Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galeopterus_20variegatus_20[refseq_20GCF_5F000696425.1_202014-06-05] 179,514 sequences; 3,187,660,572 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq633 154 3e-32 seq5167 123 6e-23 seq1029 123 6e-23 seq50868 100 6e-16 seq19457 100 6e-16 seq3745 84.2 5e-11 >seq633 Length=582679 Score = 154 bits (170), Expect = 3e-32 Identities = 171/227 (75%), Gaps = 6/227 (3%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 |||||| | | || ||||| | ||||||||||| || || |||||||| | |||||| Sbjct 204325 TCTGAGACGGAGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGT 204384 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | |||||||| |||||||| ||||| ||||| || | || ||||| || || ||||| Sbjct 204385 GCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCC 204444 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTC 195095 |||||| || || || || ||| || ||||| |||||||| ||| |||||||| Sbjct 204445 TTCTTTATCCTGGATCTTGGCCTTCACATTCTCGATGGTGTC---ACTGGGCTCCACTTC 204501 Query 195096 AAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142 ||||| | ||||| || |||| ||| || ||||| | |||||||| Sbjct 204502 CAGGGTGATGGTCTTGCCGGTCAGAGTCTTCACGAAAATTTGCATTT 204548 Score = 132 bits (146), Expect = 1e-25 Identities = 150/200 (75%), Gaps = 6/200 (3%) Strand=Plus/Plus Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003 ||||||||||| || || ||||| || | |||||| | |||||||| |||||||| ||| Sbjct 204122 GTGGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCT 204181 Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063 || ||||| || | || ||||| || || ||||||||||| || || || || ||| Sbjct 204182 GCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCTTTATCCTGGATCTTGGCCTTC 204241 Query 195064 ACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAA 195120 || ||||| |||||||| ||| |||||||| ||||| | ||||| || |||| Sbjct 204242 ACATTCTCGATGGTGTC---ACTGGGCTCCACTTCCAGGGTGATGGTCTTGCCGGTCAGG 204298 Query 195121 GTTTTTACGAACACTTGCAT 195140 || || ||||| | ||||| Sbjct 204299 GTCTTCACGAAGATCTGCAT 204318 Score = 84.2 bits (92), Expect = 5e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || || || ||||||||||| || || |||||||| | |||||| | |||||||| Sbjct 202809 ACCAGATGGAGGGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCC 202868 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGG 195032 |||||||| ||||| ||||| || | || ||||| || || Sbjct 202869 AGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGG 202909 >seq5167 Length=254018 Score = 123 bits (136), Expect = 6e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 ||||| || ||||| |||||| | ||||| || ||||| || || || | | ||| | Sbjct 220497 AGTCTAAACACAAGATGAAGATTTGACTCCTTCTGAATGTTATAGTCAGACAAAGTACGT 220556 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 |||||||| || |||||||| || |||| |||| ||| || || |||||||| ||||| Sbjct 220557 CCATCTTCCAGTTGCTTACCAGCAGAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCC 220616 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 || || || || || ||| || || || || || ||| | ||| || ||||| || Sbjct 220617 TTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCAAGGGTTCAACCTCAAGAGTG 220676 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | ||||| || | || ||||||||||| | ||||| Sbjct 220677 ATGGTCTTCCCCATAAAGGTTTTTACGAAAATCTGCAT 220714 >seq1029 Length=469353 Score = 123 bits (136), Expect = 6e-23 Identities = 163/225 (72%), Gaps = 6/225 (3%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 |||||| | | || ||||| | ||||||||||| || || ||||| || | || || Sbjct 372072 TCTGAGACGGAGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGT 372131 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | |||||||| ||||| || || |||||||| | | || ||||| || || ||||| Sbjct 372132 GCGACCATCTTCCAGCTGTTTCCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGGATGCC 372191 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTC 195095 || |||||||| || || ||||||||||||||||||||| ||| || || || Sbjct 372192 CTCCTTGTCTTGGATCTTGGCCTTGACGTTCTCAATGGTGTC---ACTGGGCTCGACCTC 372248 Query 195096 AAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| | ||||| || |||| || || ||||| | ||||| Sbjct 372249 GAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 372293 Score = 123 bits (136), Expect = 6e-23 Identities = 163/225 (72%), Gaps = 6/225 (3%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 |||||| | | || ||||| | ||||||||||| || || ||||| || | || || Sbjct 372300 TCTGAGACGGAGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGT 372359 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | |||||||| ||||| || || |||||||| | | || ||||| || || ||||| Sbjct 372360 GCGACCATCTTCCAGCTGTTTCCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGGATGCC 372419 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTC 195095 || |||||||| || || ||||||||||||||||||||| ||| || || || Sbjct 372420 CTCCTTGTCTTGGATCTTGGCCTTGACGTTCTCAATGGTGTC---ACTGGGCTCGACCTC 372476 Query 195096 AAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| | ||||| || |||| || || ||||| | ||||| Sbjct 372477 GAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 372521 Score = 123 bits (136), Expect = 6e-23 Identities = 163/225 (72%), Gaps = 6/225 (3%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 |||||| | | || ||||| | ||||||||||| || || ||||| || | || || Sbjct 372528 TCTGAGACGGAGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGT 372587 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | |||||||| ||||| || || |||||||| | | || ||||| || || ||||| Sbjct 372588 GCGACCATCTTCCAGCTGTTTCCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGGATGCC 372647 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTC 195095 || |||||||| || || ||||||||||||||||||||| ||| || || || Sbjct 372648 CTCCTTGTCTTGGATCTTGGCCTTGACGTTCTCAATGGTGTC---ACTGGGCTCGACCTC 372704 Query 195096 AAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| | ||||| || |||| || || ||||| | ||||| Sbjct 372705 GAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 372749 Score = 122 bits (134), Expect = 2e-22 Identities = 152/207 (73%), Gaps = 6/207 (3%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| |||||||||||||| ||||| ||||| || | || || | |||||||| ||||| Sbjct 371634 GTGCAGAGTGGACTCTTTCTGAATGTTGTAGTCAGACAGGGTGCGTCCATCTTCCAGCTG 371693 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 || || || ||||| | | || ||||| || || || || || |||||||| || || Sbjct 371694 TTTCCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGGATCCCCTCCTTGTCTTGGATCTT 371753 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTCTTTCC 195113 ||||||||||||||||||||| ||| || || || ||||| | ||||| || Sbjct 371754 GGCCTTGACGTTCTCAATGGTGTC---ACTGGGCTCGACCTCGAGGGTGATGGTCTTGCC 371810 Query 195114 TGTCAAAGTTTTTACGAACACTTGCAT 195140 |||| || || ||||| | ||||| Sbjct 371811 GGTCAGGGTCTTCACGAAGATCTGCAT 371837 Score = 118 bits (130), Expect = 2e-21 Identities = 162/225 (72%), Gaps = 6/225 (3%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 |||||| | | || ||||| | ||||||||||| || || ||||| || | || || Sbjct 371844 TCTGAGACGGAGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGT 371903 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | |||||||| ||||| || || |||||||| | | || ||||| || || || || Sbjct 371904 GCGACCATCTTCCAGCTGTTTCCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGGATCCC 371963 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTC 195095 || |||||||| || || ||||||||||||||||||||| ||| || || || Sbjct 371964 CTCCTTGTCTTGGATCTTGGCCTTGACGTTCTCAATGGTGTC---ACTGGGCTCGACCTC 372020 Query 195096 AAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| | ||||| || |||| || || ||||| | ||||| Sbjct 372021 GAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 372065 Score = 116 bits (128), Expect = 8e-21 Identities = 162/226 (72%), Gaps = 6/226 (3%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 |||||| | | || ||||| | ||||||||||| || || ||||| || | || || Sbjct 372756 TCTGAGACGGAGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGT 372815 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | |||||||| ||||| || || |||||||| | | || ||||| || || ||||| Sbjct 372816 GCGACCATCTTCCAGCTGTTTCCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGGATGCC 372875 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTC 195095 || |||||||| || || |||||||||||| |||||||| ||| || || || Sbjct 372876 CTCCTTGTCTTGGATCTTGGCCTTGACGTTCTCGATGGTGTC---ACTGGGCTCGACCTC 372932 Query 195096 AAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 ||||| | ||||| || |||| || || || || | |||||| Sbjct 372933 GAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACAAAGATCTGCATT 372978 >seq50868 Length=3469 Score = 100 bits (110), Expect = 6e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 |||||||| ||||| || ||||| || || || | | ||| | ||||||||||| ||| Sbjct 2098 TGAAGAGTTGACTCCTTCTGAATGTTATAGTCAGACAAAGTACATCCATCTTCGAGGTGC 2039 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 ||||| || ||||| |||| ||| || || |||||||| ||||| || || || || || Sbjct 2038 TTACCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTA 1979 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 ||| || || || || || || || ||| ||||| || | ||| | || | Sbjct 1978 GCCTTTACATTTTCTATTGTATCTGAGGGTTCAGACTCAAGAGTGATAGTCCTCCCCATA 1919 Query 195118 AAAGTTTTTACGAACACTTGCAT 195140 | ||||||| ||| | ||||| Sbjct 1918 AGGGTTTTTATGAAAATCTGCAT 1896 >seq19457 Length=14611 Score = 100 bits (110), Expect = 6e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 |||||||| ||||| || ||||| || || || | | ||| | ||||||||||| ||| Sbjct 1949 TGAAGAGTTGACTCCTTCTGAATGTTATAGTCAGACAAAGTACATCCATCTTCGAGGTGC 2008 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 ||||| || ||||| |||| ||| || || |||||||| ||||| || || || || || Sbjct 2009 TTACCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTA 2068 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 ||| || || || || || || || ||| ||||| || | ||| | || | Sbjct 2069 GCCTTTACATTTTCTATTGTATCTGAGGGTTCAGACTCAAGAGTGATAGTCCTCCCCATA 2128 Query 195118 AAAGTTTTTACGAACACTTGCAT 195140 | ||||||| ||| | ||||| Sbjct 2129 AGGGTTTTTATGAAAATCTGCAT 2151 >seq3745 Length=218430 Score = 84.2 bits (92), Expect = 5e-11 Identities = 113/155 (73%), Gaps = 3/155 (2%) Strand=Plus/Minus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 |||||||| ||||| |||||||||||||| || ||||| ||||| || | | | | Sbjct 138532 AGTCTCAACACAAGATGAAGAGTGGACTCCTTCTGAATGTTGTATTCAGACAAATTATAT 138473 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 |||||||| || ||||| || || |||| || || || || || ||| |||| ||||| Sbjct 138472 CCATCTTCCAGTTGCTTGCCAGCAAAGACAA-TC--TGCTGATCAGGAAGAATTCCTTCC 138416 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGT 195077 || || || || || ||| || || || || || Sbjct 138415 TTATCCTGGATCTTGGCCTTTACATTTTCTATTGT 138381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1106929766663238