Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Galeopterus_20variegatus_20[refseq_20GCF_5F000696425.1_202014-06-05]
179,514 sequences; 3,187,660,572 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq3745 111 4e-19
seq5167 105 2e-17
seq4376 104 6e-17
seq1192 95.1 3e-14
seq633 93.3 1e-13
>seq3745
Length=218430
Score = 111 bits (122), Expect = 4e-19
Identities = 155/213 (73%), Gaps = 6/213 (3%)
Strand=Plus/Plus
Query 206179 TTTTGCAAAACGCTCACAGGAAAA-ACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237
||||| ||||| || ||| || || |||||||| || || || ||| | ||| |
Sbjct 138326 TTTTGTAAAACTCTTTAAGGGGAAGACCATCACTTTTGAGGTTAAACCCTCTAATACAAT 138385
Query 206238 CGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA-AGAC 206296
||| |||||| ||||| || || || ||||||||| | || || ||| |||
Sbjct 138386 AGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCTTCCTGA---TCAGCAGA- 138441
Query 206297 TTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGA 206356
|| |||| || || ||||| ||||||||||| | |||| | || |||||| | ||||
Sbjct 138442 TTGTCTTTGCTGGCAAGCAACTGGAAGATGGATATAATTTGTCTGAATACAACATTCAGA 138501
Query 206357 AAGAGTCTACTCTTCACCTTGTTTTGAGACTTC 206389
| ||||| |||||||| ||||| ||||||||||
Sbjct 138502 AGGAGTCCACTCTTCATCTTGTGTTGAGACTTC 138534
>seq5167
Length=254018
Score = 105 bits (116), Expect = 2e-17
Identities = 139/193 (72%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 206197 GGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAAAAG 206256
|| || || |||||| | || || ||| | || ||| | ||| |||||| |||
Sbjct 220687 GGGAAGACCATCACTCTTGAGGTTGAACCCTTGGATACAATAGAAAATGTAAAGGCCAAG 220628
Query 206257 ATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAGCAG 206316
|| || || || ||||||||| || || |||||||| |||| || || |||||
Sbjct 220627 ATCCAGGATAAGGAAGGAATTCCTCCTGATCAGCAAAGACTGATCTCTGCTGGTAAGCAA 220568
Query 206317 TTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCACCTT 206376
||||||||||| | |||||| | || || ||| | ||||| ||||| | |||||| |||
Sbjct 220567 CTGGAAGATGGACGTACTTTGTCTGACTATAACATTCAGAAGGAGTCAAATCTTCATCTT 220508
Query 206377 GTTTTGAGACTTC 206389
|| || |||||||
Sbjct 220507 GTGTTTAGACTTC 220495
Score = 93.3 bits (102), Expect = 1e-13
Identities = 83/104 (80%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 204753 GAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCC 204812
||||||| || ||||| |||||| | ||||| ||||| | |||||||||| |||||| |
Sbjct 220495 GAAGTCTAAACACAAGATGAAGATTTGACTCCTTCTGAATGTTATAGTCAGACAAAGTAC 220554
Query 204813 TTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856
|||||||||||| ||||| || || |||| || | ||| |||
Sbjct 220555 GTCCATCTTCCAGTTGCTTACCAGCAGAGATCAGTCTTTGCTGA 220598
>seq4376
Length=192284
Score = 104 bits (114), Expect = 6e-17
Identities = 146/205 (71%), Gaps = 4/205 (2%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| || || ||||| || |||| | | || | ||| || || ||| | | |
Sbjct 63646 AAAACCCTTACGGGAAAGACCATCATTCTTGACATTGAACCCTCGGATACAATAGGAAAT 63587
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|||||| ||||| || || || ||||||||| || || |||||||| | |||
Sbjct 63586 GTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAGCAAAGACTGACCTTT 63527
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || ||||| ||||||||||| | ||||| ||||| ||| | ||||| ||||
Sbjct 63526 GCTGGCAAGCAACTGGAAGATGGATGTACTTT----GATTATAACATTCAGAAGAAGTCG 63471
Query 206365 ACTCTTCACCTTGTTTTGAGACTTC 206389
||||||| ||||| ||||||||||
Sbjct 63470 ACTCTTCCTCTTGTGTTGAGACTTC 63446
>seq1192
Length=438698
Score = 95.1 bits (104), Expect = 3e-14
Identities = 137/193 (71%), Gaps = 3/193 (2%)
Strand=Plus/Minus
Query 206197 GGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAAAAG 206256
|| || || |||||| | || || ||| || || ||| ||| |||||| |||
Sbjct 85957 GGGAAGACCATCACTCTTGAGGTTGAACCCTCAGATACAACAGAAAACGTAAAGGCCAAG 85898
Query 206257 ATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAGCAG 206316
| || || || ||||||||| || || |||||||| ||||| || || |||||
Sbjct 85897 ACCCAGGATAAGGAAGGAATTCCTCCTGATCAGCAAAGACTGATCTTTGCTGGTAAGCAA 85838
Query 206317 TTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCACCTT 206376
||||||||||| | |||||| || | ||| | ||||| ||||| |||||| |||
Sbjct 85837 CTGGAAGATGGACGTACTTTGTTTCATCATAACATTCAGAAGGAGTCAACTCTT---CTT 85781
Query 206377 GTTTTGAGACTTC 206389
|| ||||||||||
Sbjct 85780 GTGTTGAGACTTC 85768
>seq633
Length=582679
Score = 93.3 bits (102), Expect = 1e-13
Identities = 137/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || || || || || || ||||| |||||||||| |||||| ||||
Sbjct 204531 AAGACTCTGACCGGCAAGACCATCACCCTGGAAGTGGAGCCCAGTGACACCATCGAGAAT 204472
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| || || |||||||| || || ||| || || || |||||
Sbjct 204471 GTGAAGGCCAAGATCCAGGATAAAGAAGGCATCCCCCCTGACCAGCAGAGGCTCATCTTT 204412
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || |||||| |||||||||| | ||| | | ||||||||| |||||||||||||
Sbjct 204411 GCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAACATCCAGAAAGAGTCC 204352
Query 206365 ACTCTTCACCTTGT 206378
|| | ||||| ||
Sbjct 204351 ACCTTGCACCTGGT 204338
Score = 86.0 bits (94), Expect = 1e-11
Identities = 128/182 (70%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || || || || || || ||||| |||||||||| |||||| ||||
Sbjct 204303 AAGACCCTGACCGGCAAGACCATCACCCTGGAAGTGGAGCCCAGTGACACCATCGAGAAT 204244
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| || || |||||||| || || ||| || || || |||||
Sbjct 204243 GTGAAGGCCAAGATCCAGGATAAAGAAGGCATCCCCCCTGACCAGCAGAGGCTCATCTTT 204184
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || |||||| |||||||||| | ||| | | || |||||| |||||||||||||
Sbjct 204183 GCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGACTACAACATCCAGAAAGAGTCC 204124
Query 206365 AC 206366
||
Sbjct 204123 AC 204122
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179102584830394
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |