Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Galeopterus_20variegatus_20[refseq_20GCF_5F000696425.1_202014-06-05]
179,514 sequences; 3,187,660,572 total letters
Query= NC_026421.1
Length=182380
Score E
Sequences producing significant alignments: (Bits) Value
seq964 306 4e-78
seq26565 197 2e-45
seq8862 185 1e-41
seq40139 163 3e-35
seq17702 163 3e-35
seq3344 163 3e-35
seq12448 154 2e-32
seq6625 136 5e-27
seq131279 96.9 4e-15
seq2524 84.2 3e-11
>seq964
Length=529263
Score = 306 bits (338), Expect = 4e-78
Identities = 259/319 (81%), Gaps = 0/319 (0%)
Strand=Plus/Plus
Query 171072 GTGGTGACCCAGGATGAGAGGGTGCTGCTGAACACGCCAGCCTCCCTGAAATGCTCCCTG 171131
||||||||||||||||| || | || ||||||||| || || ||| | | ||| || |||
Sbjct 295309 GTGGTGACCCAGGATGAAAGAGAGCAGCTGAACACACCTGCTTCCTTAAGATGTTCTCTG 295368
Query 171132 CAGACTTCTCAGGAGGTGCTGATTGTCACCTGGCAGAAAATCAAGCCCACCATTCCAGAG 171191
|| ||||||||||| || ||||||| || |||||||||| ||| | | | |||||
Sbjct 295369 CAAACTTCTCAGGAAGTCTTGATTGTGACATGGCAGAAAAAGAAGGCTGCAAGCCCAGAA 295428
Query 171192 AACATGATAACTTTTAGCAAAGACCACGGGGTGGTGGTCCAGCCGGCTTATAAGGACAAG 171251
|||||| | || || ||||| |||| ||||| ||||||||||| || ||||||||||||
Sbjct 295429 AACATGGTCACCTTCAGCAAGAACCATGGGGTTGTGGTCCAGCCTGCCTATAAGGACAAG 295488
Query 171252 ATAAACATCACCCAGCTTGGACTCCAAAACTCAACCATCACTTTTTGGAATACCACCTTA 171311
||||||||||| ||||| |||||||| |||||||||||||| |||||||| ||||||||
Sbjct 295489 ATAAACATCACTCAGCTGGGACTCCAGAACTCAACCATCACCTTTTGGAACACCACCTTG 295548
Query 171312 GAGGACGAGGGGTGCTACAACTGCCTCTTTAACACCTTTGGGTCTGGGAAAATCTCGGGG 171371
||||| || ||||| |||| || | ||| || |||||||| |||||||| ||||| ||
Sbjct 295549 GAGGATGAAGGGTGTTACATGTGTCACTTCAATACCTTTGGTTCTGGGAAGATCTCAGGA 295608
Query 171372 GTGGCCTGCCTCACCCTCT 171390
||||||||||| ||||
Sbjct 295609 ACAGCCTGCCTCACTCTCT 295627
Score = 197 bits (218), Expect = 2e-45
Identities = 210/277 (76%), Gaps = 0/277 (0%)
Strand=Plus/Plus
Query 171393 GTGCAGCCCACTGTGTTTCTGCATTATAAATTTTTTGATGACCACCTGAACATCACCTGT 171452
|| |||||||| || || || || || ||| | | ||| ||| |||| || ||||||||
Sbjct 300211 GTACAGCCCACAGTATTCCTTCACTACAAACTCTCTGAAGACAACCTAAATATCACCTGC 300270
Query 171453 TCTGCCAATGCCCGCCCGCCACCTCAGATTTTTTGGAAGATTTCGGGGTCAGAAATTGAA 171512
|| |||| ||||||||| | || ||| | |||||| || | ||||||| |||||
Sbjct 300271 TCCGCCACTGCCCGCCCAGCCCCCGTGATCTCCTGGAAGGTTGCTGGGTCAGGGATTGAG 300330
Query 171513 AACAGTAGCGAGGTTCTTTCCCATTCTAATGGAACTACTTCTGTAACCAGTGTACTCCAA 171572
|| |||| ||| ||| || || | ||||| || || ||||| ||||| | ||||||
