Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galeopterus_20variegatus_20[refseq_20GCF_5F000696425.1_202014-06-05] 179,514 sequences; 3,187,660,572 total letters Query= NC_017979.1 Length=43376 Score E Sequences producing significant alignments: (Bits) Value seq671 98.7 3e-16 >seq671 Length=569411 Score = 98.7 bits (108), Expect = 3e-16 Identities = 188/272 (69%), Gaps = 10/272 (4%) Strand=Plus/Plus Query 958 TTCCATATGGATGTTATGGTAGAATAGCTCCTAGGTCCGGATTAGCGGCTAAGTTTATGA 1017 |||| | ||| ||||| || ||| ||||||| | || || || || || || | | Sbjct 254285 TTCCTTCTGGGTGTTACGGAAGAGTAGCTCCATGTTCTGGCTTGGCTGCCAAACACTTCA 254344 Query 1018 TTGATGTGGGTGCTGGTGTTATTGATCCAGACTTTAGGGGGAACGTTGGTGTTGTTTTAT 1077 | ||||| || |||||||| || ||| ||| | || || || ||||||||||| | | Sbjct 254345 TAGATGTAGGAGCTGGTGTCATAGATGAAGATTACAGAGGAAATGTTGGTGTTGTACTGT 254404 Query 1078 TTAATTTTAGC-GATAAGCGTTTTCATATTTCAAGA--GGTGATAGGATTGCTCAGTTAA 1134 |||||||| || | || |||| | |||| | |||||| | ||||| ||| | | Sbjct 254405 TTAATTTTGGCAAAGAAATGTTT---GAAGTCAAAAAGGGTGATCGAATTGCACAGCTTA 254461 Query 1135 TTTGTGAAAAGGCTGTTTTTCCATCCATTCAAATAGT--GGATTCCTTAGAGGATTCGGA 1192 |||||||| | | ||| |||| || || ||| | ||| ||||| || | || Sbjct 254462 TTTGTGAATGGATTTTTTATCCAGAAATAGAAGAAGTTCGAATT--TTAGATGACACTGA 254519 Query 1193 AAGGGGTTCTGCAGGATTTGGGTCTACCGGAA 1224 ||||||||| | ||| ||||| || || |||| Sbjct 254520 AAGGGGTTCAGGAGGTTTTGGTTCCACTGGAA 254551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138385968446184