Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galeopterus_20variegatus_20[refseq_20GCF_5F000696425.1_202014-06-05] 179,514 sequences; 3,187,660,572 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq633 104 2e-17 >seq633 Length=582679 Score = 104 bits (114), Expect = 2e-17 Identities = 160/227 (70%), Gaps = 1/227 (0%) Strand=Plus/Minus Query 107539 TTTATAAGAGGTTTAAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCG 107598 |||| || |||| |||||||||||||| || || ||| | || ||||| ||||| ||| Sbjct 204562 TTTAAAATAGGTC-AAAATGCAAATTTTCGTGAAGACTCTGACCGGCAAGACCATCACCC 204504 Query 107599 TCGAAACGGAGGCTGGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAG 107658 | ||| |||| | | || || ||| | || || ||||| |||||||||| Sbjct 204503 TGGAAGTGGAGCCCAGTGACACCATCGAGAATGTGAAGGCCAAGATCCAGGATAAAGAAG 204444 Query 107659 GCGTGCCCGTGGATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAA 107718 || | ||| || |||||||| || || | ||| || || |||||||| || | | | Sbjct 204443 GCATCCCCCCTGACCAGCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCA 204384 Query 107719 CAATGGCGGACTACAACATTCAAAAGGAGTCTACGTTGCACATGGTG 107765 | | | || |||||||| || || ||||| || |||||| ||||| Sbjct 204383 CTCTTTCTGATTACAACATCCAGAAAGAGTCCACCTTGCACCTGGTG 204337 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398004126617146