Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Galeopterus_20variegatus_20[refseq_20GCF_5F000696425.1_202014-06-05]
179,514 sequences; 3,187,660,572 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq1029 145 7e-30
seq633 145 7e-30
seq9005 91.5 1e-13
seq7635 82.4 7e-11
>seq1029
Length=469353
Score = 145 bits (160), Expect = 7e-30
Identities = 153/199 (77%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
||||||||||||||| || ||||| || || ||| ||| | || || ||||| || |
Sbjct 372096 GGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGACCA-TCTTCCAGCTGTTTCC 372154
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| ||| | || | || ||||||||| || |||||||| |||||||| |||||| ||
Sbjct 372155 CAGCGAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCTTGGATCTTGGCCT 372214
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
||| | ||||| ||||| ||||||| || |||| ||||| ||| ||||||||||| |
Sbjct 372215 TGACGTTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGG 372274
Query 133642 TTTTTACGAAAATCTGCAT 133660
| || ||||| ||||||||
Sbjct 372275 TCTTCACGAAGATCTGCAT 372293
Score = 145 bits (160), Expect = 7e-30
Identities = 153/199 (77%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
||||||||||||||| || ||||| || || ||| ||| | || || ||||| || |
Sbjct 372324 GGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGACCA-TCTTCCAGCTGTTTCC 372382
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| ||| | || | || ||||||||| || |||||||| |||||||| |||||| ||
Sbjct 372383 CAGCGAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCTTGGATCTTGGCCT 372442
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
||| | ||||| ||||| ||||||| || |||| ||||| ||| ||||||||||| |
Sbjct 372443 TGACGTTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGG 372502
Query 133642 TTTTTACGAAAATCTGCAT 133660
| || ||||| ||||||||
Sbjct 372503 TCTTCACGAAGATCTGCAT 372521
Score = 145 bits (160), Expect = 7e-30
Identities = 153/199 (77%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
||||||||||||||| || ||||| || || ||| ||| | || || ||||| || |
Sbjct 372552 GGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGACCA-TCTTCCAGCTGTTTCC 372610
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| ||| | || | || ||||||||| || |||||||| |||||||| |||||| ||
Sbjct 372611 CAGCGAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCTTGGATCTTGGCCT 372670
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
||| | ||||| ||||| ||||||| || |||| ||||| ||| ||||||||||| |
Sbjct 372671 TGACGTTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGG 372730
Query 133642 TTTTTACGAAAATCTGCAT 133660
| || ||||| ||||||||
Sbjct 372731 TCTTCACGAAGATCTGCAT 372749
Score = 140 bits (154), Expect = 3e-28
Identities = 152/199 (76%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
||||||||||||||| || ||||| || || ||| ||| | || || ||||| || |
Sbjct 371868 GGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGACCA-TCTTCCAGCTGTTTCC 371926
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| ||| | || | || ||||||||| || ||||| || |||||||| |||||| ||
Sbjct 371927 CAGCGAAGATCAACCTCTGCTGGTCAGGGGGGATCCCCTCCTTGTCTTGGATCTTGGCCT 371986
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
||| | ||||| ||||| ||||||| || |||| ||||| ||| ||||||||||| |
Sbjct 371987 TGACGTTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGG 372046
Query 133642 TTTTTACGAAAATCTGCAT 133660
| || ||||| ||||||||
Sbjct 372047 TCTTCACGAAGATCTGCAT 372065
Score = 136 bits (150), Expect = 4e-27
Identities = 151/199 (76%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
||||||||||||||| || ||||| || || ||| ||| | || || ||||| || |
Sbjct 372780 GGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGACCA-TCTTCCAGCTGTTTCC 372838
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| ||| | || | || ||||||||| || |||||||| |||||||| |||||| ||
Sbjct 372839 CAGCGAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCTTGGATCTTGGCCT 372898
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
||| | ||| | ||||| ||||||| || |||| ||||| ||| ||||||||||| |
Sbjct 372899 TGACGTTCTCGATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGG 372958
Query 133642 TTTTTACGAAAATCTGCAT 133660
| || || || ||||||||
Sbjct 372959 TCTTCACAAAGATCTGCAT 372977
Score = 129 bits (142), Expect = 6e-25
Identities = 149/198 (75%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|||||||||||||| || ||||| || || ||| | | | || || ||||| || ||
Sbjct 371641 GTGGACTCTTTCTGAATGTTGTAGTCAGACAGGGTGCGTCCA-TCTTCCAGCTGTTTCCC 371699
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| | || | || ||||||||| || ||||| || |||||||| |||||| |||
Sbjct 371700 AGCAAAGATCAACCTCTGCTGGTCAGGGGGGATCCCCTCCTTGTCTTGGATCTTGGCCTT 371759
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | ||||| ||||| ||||||| || |||| ||||| ||| ||||||||||| ||
Sbjct 371760 GACGTTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGT 371819
Query 133643 TTTTACGAAAATCTGCAT 133660
|| ||||| ||||||||
Sbjct 371820 CTTCACGAAGATCTGCAT 371837
>seq633
Length=582679
Score = 145 bits (160), Expect = 7e-30
Identities = 153/199 (77%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
||||||||||||||| || |||||||| | ||| | | | || || ||||||||||
Sbjct 204349 GGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCA-TCTTCCAGCTGCTTGC 204407
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| || | ||||||| ||||||||| || ||||||||||| || || |||||| ||
Sbjct 204408 CTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCTTTATCCTGGATCTTGGCCT 204467
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
| | | ||| | ||||| |||||||||| || | ||||| ||| |||||||||||||
Sbjct 204468 TCACATTCTCGATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTCTTGCCGGTCAGAG 204527
Query 133642 TTTTTACGAAAATCTGCAT 133660
| || |||||||| |||||
Sbjct 204528 TCTTCACGAAAATTTGCAT 204546
Score = 136 bits (150), Expect = 4e-27
Identities = 151/199 (76%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
||||||||||||||| || ||||| || | ||| | | | || || ||||||||||
Sbjct 204121 GGTGGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCA-TCTTCCAGCTGCTTGC 204179
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| || | ||||||| ||||||||| || ||||||||||| || || |||||| ||
Sbjct 204180 CTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCTTTATCCTGGATCTTGGCCT 204239
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
| | | ||| | ||||| |||||||||| || | ||||| ||| ||||||||||| |
Sbjct 204240 TCACATTCTCGATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTCTTGCCGGTCAGGG 204299
Query 133642 TTTTTACGAAAATCTGCAT 133660
| || ||||| ||||||||
Sbjct 204300 TCTTCACGAAGATCTGCAT 204318
>seq9005
Length=82358
Score = 91.5 bits (100), Expect = 1e-13
Identities = 144/200 (72%), Gaps = 5/200 (3%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
||||||||||| ||| | ||||| || | ||| | | | ||||| ||||| ||||
Sbjct 12352 GGTGGACTCTTCCTGGACGTTGTAGTCTGAAAGAGTGTGGCCA-TCCTCCAGCTGTTTGC 12410
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC- 133580
|||| | || || |||||||||| | |||||||| |||||||| || |||| ||
Sbjct 12411 CCGCAAATATCAGATGCTGCTGGTCAGCTGGGATGCCCTCCTTGTC-TTGGACTTTGGCG 12469
Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640
|||| | || | ||||| ||||||| || || | ||||| ||| ||||| ||||
Sbjct 12470 TTGACATTCTTGATGGTGTCACTGGGCTCGACCTC-AAGGTGATGGTCTTGCCCGTCAAG 12528
Query 133641 GTTTTTACGAAAATCTGCAT 133660
|| | || || ||||||||
Sbjct 12529 GTCTCCACAAAGATCTGCAT 12548
>seq7635
Length=151111
Score = 82.4 bits (90), Expect = 7e-11
Identities = 77/98 (79%), Gaps = 0/98 (0%)
Strand=Plus/Plus
Query 148866 TACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTG 148925
|||||||| || || | |||||| |||||||| |||||| |||| |||||| || |||
Sbjct 110284 TACTCTACTATTTCTGTGCACAGGTTGCTGCACTTGATCGTTCCCAGGTTCTTCTGGTTG 110343
Query 148926 CTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGG 148963
||||| | || || | || ||||| |||||||||||
Sbjct 110344 CTCTTCCGATTACAGGAATCTTTGTAGAGCATGTACGG 110381
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 482336039981360
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