Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Galeopterus_20variegatus_20[refseq_20GCF_5F000696425.1_202014-06-05]
179,514 sequences; 3,187,660,572 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq50868 98.7 2e-15
seq19457 98.7 2e-15
seq1192 93.3 8e-14
>seq50868
Length=3469
Score = 98.7 bits (108), Expect = 2e-15
Identities = 146/207 (71%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 171866 ATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTCGTCATCCAATTG 171925
||| | ||| | ||| || ||| ||||| || || |||| | | | || || | ||
Sbjct 2099 ATGAAGAGTTGACTCCTTCTGAATGTTATAGTCAGACAAAGTACATCCATCTTCGAGGTG 2040
Query 171926 TTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTT 171985
||||||||||| || | ||| || || ||||| || |||||||| ||||| || || ||
Sbjct 2039 CTTACCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTT 1980
Query 171986 ATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGT 172045
| |||||||| ||| |||||||| | ||| || ||||| || || | || |
Sbjct 1979 AGCCTTTACATTTTCTATTGTATCTGAGGGTTCAGACTCAAGAGTGATAGTCCTCCCCAT 1920
Query 172046 TAATGTTTTAATGAATATCTGCATTTT 172072
| ||||| ||||| |||||||| ||
Sbjct 1919 AAGGGTTTTTATGAAAATCTGCATCTT 1893
>seq19457
Length=14611
Score = 98.7 bits (108), Expect = 2e-15
Identities = 146/207 (71%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 171866 ATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTCGTCATCCAATTG 171925
||| | ||| | ||| || ||| ||||| || || |||| | | | || || | ||
Sbjct 1948 ATGAAGAGTTGACTCCTTCTGAATGTTATAGTCAGACAAAGTACATCCATCTTCGAGGTG 2007
Query 171926 TTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTT 171985
||||||||||| || | ||| || || ||||| || |||||||| ||||| || || ||
Sbjct 2008 CTTACCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTT 2067
Query 171986 ATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGT 172045
| |||||||| ||| |||||||| | ||| || ||||| || || | || |
Sbjct 2068 AGCCTTTACATTTTCTATTGTATCTGAGGGTTCAGACTCAAGAGTGATAGTCCTCCCCAT 2127
Query 172046 TAATGTTTTAATGAATATCTGCATTTT 172072
| ||||| ||||| |||||||| ||
Sbjct 2128 AAGGGTTTTTATGAAAATCTGCATCTT 2154
>seq1192
Length=438698
Score = 93.3 bits (102), Expect = 8e-14
Identities = 167/241 (69%), Gaps = 5/241 (2%)
Strand=Plus/Plus
Query 171833 TTTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATT 171892
|||| || |||||| ||||| || || | | | ||| | ||| || ||| ||
Sbjct 85751 TTTCTTAGCACCACCATGAAGTCTCAACACAAGAAG---AGTTGACTCCTTCTGAATGTT 85807
Query 171893 ATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTG 171952
|| || | |||| ||| | || |||| ||| ||||||||||| || | ||| || ||
Sbjct 85808 ATGATGAAACAAAGTACGTCCATCTTCCAGTTGCTTACCAGCAAAGATCAGTCTTTGCTG 85867
Query 171953 GTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGA 172012
||||| || |||||||| ||||| || | || ||||| || | | ||||||||
Sbjct 85868 ATCAGGAGGAATTCCTTCCTTATCCTGGGTCTTGGCCTTTACGTTTTCTGTTGTATCTGA 85927
Query 172013 CGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTT-TAATGAATATCTGCATTT 172071
| ||| || || ||||| ||||| || || ||| |||| | | ||| |||||||| |
Sbjct 85928 GGGTTCAACCTCAAGAGTGATGGTCTT-CCCCATAAGGTTTCTTAGGAAAATCTGCATCT 85986
Query 172072 T 172072
|
Sbjct 85987 T 85987
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 903104942701200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |