| || ||| | |||||||| || | ||| ||||||| |||||| | Sbjct 220495 GAAGTCTAAACACAAGATGAAGATTTGACTCCTTCTGAATGTTATAGTCAGACAAAGTAC 220554 Query 199470 TTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTT 199529 |||||||||||| ||||| || || |||| || | ||||| || ||| |||||||| Sbjct 220555 GTCCATCTTCCAGTTGCTTACCAGCAGAGATCAGTCTTTGCTGATCAGGAGGAATTCCTT 220614 Query 199530 CTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACG 199589 | ||||| ||||| ||| || ||| | || || | ||| || || | | Sbjct 220615 CCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCAAGGGTTCAACCTCAAGAG 220674 Query 199590 TGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||| ||||| ||| | | ||||| || ||||| || Sbjct 220675 TGATGGTCTTCCCCATAAAGGTTTTTACGAAAATCTG 220711 >seq3745 Length=218430 Score = 109 bits (120), Expect = 1e-18 Identities = 154/213 (72%), Gaps = 5/213 (2%) Strand=Plus/Minus Query 199410 GAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCC 199469 ||||||||| ||||| || ||||| |||||||| || | |||||| |||| |||| | Sbjct 138534 GAAGTCTCAACACAAGATGAAGAGTGGACTCCTTCTGAATGTTGTATTCAGACAAATTAT 138475 Query 199470 TTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTT 199529 |||||||||||| ||||| || || || || | |||||| || |||| |||||||| Sbjct 138474 ATCCATCTTCCAGTTGCTTGCCAGCAAA---GACAATCTGCTGATCAGGAAGAATTCCTT 138418 Query 199530 CTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACG 199589 | ||||| ||||| ||| || ||| | || | | | || || || || | Sbjct 138417 CCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATTAGAGGGTTTAACCTCAAAAG 138358 Query 199590 TGATCGTCTTACCCGT-GAGAGTTTTCACAAAA 199621 |||| ||||| ||| | |||||||| |||||| Sbjct 138357 TGATGGTCTTCCCCTTAAAGAGTTTT-ACAAAA 138326 >seq1029 Length=469353 Score = 102 bits (112), Expect = 2e-16 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || ||||| | || ||||| || |||| ||||||||||| || || | |||||| Sbjct 372766 AGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGACCATCT 372825 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||||||| || || |||||||| | | ||||||||| || || || || || Sbjct 372826 TCCAGCTGTTTCCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCT 372885 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| |||||| | | || || || | ||||| ||| Sbjct 372886 TGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTC 372945 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || |||||||| || || Sbjct 372946 TTGCCGGTCAGGGTCTTCACAAAGATCTG 372974 Score = 100 bits (110), Expect = 7e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 |||||| | ||| ||||| ||||| || || | ||||||||||| || || | |||||| Sbjct 371625 CAGGACCAAGTGCAGAGTGGACTCTTTCTGAATGTTGTAGTCAGACAGGGTGCGTCCATC 371684 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 ||||||||| || || || ||||| | | ||||||||| || || || || || Sbjct 371685 TTCCAGCTGTTTCCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGGATCCCCTCCTTGTC 371744 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 || ||||| ||| ||| || | |||||| | | || || || | ||||| || Sbjct 371745 TTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGT 371804 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| || || || || ||||| || || || Sbjct 371805 CTTGCCGGTCAGGGTCTTCACGAAGATCTG 371834 Score = 93.3 bits (102), Expect = 1e-13 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || ||||| | || ||||| || |||| ||||||||||| || || | |||||| Sbjct 371854 AGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGACCATCT 371913 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||||||| || || |||||||| | | ||||||||| || || || || || Sbjct 371914 TCCAGCTGTTTCCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGGATCCCCTCCTTGTCT 371973 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| || | |||||| | | || || || | ||||| ||| Sbjct 371974 TGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTC 372033 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || ||||| || || || Sbjct 372034 TTGCCGGTCAGGGTCTTCACGAAGATCTG 372062 Score = 93.3 bits (102), Expect = 1e-13 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || ||||| | || ||||| || |||| ||||||||||| || || | |||||| Sbjct 372082 AGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGACCATCT 372141 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||||||| || || |||||||| | | ||||||||| || || || || || Sbjct 372142 TCCAGCTGTTTCCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCT 372201 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| || | |||||| | | || || || | ||||| ||| Sbjct 372202 TGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTC 372261 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || ||||| || || || Sbjct 372262 TTGCCGGTCAGGGTCTTCACGAAGATCTG 372290 Score = 93.3 bits (102), Expect = 1e-13 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || ||||| | || ||||| || |||| ||||||||||| || || | |||||| Sbjct 372310 AGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGACCATCT 372369 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||||||| || || |||||||| | | ||||||||| || || || || || Sbjct 372370 TCCAGCTGTTTCCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCT 372429 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| || | |||||| | | || || || | ||||| ||| Sbjct 372430 TGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTC 372489 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || ||||| || || || Sbjct 372490 TTGCCGGTCAGGGTCTTCACGAAGATCTG 372518 Score = 93.3 bits (102), Expect = 1e-13 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || ||||| | || ||||| || |||| ||||||||||| || || | |||||| Sbjct 372538 AGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGACCATCT 372597 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||||||| || || |||||||| | | ||||||||| || || || || || Sbjct 372598 TCCAGCTGTTTCCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCT 372657 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| || | |||||| | | || || || | ||||| ||| Sbjct 372658 TGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTC 372717 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || ||||| || || || Sbjct 372718 TTGCCGGTCAGGGTCTTCACGAAGATCTG 372746 >seq4376 Length=192284 Score = 93.3 bits (102), Expect = 1e-13 Identities = 151/217 (70%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 199410 GAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCC 199469 ||||||||| ||||| | |||||||||| ||| || | ||| || ||| |||| | Sbjct 63446 GAAGTCTCAACACAAGAGGAAGAGTCGACTTCTTCTGAATGTTATAATCA----AAGTAC 63501 Query 199470 TTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTT 199529 |||||||||||| ||||| || || ||| | || | ||||| || ||| |||||||| Sbjct 63502 ATCCATCTTCCAGTTGCTTGCCAGCAAAGGTCAGTCTTTGCTGATCAGGAGGAATTCCTT 63561 Query 199530 CTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACG 199589 | ||||| ||||| ||| || | | | || || | | ||| | || | Sbjct 63562 CCTTATCCTGGATCTTGGCCTTTACATTTCCTATTGTATCCGAGGGTTCAATGTCAAGAA 63621 Query 199590 TGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||| ||||| ||||| || ||||| | ||||| || Sbjct 63622 TGATGGTCTTTCCCGTAAGGGTTTTTATGAAAATCTG 63658 >seq1192 Length=438698 Score = 93.3 bits (102), Expect = 1e-13 Identities = 144/204 (71%), Gaps = 4/204 (2%) Strand=Plus/Plus Query 199410 GAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCC 199469 ||||||||| ||||| ||||| |||||||| || | ||| | | | |||||| | Sbjct 85768 GAAGTCTCAACACAAGA---AGAGTTGACTCCTTCTGAATGTTATGATGAAACAAAGTAC 85824 Query 199470 TTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTT 199529 |||||||||||| ||||| || || ||||| || | ||||| || ||| |||||||| Sbjct 85825 GTCCATCTTCCAGTTGCTTACCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTT 85884 Query 199530 CTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACG 199589 | ||||| |||| ||| ||| ||| || |||| | ||| || || | | Sbjct 85885 CCTTATCCTGGGTCTTGGCCTTTACGTTTTCTGTTGTATCTGAGGGTTCAACCTCAAGAG 85944 Query 199590 TGATCGTCTTACCCGTGAGAGTTT 199613 |||| ||||| ||| | || |||| Sbjct 85945 TGATGGTCTTCCCCATAAG-GTTT 85967 >seq137 Length=1002945 Score = 93.3 bits (102), Expect = 1e-13 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 199410 GAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCC 199469 ||||||||| ||||| || || | | |||| || | |||| |||||| |||||| | Sbjct 838109 GAAGTCTCATCACAAGATGAAGCACGGGCCCCTTCTGAATGTTGCAGTCAGACAAAGTAC 838050 Query 199470 TTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTT 199529 |||||||||||| ||||| || || ||||| || | |||| || ||| ||||||| Sbjct 838049 GTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTGGCTGATCAGGAGGAATTCCTC 837990 Query 199530 CTCGCTCCTGAATCTT 199545 || |||||| ||||| Sbjct 837989 CTTTCTCCTGGATCTT 837974 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1176210053057438