Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Galeopterus_20variegatus_20[refseq_20GCF_5F000696425.1_202014-06-05]
179,514 sequences; 3,187,660,572 total letters
Query= NC_017979.1
Length=43376
Score E
Sequences producing significant alignments: (Bits) Value
seq671 98.7 3e-16
>seq671
Length=569411
Score = 98.7 bits (108), Expect = 3e-16
Identities = 188/272 (69%), Gaps = 10/272 (4%)
Strand=Plus/Plus
Query 958 TTCCATATGGATGTTATGGTAGAATAGCTCCTAGGTCCGGATTAGCGGCTAAGTTTATGA 1017
|||| | ||| ||||| || ||| ||||||| | || || || || || || | |
Sbjct 254285 TTCCTTCTGGGTGTTACGGAAGAGTAGCTCCATGTTCTGGCTTGGCTGCCAAACACTTCA 254344
Query 1018 TTGATGTGGGTGCTGGTGTTATTGATCCAGACTTTAGGGGGAACGTTGGTGTTGTTTTAT 1077
| ||||| || |||||||| || ||| ||| | || || || ||||||||||| | |
Sbjct 254345 TAGATGTAGGAGCTGGTGTCATAGATGAAGATTACAGAGGAAATGTTGGTGTTGTACTGT 254404
Query 1078 TTAATTTTAGC-GATAAGCGTTTTCATATTTCAAGA--GGTGATAGGATTGCTCAGTTAA 1134
|||||||| || | || |||| | |||| | |||||| | ||||| ||| | |
Sbjct 254405 TTAATTTTGGCAAAGAAATGTTT---GAAGTCAAAAAGGGTGATCGAATTGCACAGCTTA 254461
Query 1135 TTTGTGAAAAGGCTGTTTTTCCATCCATTCAAATAGT--GGATTCCTTAGAGGATTCGGA 1192
|||||||| | | ||| |||| || || ||| | ||| ||||| || | ||
Sbjct 254462 TTTGTGAATGGATTTTTTATCCAGAAATAGAAGAAGTTCGAATT--TTAGATGACACTGA 254519
Query 1193 AAGGGGTTCTGCAGGATTTGGGTCTACCGGAA 1224
||||||||| | ||| ||||| || || ||||
Sbjct 254520 AAGGGGTTCAGGAGGTTTTGGTTCCACTGGAA 254551
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 138385968446184
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |