Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Galeopterus_20variegatus_20[refseq_20GCF_5F000696425.1_202014-06-05]
179,514 sequences; 3,187,660,572 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq1029 143 2e-29
seq633 91.5 1e-13
seq9005 87.8 1e-12
seq1701 84.2 1e-11
>seq1029
Length=469353
Score = 143 bits (158), Expect = 2e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814
|| |||||||| | || |||||||| | ||| |||||||||||||| ||||| ||
Sbjct 371611 CCACCCCTCAAGCGCAGGACCAAGTGCAGAGTGGACTCTTTCTGAATGTTGTAGTCAGAC 371670
Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874
||| | ||| |||| ||||||||||| || ||||| || | | |||||||| | ||
Sbjct 371671 AGGGTGCGTCCATCTTCCAGCTGTTTCCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGG 371730
Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934
| |||||||||||| ||||| |||||| | || | |||| || ||| ||
Sbjct 371731 ATCCCCTCCTTGTCTTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCGACC 371790
Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
|||| ||| ||||| || || || || |||||||| |||||||||||
Sbjct 371791 TCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 371837
Score = 116 bits (128), Expect = 2e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||| ||| | ||| |||||||| ||||| ||||| || ||| | || |||| |||
Sbjct 371857 ACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGACCATCTTCC 371916
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
|||||||| || || || || | | |||||||| | || | ||||||||||||
Sbjct 371917 AGCTGTTTCCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGGATCCCCTCCTTGTCTTGG 371976
Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952
||||| |||||| | || | |||| || ||| || |||| ||| ||||| ||
Sbjct 371977 ATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTG 372036
Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
|| || || |||||||| |||||||||||
Sbjct 372037 CCGGTCAGGGTCTTCACGAAGATCTGCAT 372065
Score = 116 bits (128), Expect = 2e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||| ||| | ||| |||||||| ||||| ||||| || ||| | || |||| |||
Sbjct 372769 ACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGACCATCTTCC 372828
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
|||||||| || || || || | | |||||||| | || | |||||||||||
Sbjct 372829 AGCTGTTTCCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCTTGG 372888
Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952
||||| |||||| | || | |||| || ||| || |||| ||| ||||| ||
Sbjct 372889 ATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTG 372948
Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
|| || || ||||||||||||||||||||
Sbjct 372949 CCGGTCAGGGTCTTCACAAAGATCTGCAT 372977
Score = 111 bits (122), Expect = 1e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||| ||| | ||| |||||||| ||||| ||||| || ||| | || |||| |||
Sbjct 372085 ACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGACCATCTTCC 372144
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
|||||||| || || || || | | |||||||| | || | |||||||||||
Sbjct 372145 AGCTGTTTCCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCTTGG 372204
Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952
||||| |||||| | || | |||| || ||| || |||| ||| ||||| ||
Sbjct 372205 ATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTG 372264
Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
|| || || |||||||| |||||||||||
Sbjct 372265 CCGGTCAGGGTCTTCACGAAGATCTGCAT 372293
Score = 111 bits (122), Expect = 1e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||| ||| | ||| |||||||| ||||| ||||| || ||| | || |||| |||
Sbjct 372313 ACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGACCATCTTCC 372372
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
|||||||| || || || || | | |||||||| | || | |||||||||||
Sbjct 372373 AGCTGTTTCCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCTTGG 372432
Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952
||||| |||||| | || | |||| || ||| || |||| ||| ||||| ||
Sbjct 372433 ATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTG 372492
Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
|| || || |||||||| |||||||||||
Sbjct 372493 CCGGTCAGGGTCTTCACGAAGATCTGCAT 372521
Score = 111 bits (122), Expect = 1e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||| ||| | ||| |||||||| ||||| ||||| || ||| | || |||| |||
Sbjct 372541 ACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGACCATCTTCC 372600
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
|||||||| || || || || | | |||||||| | || | |||||||||||
Sbjct 372601 AGCTGTTTCCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCTTGG 372660
Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952
||||| |||||| | || | |||| || ||| || |||| ||| ||||| ||
Sbjct 372661 ATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTG 372720
Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
|| || || |||||||| |||||||||||
Sbjct 372721 CCGGTCAGGGTCTTCACGAAGATCTGCAT 372749
>seq633
Length=582679
Score = 91.5 bits (100), Expect = 1e-13
Identities = 137/193 (71%), Gaps = 4/193 (2%)
Strand=Plus/Plus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|||||||| ||||| ||||| ||||| | || |||| |||||||| || || |||||
Sbjct 204128 TCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAG 204187
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || | |||||||| | || | || || || || ||||| || || ||
Sbjct 204188 ATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCTTTATCCTGGATCTTGGCCTTCAC--AT 204245
Query 34911 GCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCA 34968
|| || | |||| || ||| || || | ||| ||||| || || || || |||||||
Sbjct 204246 TCTCGATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCA 204305
Query 34969 CAAAGATCTGCAT 34981
| |||||||||||
Sbjct 204306 CGAAGATCTGCAT 204318
Score = 84.2 bits (92), Expect = 1e-11
Identities = 148/214 (69%), Gaps = 4/214 (2%)
Strand=Plus/Plus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||| ||| | ||| |||||||| ||||| || || ||||| | || |||| |||
Sbjct 204338 ACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCC 204397
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
||||| || || ||||| || || | |||||||| | || | || || || ||
Sbjct 204398 AGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCTTTATCCTGG 204457
Query 34893 ATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTT 34950
||||| || || || || || | |||| || ||| || || | ||| ||||| |
Sbjct 204458 ATCTTGGCCTTCAC--ATTCTCGATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTCT 204515
Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984
| || || ||||||||||| || || ||||| ||
Sbjct 204516 TGCCGGTCAGAGTCTTCACGAAAATTTGCATTTT 204549
>seq9005
Length=82358
Score = 87.8 bits (96), Expect = 1e-12
Identities = 137/193 (71%), Gaps = 5/193 (3%)
Strand=Plus/Plus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|||| ||| | ||| ||||| ||||| | | |||| ||||||||||| || ||||||
Sbjct 12359 TCTTCCTGGACGTTGTAGTCTGAAAGAGTGTGGCCATCCTCCAGCTGTTTGCCCGCAAAT 12418
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || | |||||||| || | ||||||||||| | || ||||| ||
Sbjct 12419 ATCAGATGCTGCTGGTCAGCTGGGATGCCCTCCTTGTCTTGGACTTTGGCGTTGAC--AT 12476
Query 34911 GCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCA 34968
|| || | |||| || ||| || || | ||| ||||| || ||||| | |||| ||
Sbjct 12477 TCTTGATGGTGTCACTGGGCTCGACCTC-AAGGTGATGGTCTTGCCCGTCAAGGTCTCCA 12535
Query 34969 CAAAGATCTGCAT 34981
|||||||||||||
Sbjct 12536 CAAAGATCTGCAT 12548
>seq1701
Length=366390
Score = 84.2 bits (92), Expect = 1e-11
Identities = 147/213 (69%), Gaps = 11/213 (5%)
Strand=Plus/Minus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||||||| | ||| || ||||| |||| ||||| ||||| | |||| |||
Sbjct 285615 ACCAAGTGCAGGGTGGACTCCTTCTGGCTGTTGTAGTCTGAAAGAGTGTAGCCATCCTCC 285556
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
|||||||| || ||||| || || ||| ||| ||| | || | |||||||||||
Sbjct 285555 AGCTGTTTGCCCGCAAACATCAGACGTGGCTAGTCAGGTGGAATGCCCTCCTTGTCTTGG 285496
Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGT 34948
|| |||||| || | ||||| |||| || || || |||| || |||||
Sbjct 285495 AT------TTTGACTGACATTCTCGATGCTGTCACTGGGCTTGACCTCGAGGGAAATGGT 285442
Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
|| ||| | || ||||| |||||||| |||||
Sbjct 285441 CTTGCCCATCAGGGTCTTTACAAAGAT-TGCAT 285410
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 323923357885392
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