Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Galeopterus_20variegatus_20[refseq_20GCF_5F000696425.1_202014-06-05]
179,514 sequences; 3,187,660,572 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq1029 149 4e-31
seq1701 104 2e-17
seq9005 95.1 8e-15
seq5167 95.1 8e-15
seq633 95.1 8e-15
>seq1029
Length=469353
Score = 149 bits (164), Expect = 4e-31
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|| |||||||| | |||||||| ||| | ||| ||| ||||||||||| ||||| ||
Sbjct 371611 CCACCCCTCAAGCGCAGGACCAAGTGCAGAGTGGACTCTTTCTGAATGTTGTAGTCAGAC 371670
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
||| |||| |||| ||||| || || || || ||||||| | |||||||| | ||
Sbjct 371671 AGGGTGCGTCCATCTTCCAGCTGTTTCCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGG 371730
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930
| |||||||||||| | || || |||||| | || | ||| ||| ||||||
Sbjct 371731 ATCCCCTCCTTGTCTTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCGACC 371790
Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| | ||| |||||||| || || |||||||| || |||||||||||
Sbjct 371791 TCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 371837
Score = 140 bits (154), Expect = 2e-28
Identities = 158/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||||||| | |||| ||| ||||| ||||| ||||| || ||| |||| ||||
Sbjct 371854 AGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGACCATCT 371913
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| || || || |||||||||| | |||||||| | || | ||||||||||||
Sbjct 371914 TCCAGCTGTTTCCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGGATCCCCTCCTTGTCT 371973
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | || | ||| ||| |||||| || | ||| ||||||
Sbjct 371974 TGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTC 372033
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || || |||||||| || |||||||||||
Sbjct 372034 TTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 372065
Score = 140 bits (154), Expect = 2e-28
Identities = 158/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||||||| | |||| ||| ||||| ||||| ||||| || ||| |||| ||||
Sbjct 372766 AGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGACCATCT 372825
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| || || || |||||||||| | |||||||| | || | |||||||||||
Sbjct 372826 TCCAGCTGTTTCCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCT 372885
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | || | ||| ||| |||||| || | ||| ||||||
Sbjct 372886 TGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTC 372945
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || || |||||||| ||||||||||||||
Sbjct 372946 TTGCCGGTCAGGGTCTTCACAAAGATCTGCAT 372977
Score = 134 bits (148), Expect = 9e-27
Identities = 157/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||||||| | |||| ||| ||||| ||||| ||||| || ||| |||| ||||
Sbjct 372082 AGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGACCATCT 372141
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| || || || |||||||||| | |||||||| | || | |||||||||||
Sbjct 372142 TCCAGCTGTTTCCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCT 372201
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | || | ||| ||| |||||| || | ||| ||||||
Sbjct 372202 TGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTC 372261
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || || |||||||| || |||||||||||
Sbjct 372262 TTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 372293
Score = 134 bits (148), Expect = 9e-27
Identities = 157/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||||||| | |||| ||| ||||| ||||| ||||| || ||| |||| ||||
Sbjct 372310 AGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGACCATCT 372369
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| || || || |||||||||| | |||||||| | || | |||||||||||
Sbjct 372370 TCCAGCTGTTTCCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCT 372429
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | || | ||| ||| |||||| || | ||| ||||||
Sbjct 372430 TGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTC 372489
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || || |||||||| || |||||||||||
Sbjct 372490 TTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 372521
Score = 134 bits (148), Expect = 9e-27
Identities = 157/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||||||| | |||| ||| ||||| ||||| ||||| || ||| |||| ||||
Sbjct 372538 AGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGACCATCT 372597
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| || || || |||||||||| | |||||||| | || | |||||||||||
Sbjct 372598 TCCAGCTGTTTCCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCT 372657
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | || | ||| ||| |||||| || | ||| ||||||
Sbjct 372658 TGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTC 372717
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || || |||||||| || |||||||||||
Sbjct 372718 TTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 372749
>seq1701
Length=366390
Score = 104 bits (114), Expect = 2e-17
Identities = 154/217 (71%), Gaps = 11/217 (5%)
Strand=Plus/Minus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
||| |||| ||| | |||| ||||||||| |||| ||||| || || || ||||
Sbjct 285619 CAGCACCAAGTGCAGGGTGGACTCCTTCTGGCTGTTGTAGTCTGAAAGAGTGTAGCCATC 285560
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
||||| || || || || || ||||| ||| ||| ||| | || | |||||||||||
Sbjct 285559 CTCCAGCTGTTTGCCCGCAAACATCAGACGTGGCTAGTCAGGTGGAATGCCCTCCTTGTC 285500
Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTA 34940
| || |||||| || | ||||| ||| ||| || ||| || | || |
Sbjct 285499 TTGGAT------TTTGACTGACATTCTCGATGCTGTCACTGGGCTTGACCTCGAGGGAAA 285446
Query 34941 TGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||||||| ||| | ||||||||||||||||| |||||
Sbjct 285445 TGGTCTTGCCCATCAGGGTCTTTACAAAGAT-TGCAT 285410
>seq9005
Length=82358
Score = 95.1 bits (104), Expect = 8e-15
Identities = 143/200 (72%), Gaps = 5/200 (3%)
Strand=Plus/Plus
Query 34780 GGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCC 34839
|||| ||| | ||| | ||| ||||| || || || | |||| ||||| || || ||
Sbjct 12352 GGTGGACTCTTCCTGGACGTTGTAGTCTGAAAGAGTGTGGCCATCCTCCAGCTGTTTGCC 12411
Query 34840 GGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTT 34899
|| || ||||| | |||||||| || | ||||||||||| | | ||| ||
Sbjct 12412 CGCAAATATCAGATGCTGCTGGTCAGCTGGGATGCCCTCCTTGTCTTGGACTTTGGCGTT 12471
Query 34900 GACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGG 34957
||| || || || | ||| ||| |||||| |||| ||| |||||||| ||||| | |
Sbjct 12472 GAC--ATTCTTGATGGTGTCACTGGGCTCGACCTCAA-GGTGATGGTCTTGCCCGTCAAG 12528
Query 34958 GTCTTTACAAAGATCTGCAT 34977
|||| ||||||||||||||
Sbjct 12529 GTCTCCACAAAGATCTGCAT 12548
>seq5167
Length=254018
Score = 95.1 bits (104), Expect = 8e-15
Identities = 136/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
||||||||||||||||||||| || | | || |||| ||||||||||| || || |
Sbjct 220523 CTCCTTCTGAATGTTATAGTCAGACAAAGTACGTCCATCTTCCAGTTGCTTACCAGCAGA 220582
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905
|||||||| |||||| || | || | || ||||| || | || || || ||
Sbjct 220583 GATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATT 220642
Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965
| |||| | || || || || |||| || |||||||| ||| | | ||| |||||
Sbjct 220643 TTCTATTGTATCCAAGGGTTCAACCTCAAGAGTGATGGTCTTCCCCATAAAGGTTTTTAC 220702
Query 34966 AAAGATCTGCAT 34977
|| ||||||||
Sbjct 220703 GAAAATCTGCAT 220714
>seq633
Length=582679
Score = 95.1 bits (104), Expect = 8e-15
Identities = 142/200 (71%), Gaps = 4/200 (2%)
Strand=Plus/Plus
Query 34780 GGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCC 34839
|||| ||| ||||| ||||| ||||| || || |||| |||| ||||| ||||| ||
Sbjct 204121 GGTGGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCC 204180
Query 34840 GGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTT 34899
|| ||||| || | |||||||| | || | || || || || | || || ||
Sbjct 204181 TGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCTTTATCCTGGATCTTGGCCTT 204240
Query 34900 GACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGG 34957
|| || || || | ||| ||| ||| || || | ||| |||||||| || || |||
Sbjct 204241 CAC--ATTCTCGATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTCTTGCCGGTCAGG 204298
Query 34958 GTCTTTACAAAGATCTGCAT 34977
||||| || |||||||||||
Sbjct 204299 GTCTTCACGAAGATCTGCAT 204318
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324980240539166
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