Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Galeopterus_20variegatus_20[refseq_20GCF_5F000696425.1_202014-06-05]
179,514 sequences; 3,187,660,572 total letters
Query= NC_026141.2
Length=4988
Score E
Sequences producing significant alignments: (Bits) Value
seq163782 109 2e-20
seq163734 105 2e-19
seq11438 98.7 3e-17
seq1877 98.7 3e-17
seq1029 98.7 3e-17
seq43 98.7 3e-17
seq3263 96.9 1e-16
seq368 91.5 5e-15
seq7636 89.7 2e-14
seq1577 89.7 2e-14
>seq163782
Length=535
Score = 109 bits (120), Expect = 2e-20
Identities = 68/73 (93%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827
||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 415 GGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 474
Query 2828 CCCGGGCTTCAGC 2840
|||||| ||| ||
Sbjct 475 CCCGGGTTTCGGC 487
>seq163734
Length=535
Score = 105 bits (116), Expect = 2e-19
Identities = 67/73 (92%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827
||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 415 GGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAAT 474
Query 2828 CCCGGGCTTCAGC 2840
|||||| ||| ||
Sbjct 475 CCCGGGTTTCGGC 487
>seq11438
Length=51889
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 2371 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 2430
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 2431 CCGGGTTTCGGC 2442
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 10271 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 10330
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 10331 CCGGGTTTCGGC 10342
>seq1877
Length=344973
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 274030 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 273971
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 273970 CCGGGTTTCGGC 273959
>seq1029
Length=469353
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 382563 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 382504
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 382503 CCGGGTTTCGGC 382492
>seq43
Length=1405944
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 1200358 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 1200299
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 1200298 CCGGGTTTCGGC 1200287
>seq3263
Length=243028
Score = 96.9 bits (106), Expect = 1e-16
Identities = 62/68 (91%), Gaps = 0/68 (0%)
Strand=Plus/Plus
Query 2773 AAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832
|| |||||||||||||||||| |||||||||||||||||||||||||||||| | |||||
Sbjct 117686 AAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATCCCGG 117745
Query 2833 GCTTCAGC 2840
| ||| ||
Sbjct 117746 GTTTCGGC 117753
>seq368
Length=708523
Score = 91.5 bits (100), Expect = 5e-15
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827
||| || |||||||| ||||||||| |||||||||||||||||||||||||||||| |
Sbjct 470797 GGCCGAGATAGCTCAGGTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGAT 470856
Query 2828 CCCGGGCTTCAGC 2840
|||||| ||| ||
Sbjct 470857 CCCGGGTTTCGGC 470869
>seq7636
Length=105097
Score = 89.7 bits (98), Expect = 2e-14
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|||||| ||||||||||||||||||||||||| |||||||| ||||| |||||||| |
Sbjct 43913 GCTGAAATAGCTCAGTTGGGAGAGCATTAGACCAAAGATCTACAGGTCACTGGTTCAGTC 43854
Query 2829 CCGGGCTTCAGC 2840
| ||| ||||||
Sbjct 43853 CAGGGTTTCAGC 43842
>seq1577
Length=384610
Score = 89.7 bits (98), Expect = 2e-14
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
||||| |||||||||||||||||| |||||||||| |||||||||||||||| || | |
Sbjct 297564 GCTGAGATAGCTCAGTTGGGAGAGCGTTAGACTGAAAATCTAAAGGTCCCTGGCTCCATC 297623
Query 2829 CCGGGCTTCAGC 2840
|| || ||||||
Sbjct 297624 CCAGGTTTCAGC 297635
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15818480350530
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |