Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Galeopterus_20variegatus_20[refseq_20GCF_5F000696425.1_202014-06-05]
179,514 sequences; 3,187,660,572 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq1029 127 2e-24
seq50868 107 2e-18
seq19457 107 2e-18
seq4376 102 7e-17
seq5167 100 3e-16
seq1701 86.0 6e-12
>seq1029
Length=469353
Score = 127 bits (140), Expect = 2e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||||||||| | || || || ||||| || || || || ||||| || || |||
Sbjct 371838 GATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTCGAGCCCAG 371779
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || || |||||||||||||| || || || || || || ||
Sbjct 371778 TGACACCATTGAGAACGTCAAGGCCAAGATCCAAGACAAGGAGGGGATCCCCCCTGACCA 371719
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| | ||||||||||| |||||||||||||| ||| | | | |||| || || ||
Sbjct 371718 GCAGAGGTTGATCTTTGCTGGGAAACAGCTGGAAGATGGACGCACCCTGTCTGACTACAA 371659
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|||||| || || || || || |||||||| |||| ||| | || ||
Sbjct 371658 CATTCAGAAAGAGTCCACTCTGCACTTGGTCCTGCGCTTGAGGGGTGG 371611
Score = 109 bits (120), Expect = 5e-19
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760
|| |||||||||||| | || || || ||||| || || || || ||||| || || ||
Sbjct 372980 ACAATGCAGATCTTTGTGAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTCGAGCCC 372921
Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820
| ||||| | || | || || |||||||||||||| || || || || || ||
Sbjct 372920 AGTGACACCATCGAGAACGTCAAGGCCAAGATCCAAGACAAGGAGGGCATCCCCCCTGAC 372861
Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880
|| || | |||||||| || |||||||||||||| ||| | | | |||| || ||
Sbjct 372860 CAGCAGAGGTTGATCTTCGCTGGGAAACAGCTGGAAGATGGTCGCACCCTGTCTGACTAC 372801
Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTG 24913
||||| || || || || || | ||| |||||
Sbjct 372800 AACATCCAGAAAGAGTCCACCTTGCACCTGGTG 372768
Score = 105 bits (116), Expect = 6e-18
Identities = 150/211 (71%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||||||||| | || || || ||||| || || || || ||||| || || |||
Sbjct 372066 GATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTCGAGCCCAG 372007
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || || |||||||||||||| || || || || || || ||
Sbjct 372006 TGACACCATTGAGAACGTCAAGGCCAAGATCCAAGACAAGGAGGGGATCCCCCCTGACCA 371947
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| | |||||||| || |||||||||||||| ||| | | | |||| || || ||
Sbjct 371946 GCAGAGGTTGATCTTCGCTGGGAAACAGCTGGAAGATGGTCGCACCCTGTCTGACTACAA 371887
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTG 24913
||| || || || || || | ||| |||||
Sbjct 371886 CATCCAGAAAGAGTCCACCTTGCACCTGGTG 371856
Score = 105 bits (116), Expect = 6e-18
Identities = 150/211 (71%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||||||||| | || || || ||||| || || || || ||||| || || |||
Sbjct 372294 GATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTCGAGCCCAG 372235
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || || |||||||||||||| || || || || || || ||
Sbjct 372234 TGACACCATTGAGAACGTCAAGGCCAAGATCCAAGACAAGGAGGGCATCCCCCCTGACCA 372175
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| | |||||||| || |||||||||||||| ||| | | | |||| || || ||
Sbjct 372174 GCAGAGGTTGATCTTCGCTGGGAAACAGCTGGAAGATGGTCGCACCCTGTCTGACTACAA 372115
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTG 24913
||| || || || || || | ||| |||||
Sbjct 372114 CATCCAGAAAGAGTCCACCTTGCACCTGGTG 372084
Score = 105 bits (116), Expect = 6e-18
Identities = 150/211 (71%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||||||||| | || || || ||||| || || || || ||||| || || |||
Sbjct 372522 GATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTCGAGCCCAG 372463
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || || |||||||||||||| || || || || || || ||
Sbjct 372462 TGACACCATTGAGAACGTCAAGGCCAAGATCCAAGACAAGGAGGGCATCCCCCCTGACCA 372403
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| | |||||||| || |||||||||||||| ||| | | | |||| || || ||
Sbjct 372402 GCAGAGGTTGATCTTCGCTGGGAAACAGCTGGAAGATGGTCGCACCCTGTCTGACTACAA 372343
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTG 24913
||| || || || || || | ||| |||||
Sbjct 372342 CATCCAGAAAGAGTCCACCTTGCACCTGGTG 372312
Score = 105 bits (116), Expect = 6e-18
Identities = 150/211 (71%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||||||||| | || || || ||||| || || || || ||||| || || |||
Sbjct 372750 GATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTCGAGCCCAG 372691
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || || |||||||||||||| || || || || || || ||
Sbjct 372690 TGACACCATTGAGAACGTCAAGGCCAAGATCCAAGACAAGGAGGGCATCCCCCCTGACCA 372631
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| | |||||||| || |||||||||||||| ||| | | | |||| || || ||
Sbjct 372630 GCAGAGGTTGATCTTCGCTGGGAAACAGCTGGAAGATGGTCGCACCCTGTCTGACTACAA 372571
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTG 24913
||| || || || || || | ||| |||||
Sbjct 372570 CATCCAGAAAGAGTCCACCTTGCACCTGGTG 372540
>seq50868
Length=3469
Score = 107 bits (118), Expect = 2e-18
Identities = 146/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||| || || ||||| || | || | ||||| || || || ||| || |
Sbjct 1895 GATGCAGATTTTCATAAAAACCCTTATGGGGAGGACTATCACTCTTGAGTCTGAACCCTC 1954
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| ||| |||||| ||||| |||||||| || || |||||||| ||||| |||||
Sbjct 1955 AGATACAATAGAAAATGTAAAGGCTAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCA 2014
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
||| | |||||||||| || || || || || ||| | | |||| || |||||
Sbjct 2015 GCAAAGACTGATCTTTGCTGGTAAGCACCTCGAAGATGGATGTACTTTGTCTGACTATAA 2074
Query 24883 CATTCAAAAGGAATCGACACTACA 24906
|||||| ||||| || || || ||
Sbjct 2075 CATTCAGAAGGAGTCAACTCTTCA 2098
>seq19457
Length=14611
Score = 107 bits (118), Expect = 2e-18
Identities = 146/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||| || || ||||| || | || | ||||| || || || ||| || |
Sbjct 2152 GATGCAGATTTTCATAAAAACCCTTATGGGGAGGACTATCACTCTTGAGTCTGAACCCTC 2093
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| ||| |||||| ||||| |||||||| || || |||||||| ||||| |||||
Sbjct 2092 AGATACAATAGAAAATGTAAAGGCTAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCA 2033
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
||| | |||||||||| || || || || || ||| | | |||| || |||||
Sbjct 2032 GCAAAGACTGATCTTTGCTGGTAAGCACCTCGAAGATGGATGTACTTTGTCTGACTATAA 1973
Query 24883 CATTCAAAAGGAATCGACACTACA 24906
|||||| ||||| || || || ||
Sbjct 1972 CATTCAGAAGGAGTCAACTCTTCA 1949
>seq4376
Length=192284
Score = 102 bits (112), Expect = 7e-17
Identities = 154/217 (71%), Gaps = 4/217 (2%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||| || || ||||| || || || || || || | || || | ||| || |
Sbjct 63662 GATGCAGATTTTCATAAAAACCCTTACGGGAAAGACCATCATTCTTGACATTGAACCCTC 63603
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| ||| ||| || ||||| |||||||| || || |||||||| ||||| |||||
Sbjct 63602 GGATACAATAGGAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCA 63543
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
||| | ||| |||||| || || || ||||| ||| || || | ||||||||
Sbjct 63542 GCAAAGACTGACCTTTGCTGGCAAGCAACTGGAAGATG-GATGTACTTT---GATTATAA 63487
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGA 24919
|||||| ||| | ||||| || | | |||||| ||
Sbjct 63486 CATTCAGAAGAAGTCGACTCTTCCTCTTGTGTTGAGA 63450
>seq5167
Length=254018
Score = 100 bits (110), Expect = 3e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||| || | ||||| | | || || || || || || || || ||| ||
Sbjct 220715 GATGCAGATTTTCGTAAAAACCTTTATGGGGAAGACCATCACTCTTGAGGTTGAACCCTT 220656
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| ||| |||||| ||||| |||||||| || || |||||||| ||||| |||||
Sbjct 220655 GGATACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCA 220596
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
||| | |||||| ||| || || || ||||| ||| | | |||| || |||||
Sbjct 220595 GCAAAGACTGATCTCTGCTGGTAAGCAACTGGAAGATGGACGTACTTTGTCTGACTATAA 220536
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTT 24915
|||||| ||||| || | || || | |||||
Sbjct 220535 CATTCAGAAGGAGTCAAATCTTCATCTTGTGTT 220503
>seq1701
Length=366390
Score = 86.0 bits (94), Expect = 6e-12
Identities = 151/215 (70%), Gaps = 5/215 (2%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||| |||||| | || || || | || || || ||| | ||||| || | |||
Sbjct 285409 GATGCA-ATCTTTGTAAAGACCCTGATGGGCAAGACCATTTCCCTCGAGGTCAAGCCCAG 285467
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|||| | || | || | ||||| |||||||||| || || || || || || |
Sbjct 285468 TGACAGCATCGAGAATGTCAGTCAAAA--TCCAAGACAAGGAGGGCATTCCACCTGACTA 285525
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAAC-ATGTCAGATTATA 24881
| |||| |||| ||||| || |||||||||||||| | | | || | ||||| || |
Sbjct 285526 GCCACGTCTGATGTTTGCGGGCAAACAGCTGGAGGA-TGGCTACACTCTTTCAGACTACA 285584
Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTG 24916
||| || ||||| || || || ||||||||| ||
Sbjct 285585 ACAGCCAGAAGGAGTCCACCCTGCACTTGGTGCTG 285619
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448888063527920
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