Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Galeopterus_20variegatus_20[refseq_20GCF_5F000696425.1_202014-06-05]
179,514 sequences; 3,187,660,572 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq633 154 3e-32
seq5167 123 6e-23
seq1029 123 6e-23
seq50868 100 6e-16
seq19457 100 6e-16
seq3745 84.2 5e-11
>seq633
Length=582679
Score = 154 bits (170), Expect = 3e-32
Identities = 171/227 (75%), Gaps = 6/227 (3%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
|||||| | | || ||||| | ||||||||||| || || |||||||| | ||||||
Sbjct 204325 TCTGAGACGGAGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGT 204384
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
| |||||||| |||||||| ||||| ||||| || | || ||||| || || |||||
Sbjct 204385 GCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCC 204444
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTC 195095
|||||| || || || || ||| || ||||| |||||||| ||| ||||||||
Sbjct 204445 TTCTTTATCCTGGATCTTGGCCTTCACATTCTCGATGGTGTC---ACTGGGCTCCACTTC 204501
Query 195096 AAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142
||||| | ||||| || |||| ||| || ||||| | ||||||||
Sbjct 204502 CAGGGTGATGGTCTTGCCGGTCAGAGTCTTCACGAAAATTTGCATTT 204548
Score = 132 bits (146), Expect = 1e-25
Identities = 150/200 (75%), Gaps = 6/200 (3%)
Strand=Plus/Plus
Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003
||||||||||| || || ||||| || | |||||| | |||||||| |||||||| |||
Sbjct 204122 GTGGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCT 204181
Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063
|| ||||| || | || ||||| || || ||||||||||| || || || || |||
Sbjct 204182 GCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCTTTATCCTGGATCTTGGCCTTC 204241
Query 195064 ACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAA 195120
|| ||||| |||||||| ||| |||||||| ||||| | ||||| || ||||
Sbjct 204242 ACATTCTCGATGGTGTC---ACTGGGCTCCACTTCCAGGGTGATGGTCTTGCCGGTCAGG 204298
Query 195121 GTTTTTACGAACACTTGCAT 195140
|| || ||||| | |||||
Sbjct 204299 GTCTTCACGAAGATCTGCAT 204318
Score = 84.2 bits (92), Expect = 5e-11
Identities = 79/101 (78%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| || || || ||||||||||| || || |||||||| | |||||| | ||||||||
Sbjct 202809 ACCAGATGGAGGGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCC 202868
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGG 195032
|||||||| ||||| ||||| || | || ||||| || ||
Sbjct 202869 AGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGG 202909
>seq5167
Length=254018
Score = 123 bits (136), Expect = 6e-23
Identities = 158/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982
||||| || ||||| |||||| | ||||| || ||||| || || || | | ||| |
Sbjct 220497 AGTCTAAACACAAGATGAAGATTTGACTCCTTCTGAATGTTATAGTCAGACAAAGTACGT 220556
Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042
|||||||| || |||||||| || |||| |||| ||| || || |||||||| |||||
Sbjct 220557 CCATCTTCCAGTTGCTTACCAGCAGAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCC 220616
Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102
|| || || || || ||| || || || || || ||| | ||| || ||||| ||
Sbjct 220617 TTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCAAGGGTTCAACCTCAAGAGTG 220676
Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
| ||||| || | || ||||||||||| | |||||
Sbjct 220677 ATGGTCTTCCCCATAAAGGTTTTTACGAAAATCTGCAT 220714
>seq1029
Length=469353
Score = 123 bits (136), Expect = 6e-23
Identities = 163/225 (72%), Gaps = 6/225 (3%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
|||||| | | || ||||| | ||||||||||| || || ||||| || | || ||
Sbjct 372072 TCTGAGACGGAGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGT 372131
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
| |||||||| ||||| || || |||||||| | | || ||||| || || |||||
Sbjct 372132 GCGACCATCTTCCAGCTGTTTCCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGGATGCC 372191
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTC 195095
|| |||||||| || || ||||||||||||||||||||| ||| || || ||
Sbjct 372192 CTCCTTGTCTTGGATCTTGGCCTTGACGTTCTCAATGGTGTC---ACTGGGCTCGACCTC 372248
Query 195096 AAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||||| | ||||| || |||| || || ||||| | |||||
Sbjct 372249 GAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 372293
Score = 123 bits (136), Expect = 6e-23
Identities = 163/225 (72%), Gaps = 6/225 (3%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
|||||| | | || ||||| | ||||||||||| || || ||||| || | || ||
Sbjct 372300 TCTGAGACGGAGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGT 372359
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
| |||||||| ||||| || || |||||||| | | || ||||| || || |||||
Sbjct 372360 GCGACCATCTTCCAGCTGTTTCCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGGATGCC 372419
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTC 195095
|| |||||||| || || ||||||||||||||||||||| ||| || || ||
Sbjct 372420 CTCCTTGTCTTGGATCTTGGCCTTGACGTTCTCAATGGTGTC---ACTGGGCTCGACCTC 372476
Query 195096 AAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||||| | ||||| || |||| || || ||||| | |||||
Sbjct 372477 GAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 372521
Score = 123 bits (136), Expect = 6e-23
Identities = 163/225 (72%), Gaps = 6/225 (3%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
|||||| | | || ||||| | ||||||||||| || || ||||| || | || ||
Sbjct 372528 TCTGAGACGGAGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGT 372587
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
| |||||||| ||||| || || |||||||| | | || ||||| || || |||||
Sbjct 372588 GCGACCATCTTCCAGCTGTTTCCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGGATGCC 372647
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTC 195095
|| |||||||| || || ||||||||||||||||||||| ||| || || ||
Sbjct 372648 CTCCTTGTCTTGGATCTTGGCCTTGACGTTCTCAATGGTGTC---ACTGGGCTCGACCTC 372704
Query 195096 AAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||||| | ||||| || |||| || || ||||| | |||||
Sbjct 372705 GAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 372749
Score = 122 bits (134), Expect = 2e-22
Identities = 152/207 (73%), Gaps = 6/207 (3%)
Strand=Plus/Plus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| |||||||||||||| ||||| ||||| || | || || | |||||||| |||||
Sbjct 371634 GTGCAGAGTGGACTCTTTCTGAATGTTGTAGTCAGACAGGGTGCGTCCATCTTCCAGCTG 371693
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
|| || || ||||| | | || ||||| || || || || || |||||||| || ||
Sbjct 371694 TTTCCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGGATCCCCTCCTTGTCTTGGATCTT 371753
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTCTTTCC 195113
||||||||||||||||||||| ||| || || || ||||| | ||||| ||
Sbjct 371754 GGCCTTGACGTTCTCAATGGTGTC---ACTGGGCTCGACCTCGAGGGTGATGGTCTTGCC 371810
Query 195114 TGTCAAAGTTTTTACGAACACTTGCAT 195140
|||| || || ||||| | |||||
Sbjct 371811 GGTCAGGGTCTTCACGAAGATCTGCAT 371837
Score = 118 bits (130), Expect = 2e-21
Identities = 162/225 (72%), Gaps = 6/225 (3%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
|||||| | | || ||||| | ||||||||||| || || ||||| || | || ||
Sbjct 371844 TCTGAGACGGAGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGT 371903
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
| |||||||| ||||| || || |||||||| | | || ||||| || || || ||
Sbjct 371904 GCGACCATCTTCCAGCTGTTTCCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGGATCCC 371963
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTC 195095
|| |||||||| || || ||||||||||||||||||||| ||| || || ||
Sbjct 371964 CTCCTTGTCTTGGATCTTGGCCTTGACGTTCTCAATGGTGTC---ACTGGGCTCGACCTC 372020
Query 195096 AAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||||| | ||||| || |||| || || ||||| | |||||
Sbjct 372021 GAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 372065
Score = 116 bits (128), Expect = 8e-21
Identities = 162/226 (72%), Gaps = 6/226 (3%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
|||||| | | || ||||| | ||||||||||| || || ||||| || | || ||
Sbjct 372756 TCTGAGACGGAGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGT 372815
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
| |||||||| ||||| || || |||||||| | | || ||||| || || |||||
Sbjct 372816 GCGACCATCTTCCAGCTGTTTCCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGGATGCC 372875
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTC 195095
|| |||||||| || || |||||||||||| |||||||| ||| || || ||
Sbjct 372876 CTCCTTGTCTTGGATCTTGGCCTTGACGTTCTCGATGGTGTC---ACTGGGCTCGACCTC 372932
Query 195096 AAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141
||||| | ||||| || |||| || || || || | ||||||
Sbjct 372933 GAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACAAAGATCTGCATT 372978
>seq50868
Length=3469
Score = 100 bits (110), Expect = 6e-16
Identities = 144/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997
|||||||| ||||| || ||||| || || || | | ||| | ||||||||||| |||
Sbjct 2098 TGAAGAGTTGACTCCTTCTGAATGTTATAGTCAGACAAAGTACATCCATCTTCGAGGTGC 2039
Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057
||||| || ||||| |||| ||| || || |||||||| ||||| || || || || ||
Sbjct 2038 TTACCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTA 1979
Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117
||| || || || || || || || ||| ||||| || | ||| | || |
Sbjct 1978 GCCTTTACATTTTCTATTGTATCTGAGGGTTCAGACTCAAGAGTGATAGTCCTCCCCATA 1919
Query 195118 AAAGTTTTTACGAACACTTGCAT 195140
| ||||||| ||| | |||||
Sbjct 1918 AGGGTTTTTATGAAAATCTGCAT 1896
>seq19457
Length=14611
Score = 100 bits (110), Expect = 6e-16
Identities = 144/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997
|||||||| ||||| || ||||| || || || | | ||| | ||||||||||| |||
Sbjct 1949 TGAAGAGTTGACTCCTTCTGAATGTTATAGTCAGACAAAGTACATCCATCTTCGAGGTGC 2008
Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057
||||| || ||||| |||| ||| || || |||||||| ||||| || || || || ||
Sbjct 2009 TTACCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTA 2068
Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117
||| || || || || || || || ||| ||||| || | ||| | || |
Sbjct 2069 GCCTTTACATTTTCTATTGTATCTGAGGGTTCAGACTCAAGAGTGATAGTCCTCCCCATA 2128
Query 195118 AAAGTTTTTACGAACACTTGCAT 195140
| ||||||| ||| | |||||
Sbjct 2129 AGGGTTTTTATGAAAATCTGCAT 2151
>seq3745
Length=218430
Score = 84.2 bits (92), Expect = 5e-11
Identities = 113/155 (73%), Gaps = 3/155 (2%)
Strand=Plus/Minus
Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982
|||||||| ||||| |||||||||||||| || ||||| ||||| || | | | |
Sbjct 138532 AGTCTCAACACAAGATGAAGAGTGGACTCCTTCTGAATGTTGTATTCAGACAAATTATAT 138473
Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042
|||||||| || ||||| || || |||| || || || || || ||| |||| |||||
Sbjct 138472 CCATCTTCCAGTTGCTTGCCAGCAAAGACAA-TC--TGCTGATCAGGAAGAATTCCTTCC 138416
Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGT 195077
|| || || || || ||| || || || || ||
Sbjct 138415 TTATCCTGGATCTTGGCCTTTACATTTTCTATTGT 138381
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1106929766663238
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