Sbjct 300331 AATAGTACTGAGAGTCTCTCACACCCAAATGGGACCACATCTGTCACCAGCATCCTCCAA 300390
Query 171573 GTTAAAGACCCCAAGAGTCAGTTGGGAAAGGAGGTTATCTGCCAAGTGTGGCACCTGGGA 171632
|| |||||||||||||||||| |||| |||||||| |||||||| ||| |||||||||
Sbjct 300391 GTCAAAGACCCCAAGAGTCAGGTGGGGAAGGAGGTGATCTGCCAGGTGCTGCACCTGGGG 300450
Query 171633 AATGTAACTAACTTAAGGGAAACTGTAAGCAAGGGTA 171669
| ||| | ||||| ||| |||| || | ||| ||||
Sbjct 300451 ACTGTGTCCAACTTCAGGCAAACCGTGAACAAAGGTA 300487
>seq26565
Length=8755
Score = 197 bits (218), Expect = 2e-45
Identities = 210/277 (76%), Gaps = 0/277 (0%)
Strand=Plus/Plus
Query 171393 GTGCAGCCCACTGTGTTTCTGCATTATAAATTTTTTGATGACCACCTGAACATCACCTGT 171452
|| |||||||| || || || || || ||| | | ||| ||| |||| || ||||||||
Sbjct 8471 GTACAGCCCACAGTATTCCTTCACTACAAACTCTCTGAAGACAACCTAAATATCACCTGC 8530
Query 171453 TCTGCCAATGCCCGCCCGCCACCTCAGATTTTTTGGAAGATTTCGGGGTCAGAAATTGAA 171512
|| |||| ||||||||| | || ||| | |||||| || | ||||||| |||||
Sbjct 8531 TCCGCCACTGCCCGCCCAGCCCCCGTGATCTCCTGGAAGGTTGCTGGGTCAGGGATTGAG 8590
Query 171513 AACAGTAGCGAGGTTCTTTCCCATTCTAATGGAACTACTTCTGTAACCAGTGTACTCCAA 171572
|| |||| ||| ||| || || | ||||| || || ||||| ||||| | ||||||
Sbjct 8591 AATAGTACTGAGAGTCTCTCACACCCAAATGGGACCACATCTGTCACCAGCATCCTCCAA 8650
Query 171573 GTTAAAGACCCCAAGAGTCAGTTGGGAAAGGAGGTTATCTGCCAAGTGTGGCACCTGGGA 171632
|| |||||||||||||||||| |||| |||||||| |||||||| ||| |||||||||
Sbjct 8651 GTCAAAGACCCCAAGAGTCAGGTGGGGAAGGAGGTGATCTGCCAGGTGCTGCACCTGGGG 8710
Query 171633 AATGTAACTAACTTAAGGGAAACTGTAAGCAAGGGTA 171669
| ||| | ||||| ||| |||| || | ||| ||||
Sbjct 8711 ACTGTGTCCAACTTCAGGCAAACCGTGAACAAAGGTA 8747
>seq8862
Length=84653
Score = 185 bits (204), Expect = 1e-41
Identities = 209/277 (75%), Gaps = 5/277 (2%)
Strand=Plus/Plus
Query 146872 ATCTTGAGCTTGGGGAAGGGTCGGGGGTTCCTGGCC--AGCTGAATTTTCAGGGGCTCCA 146929
|| |||||||| ||||| |||| || | || || |||||||||||||| |||| |
Sbjct 48708 ATTTTGAGCTTCGGGAAAGGTCCTGGTT--CTCGCTGAAGCTGAATTTTCAGCCGCTCAA 48765
Query 146930 CGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGC 146989
||| | ||||| | || || || |||| | || |||||||| || |||| ||||
Sbjct 48766 TGTGAGTCAGGTAAATATGTGCATCTCCCAAATTATGTACAAAGTCACCTGGCTGCAGGC 48825
Query 146990 CGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCC 147049
| || | ||| || | |||||| |||||||| | ||||||| |||||||| || || |
Sbjct 48826 CCGTGA-GTGCGCGATCATGTACGTGAGCAGTGCATAGCTGGTGATGTTGAAAGGCACGC 48884
Query 147050 CCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGT 147109
||||||||||||| || |||||||||| ||||||||| || ||||| |||| | | ||
Sbjct 48885 CCAGGCCCATGTCTCCTGACCTCTGGTGCAGCTGGCAGGACAGCTCACCGTTCACTATGT 48944
Query 147110 AAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCAT 147146
| | |||||| ||| || ||||| |||||||||||
Sbjct 48945 AGAGCTGGCAGAGGGCATGACACGGAGGCAGCGCCAT 48981
>seq40139
Length=6180
Score = 163 bits (180), Expect = 3e-35
Identities = 135/165 (82%), Gaps = 0/165 (0%)
Strand=Plus/Minus
Query 146982 CTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAA 147041
||| ||||| || ||||| || | |||||| ||||| |||| |||||||| ||||||||
Sbjct 1012 CTTCAGGCCTGTGACGTGCGCGATCATGTACGTGAGAAGCGCATAGCTGGCGATGTTGAA 953
Query 147042 GGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTC 147101
|| || || ||||||||||| || |||||||||||||||||||| || ||||| ||||
Sbjct 952 AGGCACGCCGAGGCCCATGTCTCCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCGTT 893
Query 147102 GGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCAT 147146
||||||| |||||||| ||| |||||||| |||||| ||||
Sbjct 892 CACCACGTAGAACTGGCAGAGGGCATGGCACGGAGGCAGCACCAT 848
>seq17702
Length=18075
Score = 163 bits (180), Expect = 3e-35
Identities = 135/165 (82%), Gaps = 0/165 (0%)
Strand=Plus/Minus
Query 146982 CTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAA 147041
||| ||||| || ||||| || | |||||| ||||| |||| |||||||| ||||||||
Sbjct 13256 CTTCAGGCCTGTGACGTGCGCGATCATGTACGTGAGAAGCGCATAGCTGGCGATGTTGAA 13197
Query 147042 GGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTC 147101
|| || || ||||||||||| || |||||||||||||||||||| || ||||| ||||
Sbjct 13196 AGGCACGCCGAGGCCCATGTCTCCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCGTT 13137
Query 147102 GGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCAT 147146
||||||| |||||||| ||| |||||||| |||||| ||||
Sbjct 13136 CACCACGTAGAACTGGCAGAGGGCATGGCACGGAGGCAGCACCAT 13092
Score = 95.1 bits (104), Expect = 1e-14
Identities = 117/160 (73%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 147283 GCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGC 147342
|||||||| ||||||||||||||||| || ||||| || ||||| || ||||
Sbjct 9613 GCCCCAAAATGCCTCCACTGGAAGCCATAAACTGGGCCGAGGTCCCCTTCTACTCTGGTG 9554
Query 147343 GAGAAGCCCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCC 147402
||||| ||| | | ||||| || |||| |||| ||| |||||||| |||||||
Sbjct 9553 GAGAATCCCAGGCTGTCCAGAAAGTCTCGGGAACCGTTGGCATCCCAGATCTTCACTCCC 9494
Query 147403 TTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGA 147442
|||| ||||| || |||| | ||||| ||| ||| ||
Sbjct 9493 TTGGAAGAGAGTTCTTTAGCATTTGTGGATCCCTGGAAGA 9454
>seq3344
Length=239081
Score = 163 bits (180), Expect = 3e-35
Identities = 135/167 (81%), Gaps = 12/167 (7%)
Strand=Plus/Minus
Query 178231 AGGGTTACTTGGGTTGCCAGGCCTTGTCAGAGATGATTCAGTTTTACTTGGAGGAGGTGA 178290
|||||||| |||||||||| ||||||||||||||||| ||||||||| ||||||||||||
Sbjct 170967 AGGGTTACCTGGGTTGCCAAGCCTTGTCAGAGATGATCCAGTTTTACCTGGAGGAGGTGA 170908
Query 178291 TGCCTCAGGCCGAGAATCACAGCGGGGGTGGAGGCCCGGACATTAAGGAGCATGTAAACT 178350
|||| ||||| ||||| ||| | ||| ||||| ||||| ||||| ||||
Sbjct 170907 TGCCCCAGGCTGAGAACCAC------------GACCCAGACATCAAGGAACATGTGAACT 170860
Query 178351 CTCTGGGGGAAAAGCTAAAGACCCTTAGAGTGAGGCTGCGGCGATGT 178397
| ||||| ||||| || |||||||| || ||||||||||||| |||
Sbjct 170859 CCCTGGGAGAAAAACTGAAGACCCTCAGGCTGAGGCTGCGGCGCTGT 170813
Score = 98.7 bits (108), Expect = 1e-15
Identities = 74/87 (85%), Gaps = 0/87 (0%)
Strand=Plus/Minus
Query 178462 AGCTTCAAGAAAAGGGTGTTTACAAAGCTATGAGTGAGTTTGATATTTTTATTAACTACA 178521
|||| ||||| || ||||| |||||||| |||||||||||||| || ||||| |||||||
Sbjct 168578 AGCTCCAAGAGAAAGGTGTCTACAAAGCCATGAGTGAGTTTGACATCTTTATCAACTACA 168519
Query 178522 TAGAAGCTTACATGACAACAAAAATGA 178548
|||||| |||||||||| || ||||
Sbjct 168518 TAGAAGACTACATGACAATGAAGATGA 168492
>seq12448
Length=43075
Score = 154 bits (170), Expect = 2e-32
Identities = 133/165 (81%), Gaps = 0/165 (0%)
Strand=Plus/Plus
Query 146982 CTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAA 147041
||| ||||| || ||||| || | |||||| ||||| |||| |||||||| ||||||||
Sbjct 9227 CTTCAGGCCTGTGACGTGCGCGATCATGTACGTGAGAAGCGCATAGCTGGCGATGTTGAA 9286
Query 147042 GGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTC 147101
|| || || ||||||||||| || |||||||||||||||||||| || ||||| || |
Sbjct 9287 AGGCACGCCGAGGCCCATGTCTCCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCATT 9346
Query 147102 GGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCAT 147146
||||||| || ||||| ||| |||||||| |||||| ||||
Sbjct 9347 CACCACGTAGAATTGGCAGAGGGCATGGCACGGAGGCAGCACCAT 9391
Score = 95.1 bits (104), Expect = 1e-14
Identities = 117/160 (73%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 147283 GCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGC 147342
|||||||| ||||||||||||||||| || ||||| || ||||| || ||||
Sbjct 12962 GCCCCAAAATGCCTCCACTGGAAGCCATAAACTGGGCCGAGGTCCCCTTCTACTCTGGTG 13021
Query 147343 GAGAAGCCCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCC 147402
||||| ||| | | ||||| || |||| |||| ||| |||||||| |||||||
Sbjct 13022 GAGAATCCCAGGCTGTCCAGAAAGTCTCGGGAACCGTTGGCATCCCAGATCTTCACTCCC 13081
Query 147403 TTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGA 147442
