Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Galeopterus_20variegatus_20[refseq_20GCF_5F000696425.1_202014-06-05]
179,514 sequences; 3,187,660,572 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq1029 134 1e-26
seq633 123 2e-23
seq1701 98.7 1e-15
seq9005 95.1 1e-14
seq3013 93.3 4e-14
>seq1029
Length=469353
Score = 134 bits (148), Expect = 1e-26
Identities = 168/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || || || ||||| ||||||||| |||| |||||| |||
Sbjct 371837 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 371778
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | || |||| ||||| ||||| || ||| | |||||
Sbjct 371777 GACACCATTGAGAACG-TCAAGGCCAAGATCCAAGACAAGGAGGGGATCCCCCCTGACCA 371719
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| || | || | || || ||||||||||| || | |||||||| ||||||||
Sbjct 371718 GCAGAGGTTGATCTTTGCTGGGAAACAGCTGGAAGATGGACGCACCCTGTCTGACTACAA 371659
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||| || || || | || ||||| ||||| ||||| ||||| || ||
Sbjct 371658 CATTCAGAAAGAGTCCACTCTGCACTTGGTCCTGCGCTTGAGGGGTGG 371611
Score = 134 bits (148), Expect = 1e-26
Identities = 168/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || || || ||||| ||||||||| |||| |||||| |||
Sbjct 372065 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 372006
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | || |||| ||||| ||||| || ||| | |||||
Sbjct 372005 GACACCATTGAGAACG-TCAAGGCCAAGATCCAAGACAAGGAGGGGATCCCCCCTGACCA 371947
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| || | || | ||| || ||||||||||| || | |||||||| ||||||||
Sbjct 371946 GCAGAGGTTGATCTTCGCTGGGAAACAGCTGGAAGATGGTCGCACCCTGTCTGACTACAA 371887
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||||| || || | || |||| ||||||| ||| | ||||| ||
Sbjct 371886 CATCCAGAAAGAGTCCACCTTGCACCTGGTGCTCCGTCTCAGAGGTGG 371839
Score = 134 bits (148), Expect = 1e-26
Identities = 168/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || || || ||||| ||||||||| |||| |||||| |||
Sbjct 372293 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 372234
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | || |||| ||||| ||||| || ||| | |||||
Sbjct 372233 GACACCATTGAGAACG-TCAAGGCCAAGATCCAAGACAAGGAGGGCATCCCCCCTGACCA 372175
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| || | || | ||| || ||||||||||| || | |||||||| ||||||||
Sbjct 372174 GCAGAGGTTGATCTTCGCTGGGAAACAGCTGGAAGATGGTCGCACCCTGTCTGACTACAA 372115
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||||| || || | || |||| ||||||| ||| | ||||| ||
Sbjct 372114 CATCCAGAAAGAGTCCACCTTGCACCTGGTGCTCCGTCTCAGAGGTGG 372067
Score = 134 bits (148), Expect = 1e-26
Identities = 168/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || || || ||||| ||||||||| |||| |||||| |||
Sbjct 372521 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 372462
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | || |||| ||||| ||||| || ||| | |||||
Sbjct 372461 GACACCATTGAGAACG-TCAAGGCCAAGATCCAAGACAAGGAGGGCATCCCCCCTGACCA 372403
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| || | || | ||| || ||||||||||| || | |||||||| ||||||||
Sbjct 372402 GCAGAGGTTGATCTTCGCTGGGAAACAGCTGGAAGATGGTCGCACCCTGTCTGACTACAA 372343
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||||| || || | || |||| ||||||| ||| | ||||| ||
Sbjct 372342 CATCCAGAAAGAGTCCACCTTGCACCTGGTGCTCCGTCTCAGAGGTGG 372295
Score = 134 bits (148), Expect = 1e-26
Identities = 168/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || || || ||||| ||||||||| |||| |||||| |||
Sbjct 372749 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 372690
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | || |||| ||||| ||||| || ||| | |||||
Sbjct 372689 GACACCATTGAGAACG-TCAAGGCCAAGATCCAAGACAAGGAGGGCATCCCCCCTGACCA 372631
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| || | || | ||| || ||||||||||| || | |||||||| ||||||||
Sbjct 372630 GCAGAGGTTGATCTTCGCTGGGAAACAGCTGGAAGATGGTCGCACCCTGTCTGACTACAA 372571
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||||| || || | || |||| ||||||| ||| | ||||| ||
Sbjct 372570 CATCCAGAAAGAGTCCACCTTGCACCTGGTGCTCCGTCTCAGAGGTGG 372523
Score = 131 bits (144), Expect = 2e-25
Identities = 168/229 (73%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 38243 aaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302
|||||| || || || || || || || ||||| ||||||||| |||| |||||| |||
Sbjct 372978 AATGCAGATCTTTGTGAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTCGAGCCCAG 372919
Query 38303 CGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361
|||| | | | |||| | || | || |||| ||||| ||||| || ||| | ||||
Sbjct 372918 TGACACCATCGAGAACG-TCAAGGCCAAGATCCAAGACAAGGAGGGCATCCCCCCTGACC 372860
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
| ||| || | || | ||| || ||||||||||| || | |||||||| |||||||
Sbjct 372859 AGCAGAGGTTGATCTTCGCTGGGAAACAGCTGGAAGATGGTCGCACCCTGTCTGACTACA 372800
Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||||| || || | || |||| ||||||| ||| | ||||| ||
Sbjct 372799 ACATCCAGAAAGAGTCCACCTTGCACCTGGTGCTCCGTCTCAGAGGTGG 372751
>seq633
Length=582679
Score = 123 bits (136), Expect = 2e-23
Identities = 175/247 (71%), Gaps = 7/247 (3%)
Strand=Plus/Minus
Query 38231 ACTCTTTaaaa-------aaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCA 38283
||||||||||| |||||||||| ||||| || || || || ||||| |||||||
Sbjct 204566 ACTCTTTAAAATAGGTCAAAATGCAAATTTTCGTGAAGACTCTGACCGGCAAGACCATCA 204507
Query 38284 CCGTCGACGTCGAGGCCACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAG 38343
|| | || || ||| ||| |||| | | | | | || | || |||| || ||||
Sbjct 204506 CCCTGGAAGTGGAGCCCAGTGACACCATCGAGAATGTGAAGGCCAAGATCCAGGATAAAG 204447
Query 38344 AGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGC 38403
| || || ||| | ||||| ||| ||||||| | || ||||| |||||||| || | |
Sbjct 204446 AAGGCATCCCCCCTGACCAGCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCC 204387
Query 38404 GCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGA 38463
|||| || || ||||||||||| || || | || |||| ||||||| ||| | |
Sbjct 204386 GCACTCTTTCTGATTACAACATCCAGAAAGAGTCCACCTTGCACCTGGTGCTCCGTCTCA 204327
Query 38464 GAGGCGG 38470
|||| ||
Sbjct 204326 GAGGTGG 204320
Score = 102 bits (112), Expect = 8e-17
Identities = 137/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || || || ||||| ||||||||| | || || ||| |||
Sbjct 204318 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAAGTGGAGCCCAGT 204259
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | || | || |||| || ||||| || || ||| | |||||
Sbjct 204258 GACACCATCGAGAATGTGAAGGCCAAGATCCAGGATAAAGAAGGCATCCCCCCTGACCAG 204199
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||| ||||||| | || ||||| |||||||| || | ||||| || |||||||||
Sbjct 204198 CAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGACTACAAC 204139
Query 38424 ATCCAAAAGGA 38434
||||| || ||
Sbjct 204138 ATCCAGAAAGA 204128
>seq1701
Length=366390
Score = 98.7 bits (108), Expect = 1e-15
Identities = 151/213 (71%), Gaps = 3/213 (1%)
Strand=Plus/Plus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||| | || ||||| || || | |||||| ||||| || |||| ||| || |||
Sbjct 285410 ATGCAA-TCTTTGTAAAGACCCTGATGGGCAAGACCATTTCCCTCGAGGTCAAGCCCAGT 285468
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||||| | | | | | | ||||||| ||||| ||||| ||||| | ||| |
Sbjct 285469 GACAGCATCGAGAATGTCA--GTCAAAATCCAAGACAAGGAGGGCATTCCACCTGACTAG 285526
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
| || || || | ||||||||||||||||| || | ||| || |||||||||
Sbjct 285527 CCACGTCTGATGTTTGCGGGCAAACAGCTGGAGGATGGCTACACTCTTTCAGACTACAAC 285586
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456
| ||| ||||| | || ||||| |||||||||
Sbjct 285587 AGCCAGAAGGAGTCCACCCTGCACTTGGTGCTG 285619
Score = 87.8 bits (96), Expect = 2e-12
Identities = 132/187 (71%), Gaps = 2/187 (1%)
Strand=Plus/Plus
Query 38270 GGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCAAACGCTTAAAGAAAA 38329
|||||| ||||| || |||| ||| || ||| |||||| | | | | | | ||
Sbjct 286129 GGGCAAGACCATTTCCCTCGAGGTCAAGCCCAGTGACAGCATCGAGAATGTCA--GTCAA 286186
Query 38330 AATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACA 38389
||||| ||||| ||||| ||||| | ||| | | || || || | |||||||||||
Sbjct 286187 AATCCAAGACAAGGAGGGCATTCCACCTGACTAGCCACGTCTGATGTTTGCGGGCAAACA 286246
Query 38390 GCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTT 38449
|||||| || | ||| || |||||||||| ||| ||||| | || ||||| ||
Sbjct 286247 GCTGGAGGATGGCTACACTCTTTCAGACTACAACAGCCAGAAGGAGTCCACCCTGCACTT 286306
Query 38450 GGTGCTG 38456
|||||||
Sbjct 286307 GGTGCTG 286313
>seq9005
Length=82358
Score = 95.1 bits (104), Expect = 1e-14
Identities = 150/214 (70%), Gaps = 1/214 (0%)
Strand=Plus/Minus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || | || | |||||||| ||||||||| | || |||||| |||
Sbjct 12548 ATGCAGATCTTTGTGGAGACCTTGACGGGCAAGACCATCACCTT-GAGGTCGAGCCCAGT 12490
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | || | ||| ||| ||||| ||||| || || || |||||
Sbjct 12489 GACACCATCAAGAATGTCAACGCCAAAGTCCAAGACAAGGAGGGCATCCCAGCTGACCAG 12430
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
|||| || || | ||||||||||||||||| || | | ||| || |||||||||
Sbjct 12429 CAGCATCTGATATTTGCGGGCAAACAGCTGGAGGATGGCCACACTCTTTCAGACTACAAC 12370
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGC 38457
|||| | || | || ||| ||||||||||
Sbjct 12369 GTCCAGGAAGAGTCCACCCTGTCCTTGGTGCTGC 12336
>seq3013
Length=259453
Score = 93.3 bits (102), Expect = 4e-14
Identities = 89/114 (78%), Gaps = 0/114 (0%)
Strand=Plus/Plus
Query 133396 ACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACATACTCCACATGTCCGAA 133455
||||||||| | |||||||| || ||||| ||||| || ||||| ||| |||||
Sbjct 188194 ACCTCCTCGGCTGTCCAAAAGGAAGCCTCCGCTTTCTTATACATTTGCCAAATGTCGTGG 188253
Query 133456 TATTGTATGGGAAAAATCACAAACCGGCGGGGGTTTTCGCGCAACAGCGGCTCC 133509
|| | |||||||| | ||||| |||||||||||||| | || ||||||||||
Sbjct 188254 TACTCGATGGGAAAGACGACAAAGCGGCGGGGGTTTTCTCTCAGCAGCGGCTCC 188307
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499050449749760
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