Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Galeopterus_20variegatus_20[refseq_20GCF_5F000696425.1_202014-06-05]
179,514 sequences; 3,187,660,572 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq633 134 3e-26
seq5167 113 1e-19
seq3745 109 1e-18
seq1029 102 2e-16
seq4376 93.3 1e-13
seq1192 93.3 1e-13
seq137 93.3 1e-13
>seq633
Length=582679
Score = 134 bits (148), Expect = 3e-26
Identities = 161/218 (74%), Gaps = 3/218 (1%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || ||||| | || ||||| || |||| |||||| |||| | ||| | ||||||
Sbjct 204335 AGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 204394
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
||||||||||| || || |||||||| | ||||||||| || || |||||| |||
Sbjct 204395 TCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCTTTATCC 204454
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| |||||| |||| |||||| | | || || |||| ||||| |||
Sbjct 204455 TGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTC 204514
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635
|| || || ||||| ||||| |||||||| ||||||
Sbjct 204515 TTGCCGGTCAGAGTCTTCACGAAAATTTG---CATTTT 204549
Score = 120 bits (132), Expect = 7e-22
Identities = 143/194 (74%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 199433 GTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCG 199492
|| ||||| || |||| ||||||||||| | ||| | ||||||||||||||||| ||
Sbjct 204122 GTGGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCT 204181
Query 199493 GCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTC 199552
|| |||||||| | ||||||||| || || |||||| ||||| ||||| ||||
Sbjct 204182 GCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCTTTATCCTGGATCTTGGCCTTC 204241
Query 199553 ACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTT 199612
|| |||| |||||| | | || || |||| ||||| ||||| || || || ||
Sbjct 204242 ACATTCTCGATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTCTTGCCGGTCAGGGTC 204301
Query 199613 TTCACAAAAATTTG 199626
||||| || || ||
Sbjct 204302 TTCACGAAGATCTG 204315
Score = 93.3 bits (102), Expect = 1e-13
Identities = 81/101 (80%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| || ||||| || ||||| || |||| |||||| |||| | ||| | ||||||
Sbjct 202806 AGGACCAGATGGAGGGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 202865
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518
||||||||||| || || |||||||| | ||||||||| ||
Sbjct 202866 TCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGG 202906
>seq5167
Length=254018
Score = 113 bits (124), Expect = 1e-19
Identities = 155/217 (71%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 199410 GAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCC 199469
||||||| | ||||| || ||| | |||||||| || | ||| ||||||| |||||| |
Sbjct 220495 GAAGTCTAAACACAAGATGAAGATTTGACTCCTTCTGAATGTTATAGTCAGACAAAGTAC 220554
Query 199470 TTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTT 199529
|||||||||||| ||||| || || |||| || | ||||| || ||| ||||||||
Sbjct 220555 GTCCATCTTCCAGTTGCTTACCAGCAGAGATCAGTCTTTGCTGATCAGGAGGAATTCCTT 220614
Query 199530 CTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACG 199589
| ||||| ||||| ||| || ||| | || || | ||| || || | |
Sbjct 220615 CCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCAAGGGTTCAACCTCAAGAG 220674
Query 199590 TGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|||| ||||| ||| | | ||||| || ||||| ||
Sbjct 220675 TGATGGTCTTCCCCATAAAGGTTTTTACGAAAATCTG 220711
>seq3745
Length=218430
Score = 109 bits (120), Expect = 1e-18
Identities = 154/213 (72%), Gaps = 5/213 (2%)
Strand=Plus/Minus
Query 199410 GAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCC 199469
||||||||| ||||| || ||||| |||||||| || | |||||| |||| |||| |
Sbjct 138534 GAAGTCTCAACACAAGATGAAGAGTGGACTCCTTCTGAATGTTGTATTCAGACAAATTAT 138475
Query 199470 TTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTT 199529
|||||||||||| ||||| || || || || | |||||| || |||| ||||||||
Sbjct 138474 ATCCATCTTCCAGTTGCTTGCCAGCAAA---GACAATCTGCTGATCAGGAAGAATTCCTT 138418
Query 199530 CTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACG 199589
| ||||| ||||| ||| || ||| | || | | | || || || || |
Sbjct 138417 CCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATTAGAGGGTTTAACCTCAAAAG 138358
Query 199590 TGATCGTCTTACCCGT-GAGAGTTTTCACAAAA 199621
|||| ||||| ||| | |||||||| ||||||
Sbjct 138357 TGATGGTCTTCCCCTTAAAGAGTTTT-ACAAAA 138326
>seq1029
Length=469353
Score = 102 bits (112), Expect = 2e-16
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || ||||| | || ||||| || |||| ||||||||||| || || | ||||||
Sbjct 372766 AGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGACCATCT 372825
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|||||||| || || |||||||| | | ||||||||| || || || || ||
Sbjct 372826 TCCAGCTGTTTCCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCT 372885
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||| ||| |||| |||||| | | || || || | ||||| |||
Sbjct 372886 TGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTC 372945
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || || || |||||||| || ||
Sbjct 372946 TTGCCGGTCAGGGTCTTCACAAAGATCTG 372974
Score = 100 bits (110), Expect = 7e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
|||||| | ||| ||||| ||||| || || | ||||||||||| || || | ||||||
Sbjct 371625 CAGGACCAAGTGCAGAGTGGACTCTTTCTGAATGTTGTAGTCAGACAGGGTGCGTCCATC 371684
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
||||||||| || || || ||||| | | ||||||||| || || || || ||
Sbjct 371685 TTCCAGCTGTTTCCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGGATCCCCTCCTTGTC 371744
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
|| ||||| ||| ||| || | |||||| | | || || || | ||||| ||
Sbjct 371745 TTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGT 371804
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| || || || || ||||| || || ||
Sbjct 371805 CTTGCCGGTCAGGGTCTTCACGAAGATCTG 371834
Score = 93.3 bits (102), Expect = 1e-13
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || ||||| | || ||||| || |||| ||||||||||| || || | ||||||
Sbjct 371854 AGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGACCATCT 371913
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|||||||| || || |||||||| | | ||||||||| || || || || ||
Sbjct 371914 TCCAGCTGTTTCCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGGATCCCCTCCTTGTCT 371973
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||| ||| || | |||||| | | || || || | ||||| |||
Sbjct 371974 TGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTC 372033
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || || || ||||| || || ||
Sbjct 372034 TTGCCGGTCAGGGTCTTCACGAAGATCTG 372062
Score = 93.3 bits (102), Expect = 1e-13
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || ||||| | || ||||| || |||| ||||||||||| || || | ||||||
Sbjct 372082 AGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGACCATCT 372141
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|||||||| || || |||||||| | | ||||||||| || || || || ||
Sbjct 372142 TCCAGCTGTTTCCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCT 372201
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||| ||| || | |||||| | | || || || | ||||| |||
Sbjct 372202 TGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTC 372261
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || || || ||||| || || ||
Sbjct 372262 TTGCCGGTCAGGGTCTTCACGAAGATCTG 372290
Score = 93.3 bits (102), Expect = 1e-13
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || ||||| | || ||||| || |||| ||||||||||| || || | ||||||
Sbjct 372310 AGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGACCATCT 372369
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|||||||| || || |||||||| | | ||||||||| || || || || ||
Sbjct 372370 TCCAGCTGTTTCCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCT 372429
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||| ||| || | |||||| | | || || || | ||||| |||
Sbjct 372430 TGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTC 372489
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || || || ||||| || || ||
Sbjct 372490 TTGCCGGTCAGGGTCTTCACGAAGATCTG 372518
Score = 93.3 bits (102), Expect = 1e-13
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || ||||| | || ||||| || |||| ||||||||||| || || | ||||||
Sbjct 372538 AGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGACCATCT 372597
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|||||||| || || |||||||| | | ||||||||| || || || || ||
Sbjct 372598 TCCAGCTGTTTCCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCT 372657
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||| ||| || | |||||| | | || || || | ||||| |||
Sbjct 372658 TGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTC 372717
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || || || ||||| || || ||
Sbjct 372718 TTGCCGGTCAGGGTCTTCACGAAGATCTG 372746
>seq4376
Length=192284
Score = 93.3 bits (102), Expect = 1e-13
Identities = 151/217 (70%), Gaps = 4/217 (2%)
Strand=Plus/Plus
Query 199410 GAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCC 199469
||||||||| ||||| | |||||||||| ||| || | ||| || ||| |||| |
Sbjct 63446 GAAGTCTCAACACAAGAGGAAGAGTCGACTTCTTCTGAATGTTATAATCA----AAGTAC 63501
Query 199470 TTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTT 199529
|||||||||||| ||||| || || ||| | || | ||||| || ||| ||||||||
Sbjct 63502 ATCCATCTTCCAGTTGCTTGCCAGCAAAGGTCAGTCTTTGCTGATCAGGAGGAATTCCTT 63561
Query 199530 CTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACG 199589
| ||||| ||||| ||| || | | | || || | | ||| | || |
Sbjct 63562 CCTTATCCTGGATCTTGGCCTTTACATTTCCTATTGTATCCGAGGGTTCAATGTCAAGAA 63621
Query 199590 TGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|||| ||||| ||||| || ||||| | ||||| ||
Sbjct 63622 TGATGGTCTTTCCCGTAAGGGTTTTTATGAAAATCTG 63658
>seq1192
Length=438698
Score = 93.3 bits (102), Expect = 1e-13
Identities = 144/204 (71%), Gaps = 4/204 (2%)
Strand=Plus/Plus
Query 199410 GAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCC 199469
||||||||| ||||| ||||| |||||||| || | ||| | | | |||||| |
Sbjct 85768 GAAGTCTCAACACAAGA---AGAGTTGACTCCTTCTGAATGTTATGATGAAACAAAGTAC 85824
Query 199470 TTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTT 199529
|||||||||||| ||||| || || ||||| || | ||||| || ||| ||||||||
Sbjct 85825 GTCCATCTTCCAGTTGCTTACCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTT 85884
Query 199530 CTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACG 199589
| ||||| |||| ||| ||| ||| || |||| | ||| || || | |
Sbjct 85885 CCTTATCCTGGGTCTTGGCCTTTACGTTTTCTGTTGTATCTGAGGGTTCAACCTCAAGAG 85944
Query 199590 TGATCGTCTTACCCGTGAGAGTTT 199613
|||| ||||| ||| | || ||||
Sbjct 85945 TGATGGTCTTCCCCATAAG-GTTT 85967
>seq137
Length=1002945
Score = 93.3 bits (102), Expect = 1e-13
Identities = 102/136 (75%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 199410 GAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCC 199469
||||||||| ||||| || || | | |||| || | |||| |||||| |||||| |
Sbjct 838109 GAAGTCTCATCACAAGATGAAGCACGGGCCCCTTCTGAATGTTGCAGTCAGACAAAGTAC 838050
Query 199470 TTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTT 199529
|||||||||||| ||||| || || ||||| || | |||| || ||| |||||||
Sbjct 838049 GTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTGGCTGATCAGGAGGAATTCCTC 837990
Query 199530 CTCGCTCCTGAATCTT 199545
|| |||||| |||||
Sbjct 837989 CTTTCTCCTGGATCTT 837974
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1176210053057438
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