|||| ||||| || |||| | ||||| ||| ||| ||
Sbjct 13082 TTGGAAGAGAGTTCTTTAGCATTTGTGGATCCCTGGAAGA 13121
>seq6625
Length=125938
Score = 136 bits (150), Expect = 5e-27
Identities = 125/158 (79%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 8610 GTACTCTCTGGTGTTTTTGTTTGGGCTAATTGGCAATGCCCTGGTGATCCTAGTCCTCAT 8669
|||||| ||||||||| | |||| | ||||||||| ||||||| |||| |||||| |
Sbjct 92317 GTACTCGCTGGTGTTTGTCATTGGCGTGGTTGGCAATGTCCTGGTGGTCCTGGTCCTCTT 92258
Query 8670 AAAGTACAAGAGGCTCAGGATCATGACCAACATCTTCCTGTTCAACCTGGCCCTTGGTGA 8729
|| ||||||||||||| | |||||||| ||||| ||| ||||||||||| || |||
Sbjct 92257 GCAGCACAAGAGGCTCAGAAGCATGACCAGCATCTACCTCCTCAACCTGGCCGTTTCTGA 92198
Query 8730 CCTGCTGCTGATTTTCACCCTCCCCTTTTGGATTCACT 8767
|||||| | | ||||| || ||||| |||||| |||
Sbjct 92197 CCTGCTCTTCCTCTTCACGCTGCCCTTCTGGATTGACT 92160
>seq131279
Length=636
Score = 96.9 bits (106), Expect = 4e-15
Identities = 136/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 147373 GACCCGTGGGCGTCCCAGATGCCCACTCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAG 147432
|| |||| ||| |||||||| ||||||||||| ||||||| || | || |||||
Sbjct 58 GAACCGTTGGCATCCCAGATCTTCACTCCCTTGGAAGAGAGCTTTTTCGTGTTTGTGGAT 117
Query 147433 CCCCGGATGAACCAGAGCAGCTCCTCCAAAACCCCCCTCCAAAAGACCCTCTTGGTGGTC 147492
| ||| ||||| |||||||| | ||||| ||| |||| || || ||||| |||
Sbjct 118 CTTTTGATAAACCACAGCAGCTCTTTCAAAATACCCTTCCAGAACACAGCTTTGGTTGTC 177
Query 147493 AGCAGGGGGAACTGGTCCCTCAGCGAATACCTCGCCTGGTCCCCAAACACAGACAGCGTG 147552
|||||| | || | || || || || |||||| | ||||| ||||| |||
Sbjct 178 AGCAGGTGAAATTCATCTCTGAGGCTGTAGTGCGCCTGCAGGCAGAACACCGACAGGGTG 237
Query 147553 CCCGTGCCCGT 147563
|||||||||||
Sbjct 238 CCCGTGCCCGT 248
>seq2524
Length=291027
Score = 84.2 bits (92), Expect = 3e-11
Identities = 109/151 (72%), Gaps = 0/151 (0%)
Strand=Plus/Minus
Query 8617 CTGGTGTTTTTGTTTGGGCTAATTGGCAATGCCCTGGTGATCCTAGTCCTCATAAAGTAC 8676
|||||||| | |||| || | ||||| | | ||| | | |||||| ||| |||
Sbjct 284622 CTGGTGTTCATCGTTGGCCTCTTGGGCAACGTGGTAGTGGTGGTGATCCTCACAAAATAC 284563
Query 8677 AAGAGGCTCAGGATCATGACCAACATCTTCCTGTTCAACCTGGCCCTTGGTGACCTGCTG 8736
| |||||||||||| ||||||||||||| |||| ||||| |||| | |||| ||||
Sbjct 284562 AGGAGGCTCAGGATTATGACCAACATCTACCTGCTCAACTTGGCAATCTCTGACTTGCTT 284503
Query 8737 CTGATTTTCACCCTCCCCTTTTGGATTCACT 8767
| | ||||| || || || ||| || |||
Sbjct 284502 TTTCTCTTCACGCTTCCATTCTGGGTTTACT 284472
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 582178696689600
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