Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Galeopterus_20variegatus_20[refseq_20GCF_5F000696425.1_202014-06-05]
179,514 sequences; 3,187,660,572 total letters
Query= NC_024696.1
Length=180800
Score E
Sequences producing significant alignments: (Bits) Value
seq964 221 1e-52
seq4934 217 2e-51
>seq964
Length=529263
Score = 221 bits (244), Expect = 1e-52
Identities = 242/322 (75%), Gaps = 0/322 (0%)
Strand=Plus/Minus
Query 171771 CATAGAGTGTCAGACAGGTCTTACCCGATATTTTTCCGGACCCAAAAGTATTAAACAAAC 171830
||||||| || || |||| | || || || || || || ||||| ||||| || ||
Sbjct 295630 CATAGAGAGTGAGGCAGGCTGTTCCTGAGATCTTCCCAGAACCAAAGGTATTGAAGTGAC 295571
Query 171831 ACATAAAACAGCCTTCGTCCTCCACGGTGGTGTTCCAAAAAGTCAATGTAGAATTTCTGA 171890
|||| |||| ||||| ||||||| ||||||||||||||| || | || || || ||
Sbjct 295570 ACATGTAACACCCTTCATCCTCCAAGGTGGTGTTCCAAAAGGTGATGGTTGAGTTCTGGA 295511
Query 171891 GTCCGAGTTGCGTAATGTTCACCCGGTCCTTGTACGGAGGCTGGACGACAACACCGTGAT 171950
|||| || || || ||||| | | |||||| || | ||||||||| ||||| || || |
Sbjct 295510 GTCCCAGCTGAGTGATGTTTATCTTGTCCTTATAGGCAGGCTGGACCACAACCCCATGGT 295451
Query 171951 TCTCGCTGAACGTGGCCATGTTTTCGGGGCTCGTAGCCTTTATCTTCTGCCACGTTACTA 172010
||| |||||| ||| |||||||||| ||||| | |||||| | |||||||| || || |
Sbjct 295450 TCTTGCTGAAGGTGACCATGTTTTCTGGGCTTGCAGCCTTCTTTTTCTGCCATGTCACAA 295391
Query 172011 TTAAAACTTCTTTGTCGGTTTGAAGAGAGCATCTTAAAGAAGCAGGTGTGTTCAATAATT 172070
| || ||||| | ||||| ||||| |||||||| |||||||||||||||| |
Sbjct 295390 TCAAGACTTCCTGAGAAGTTTGCAGAGAACATCTTAAGGAAGCAGGTGTGTTCAGCTGCT 295331
Query 172071 CCCTTTCGTCTTGCGTTACCAC 172092
| ||||| || || || |||||
Sbjct 295330 CTCTTTCATCCTGGGTCACCAC 295309
>seq4934
Length=300703
Score = 217 bits (240), Expect = 2e-51
Identities = 611/932 (66%), Gaps = 17/932 (2%)
Strand=Plus/Minus
Query 162059 CCAGGGACTTATGTCGGAGATACTCGTCTAGACACTGGACCGCGAACACGTCTCGTTCCT 162118
|||||| ||||| | |||| ||| || | |||||||| ||||| | ||| |||
Sbjct 80227 CCAGGGCTTTATGCCTCAGATGCTCATCCAAACACTGGATGGCGAAGAGGTCGACGTCCA 80168
Query 162119 CATCGAACTTGTTCGCGAACA---GGTGATGCGAGTTCTTCAATATCCAATTAAGATCCC 162175
| || ||||| || || |||| ||||||| | | || ||||| || | || |
Sbjct 80167 CGTCAAACTTATTGGCAAACAAGTGGTGATG-GCG-----CAGCATCCAGTTTAAGTCGC 80114
Query 162176 CCGATCCGAACACGCACACGGACCGCACGTGCACGCCGCTGCACGGCGGATACAGGGCCC 162235
| | ||| || || ||||| || |||||||| || || |||| || || || | || |
Sbjct 80113 CAGCTCCAAAGACACACACTGAGCGCACGTGGACCCCATTGCAGGGTGGGTAGGGAGCAC 80054
Query 162236 CATCGTCCACATCCCCCTCGTAGTATTGCCACTTAACGAACCTAGTGATAGCCTGCATGT 162295
| | | ||||||||||| |||| |||||||| || ||||||| | ||||||||||
Sbjct 80053 CCTTGGAAACATCCCCCTCAAAGTACTGCCACTTGACAAACCTAGCAACCGCCTGCATGT 79994
Query 162296 CGGAGGTGTCGTACTTGTACACTGACGGCACGGCTCCAGGAACACCCGGCAGTCTCTGTA 162355
| || |||||| || | | | | | | || || || | || | || || |
Sbjct 79993 CAGACAAGTCGTATTTATGGCTTAAGGAGAGTGAGCCCGGGACTTCGGGGATCCTTTGGA 79934
Query 162356 GAGTAGCCCACAGGTGTTCGTCTGGACTATACGTCTCCTTCGACCACTCCATGAACTCCC 162415
|||||||| || | ||| ||||| || || || || | | ||||||||| ||||
Sbjct 79933 TGGTAGCCCAGAGATATTCATCTGGGCTGTAAGTATCTTGTGCCCACTCCATAAACTTTT 79874
Query 162416 TGACCGTTTTATCGTATAGAATGTAAGAGACGTAGGACCTGGTCACAATAAAGTACGCGC 162475
|| ||| || | ||| | || || || ||| | || | ||| || || |
Sbjct 79873 GGATTTTTTCATTCTCTAGCACATACCCCACATATTCCCTACTGACCACAAAATAGGCAC 79814
Query 162476 TACCAGAAAACACGGGTATGCGTATAGGAGGGGGCTCTTTGTCTTGACCCGTGTTGACTA 162535
| || ||||| | ||| | | || || ||| |||| |||||||||| |
Sbjct 79813 TGCCTGAAAAAAGAGGTGTTTCAAGTGGGGGATGCTTTTTGATAGTCCCCGTGTTGATCA 79754
Query 162536 CCATTCCCTCTACGACCACGTGTCTCTTCCTCCACCTGGCCATCTTACTGGTAGACGGGT 162595
| |||| | |||| || | || ||||||| | ||| ||| | | |
Sbjct 79753 GCTTTCCATTAACGATTACAAAACGTTTTTTCCACCTTTCTTCTTTATTGGATGGCATCT 79694
Query 162596 GTTCGGTCTCTAGACTGTTACGACCCCCCAAGGCCTTCAGCTGACGCACCATCTCTAGAT 162655
||||| || || |||| |||| || | ||| |||| | || || |||| |
Sbjct 79693 TCTCGGTTTCGAGGTTGTTTTCACCCATGAATGACTTGAGCTTTCTGACAATTTCTAAGT 79634
Query 162656 TGGTCTTAAGGGGAAAGTCGGTGCCGCAGAGATTAATAACATATTTCCA--CTTAACGCT 162713
|||| |||| ||||| || | || || ||||| || | |||||||| || || |
Sbjct 79633 TGGTTTTAATAGGAAAATCCATACCACAAAGATTTATCAAGTATTTCCAGGCTGTACTC- 79575
Query 162714 GAGTCCGTACAGATCCTGTAGACAGTTCAGATCGGCCTGGACGCGACTCCACGACGCGTA 162773
| |||||| || |||| | ||||| || || |||||||| | || ||| || || ||
Sbjct 79574 -ATTCCGTAGAGGTCCTTCATGCAGTTGAGGTCCGCCTGGACCCTACCCCAGGATGCATA 79516
Query 162774 CACGACGCTCTCCAACCTAGTGGCGACAAAGACATTGTCGAAACACGAAACTATCCCCAT 162833
| || ||||||||| | |||| |||||||| || |||||| || | || |||||
Sbjct 79515 AATCACACTCTCCAACTGACTGGCCACAAAGACGTTACTGAAACAGGACGCAATGCCCAT 79456
Query 162834 CACGGCCAGTGAGAAC--ATCGGGTCCGCTTTCCTATCTACGTGTACGCAGTATAGATTC 162891
||| || | | || ||| || | ||| | || ||||| | ||| || | ||||
Sbjct 79455 CACCGCAGCTAAAAAGGAATCC--TCTGATTTTTTGTCCACGTGAATGCAATAGAAATTC 79398
Query 162892 TGAGGGGCGTAGATGGCCCTCAGTAATCTCTCGAACATCTCTATCTTATGGTGTACCACG 162951
||||| || ||||||||||| | || || | ||| || || || || || |||||
Sbjct 79397 TGAGGCATATAAATGGCCCTCAGGAGCCTGTCAAGCATTTCAATTTTGTGATGAACCACT 79338
Query 162952 ATAGAATACGCTATGGGGAACTCAGCCTCCTC 162983
|| ||||| || || || ||||| ||||| ||
Sbjct 79337 ATGGAATATGCAATTGGAAACTCCGCCTCTTC 79306
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 577134041974400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |