Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galeopterus_20variegatus_20[refseq_20GCF_5F000696425.1_202014-06-05] 179,514 sequences; 3,187,660,572 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq964 306 4e-78 seq26565 197 2e-45 seq8862 185 1e-41 seq40139 163 3e-35 seq17702 163 3e-35 seq3344 163 3e-35 seq12448 154 2e-32 seq6625 136 5e-27 seq131279 96.9 4e-15 seq2524 84.2 3e-11 >seq964 Length=529263 Score = 306 bits (338), Expect = 4e-78 Identities = 259/319 (81%), Gaps = 0/319 (0%) Strand=Plus/Plus Query 171072 GTGGTGACCCAGGATGAGAGGGTGCTGCTGAACACGCCAGCCTCCCTGAAATGCTCCCTG 171131 ||||||||||||||||| || | || ||||||||| || || ||| | | ||| || ||| Sbjct 295309 GTGGTGACCCAGGATGAAAGAGAGCAGCTGAACACACCTGCTTCCTTAAGATGTTCTCTG 295368 Query 171132 CAGACTTCTCAGGAGGTGCTGATTGTCACCTGGCAGAAAATCAAGCCCACCATTCCAGAG 171191 || ||||||||||| || ||||||| || |||||||||| ||| | | | ||||| Sbjct 295369 CAAACTTCTCAGGAAGTCTTGATTGTGACATGGCAGAAAAAGAAGGCTGCAAGCCCAGAA 295428 Query 171192 AACATGATAACTTTTAGCAAAGACCACGGGGTGGTGGTCCAGCCGGCTTATAAGGACAAG 171251 |||||| | || || ||||| |||| ||||| ||||||||||| || |||||||||||| Sbjct 295429 AACATGGTCACCTTCAGCAAGAACCATGGGGTTGTGGTCCAGCCTGCCTATAAGGACAAG 295488 Query 171252 ATAAACATCACCCAGCTTGGACTCCAAAACTCAACCATCACTTTTTGGAATACCACCTTA 171311 ||||||||||| ||||| |||||||| |||||||||||||| |||||||| |||||||| Sbjct 295489 ATAAACATCACTCAGCTGGGACTCCAGAACTCAACCATCACCTTTTGGAACACCACCTTG 295548 Query 171312 GAGGACGAGGGGTGCTACAACTGCCTCTTTAACACCTTTGGGTCTGGGAAAATCTCGGGG 171371 ||||| || ||||| |||| || | ||| || |||||||| |||||||| ||||| || Sbjct 295549 GAGGATGAAGGGTGTTACATGTGTCACTTCAATACCTTTGGTTCTGGGAAGATCTCAGGA 295608 Query 171372 GTGGCCTGCCTCACCCTCT 171390 ||||||||||| |||| Sbjct 295609 ACAGCCTGCCTCACTCTCT 295627 Score = 197 bits (218), Expect = 2e-45 Identities = 210/277 (76%), Gaps = 0/277 (0%) Strand=Plus/Plus Query 171393 GTGCAGCCCACTGTGTTTCTGCATTATAAATTTTTTGATGACCACCTGAACATCACCTGT 171452 || |||||||| || || || || || ||| | | ||| ||| |||| || |||||||| Sbjct 300211 GTACAGCCCACAGTATTCCTTCACTACAAACTCTCTGAAGACAACCTAAATATCACCTGC 300270 Query 171453 TCTGCCAATGCCCGCCCGCCACCTCAGATTTTTTGGAAGATTTCGGGGTCAGAAATTGAA 171512 || |||| ||||||||| | || ||| | |||||| || | ||||||| ||||| Sbjct 300271 TCCGCCACTGCCCGCCCAGCCCCCGTGATCTCCTGGAAGGTTGCTGGGTCAGGGATTGAG 300330 Query 171513 AACAGTAGCGAGGTTCTTTCCCATTCTAATGGAACTACTTCTGTAACCAGTGTACTCCAA 171572 || |||| ||| ||| || || | ||||| || || ||||| ||||| | |||||| Sbjct 300331 AATAGTACTGAGAGTCTCTCACACCCAAATGGGACCACATCTGTCACCAGCATCCTCCAA 300390 Query 171573 GTTAAAGACCCCAAGAGTCAGTTGGGAAAGGAGGTTATCTGCCAAGTGTGGCACCTGGGA 171632 || |||||||||||||||||| |||| |||||||| |||||||| ||| ||||||||| Sbjct 300391 GTCAAAGACCCCAAGAGTCAGGTGGGGAAGGAGGTGATCTGCCAGGTGCTGCACCTGGGG 300450 Query 171633 AATGTAACTAACTTAAGGGAAACTGTAAGCAAGGGTA 171669 | ||| | ||||| ||| |||| || | ||| |||| Sbjct 300451 ACTGTGTCCAACTTCAGGCAAACCGTGAACAAAGGTA 300487 >seq26565 Length=8755 Score = 197 bits (218), Expect = 2e-45 Identities = 210/277 (76%), Gaps = 0/277 (0%) Strand=Plus/Plus Query 171393 GTGCAGCCCACTGTGTTTCTGCATTATAAATTTTTTGATGACCACCTGAACATCACCTGT 171452 || |||||||| || || || || || ||| | | ||| ||| |||| || |||||||| Sbjct 8471 GTACAGCCCACAGTATTCCTTCACTACAAACTCTCTGAAGACAACCTAAATATCACCTGC 8530 Query 171453 TCTGCCAATGCCCGCCCGCCACCTCAGATTTTTTGGAAGATTTCGGGGTCAGAAATTGAA 171512 || |||| ||||||||| | || ||| | |||||| || | ||||||| ||||| Sbjct 8531 TCCGCCACTGCCCGCCCAGCCCCCGTGATCTCCTGGAAGGTTGCTGGGTCAGGGATTGAG 8590 Query 171513 AACAGTAGCGAGGTTCTTTCCCATTCTAATGGAACTACTTCTGTAACCAGTGTACTCCAA 171572 || |||| ||| ||| || || | ||||| || || ||||| ||||| | |||||| Sbjct 8591 AATAGTACTGAGAGTCTCTCACACCCAAATGGGACCACATCTGTCACCAGCATCCTCCAA 8650 Query 171573 GTTAAAGACCCCAAGAGTCAGTTGGGAAAGGAGGTTATCTGCCAAGTGTGGCACCTGGGA 171632 || |||||||||||||||||| |||| |||||||| |||||||| ||| ||||||||| Sbjct 8651 GTCAAAGACCCCAAGAGTCAGGTGGGGAAGGAGGTGATCTGCCAGGTGCTGCACCTGGGG 8710 Query 171633 AATGTAACTAACTTAAGGGAAACTGTAAGCAAGGGTA 171669 | ||| | ||||| ||| |||| || | ||| |||| Sbjct 8711 ACTGTGTCCAACTTCAGGCAAACCGTGAACAAAGGTA 8747 >seq8862 Length=84653 Score = 185 bits (204), Expect = 1e-41 Identities = 209/277 (75%), Gaps = 5/277 (2%) Strand=Plus/Plus Query 146872 ATCTTGAGCTTGGGGAAGGGTCGGGGGTTCCTGGCC--AGCTGAATTTTCAGGGGCTCCA 146929 || |||||||| ||||| |||| || | || || |||||||||||||| |||| | Sbjct 48708 ATTTTGAGCTTCGGGAAAGGTCCTGGTT--CTCGCTGAAGCTGAATTTTCAGCCGCTCAA 48765 Query 146930 CGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGC 146989 ||| | ||||| | || || || |||| | || |||||||| || |||| |||| Sbjct 48766 TGTGAGTCAGGTAAATATGTGCATCTCCCAAATTATGTACAAAGTCACCTGGCTGCAGGC 48825 Query 146990 CGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCC 147049 | || | ||| || | |||||| |||||||| | ||||||| |||||||| || || | Sbjct 48826 CCGTGA-GTGCGCGATCATGTACGTGAGCAGTGCATAGCTGGTGATGTTGAAAGGCACGC 48884 Query 147050 CCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGT 147109 ||||||||||||| || |||||||||| ||||||||| || ||||| |||| | | || Sbjct 48885 CCAGGCCCATGTCTCCTGACCTCTGGTGCAGCTGGCAGGACAGCTCACCGTTCACTATGT 48944 Query 147110 AAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCAT 147146 | | |||||| ||| || ||||| ||||||||||| Sbjct 48945 AGAGCTGGCAGAGGGCATGACACGGAGGCAGCGCCAT 48981 >seq40139 Length=6180 Score = 163 bits (180), Expect = 3e-35 Identities = 135/165 (82%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 146982 CTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAA 147041 ||| ||||| || ||||| || | |||||| ||||| |||| |||||||| |||||||| Sbjct 1012 CTTCAGGCCTGTGACGTGCGCGATCATGTACGTGAGAAGCGCATAGCTGGCGATGTTGAA 953 Query 147042 GGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTC 147101 || || || ||||||||||| || |||||||||||||||||||| || ||||| |||| Sbjct 952 AGGCACGCCGAGGCCCATGTCTCCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCGTT 893 Query 147102 GGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCAT 147146 ||||||| |||||||| ||| |||||||| |||||| |||| Sbjct 892 CACCACGTAGAACTGGCAGAGGGCATGGCACGGAGGCAGCACCAT 848 >seq17702 Length=18075 Score = 163 bits (180), Expect = 3e-35 Identities = 135/165 (82%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 146982 CTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAA 147041 ||| ||||| || ||||| || | |||||| ||||| |||| |||||||| |||||||| Sbjct 13256 CTTCAGGCCTGTGACGTGCGCGATCATGTACGTGAGAAGCGCATAGCTGGCGATGTTGAA 13197 Query 147042 GGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTC 147101 || || || ||||||||||| || |||||||||||||||||||| || ||||| |||| Sbjct 13196 AGGCACGCCGAGGCCCATGTCTCCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCGTT 13137 Query 147102 GGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCAT 147146 ||||||| |||||||| ||| |||||||| |||||| |||| Sbjct 13136 CACCACGTAGAACTGGCAGAGGGCATGGCACGGAGGCAGCACCAT 13092 Score = 95.1 bits (104), Expect = 1e-14 Identities = 117/160 (73%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 147283 GCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGC 147342 |||||||| ||||||||||||||||| || ||||| || ||||| || |||| Sbjct 9613 GCCCCAAAATGCCTCCACTGGAAGCCATAAACTGGGCCGAGGTCCCCTTCTACTCTGGTG 9554 Query 147343 GAGAAGCCCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCC 147402 ||||| ||| | | ||||| || |||| |||| ||| |||||||| ||||||| Sbjct 9553 GAGAATCCCAGGCTGTCCAGAAAGTCTCGGGAACCGTTGGCATCCCAGATCTTCACTCCC 9494 Query 147403 TTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGA 147442 |||| ||||| || |||| | ||||| ||| ||| || Sbjct 9493 TTGGAAGAGAGTTCTTTAGCATTTGTGGATCCCTGGAAGA 9454 >seq3344 Length=239081 Score = 163 bits (180), Expect = 3e-35 Identities = 135/167 (81%), Gaps = 12/167 (7%) Strand=Plus/Minus Query 178231 AGGGTTACTTGGGTTGCCAGGCCTTGTCAGAGATGATTCAGTTTTACTTGGAGGAGGTGA 178290 |||||||| |||||||||| ||||||||||||||||| ||||||||| |||||||||||| Sbjct 170967 AGGGTTACCTGGGTTGCCAAGCCTTGTCAGAGATGATCCAGTTTTACCTGGAGGAGGTGA 170908 Query 178291 TGCCTCAGGCCGAGAATCACAGCGGGGGTGGAGGCCCGGACATTAAGGAGCATGTAAACT 178350 |||| ||||| ||||| ||| | ||| ||||| ||||| ||||| |||| Sbjct 170907 TGCCCCAGGCTGAGAACCAC------------GACCCAGACATCAAGGAACATGTGAACT 170860 Query 178351 CTCTGGGGGAAAAGCTAAAGACCCTTAGAGTGAGGCTGCGGCGATGT 178397 | ||||| ||||| || |||||||| || ||||||||||||| ||| Sbjct 170859 CCCTGGGAGAAAAACTGAAGACCCTCAGGCTGAGGCTGCGGCGCTGT 170813 Score = 98.7 bits (108), Expect = 1e-15 Identities = 74/87 (85%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 178462 AGCTTCAAGAAAAGGGTGTTTACAAAGCTATGAGTGAGTTTGATATTTTTATTAACTACA 178521 |||| ||||| || ||||| |||||||| |||||||||||||| || ||||| ||||||| Sbjct 168578 AGCTCCAAGAGAAAGGTGTCTACAAAGCCATGAGTGAGTTTGACATCTTTATCAACTACA 168519 Query 178522 TAGAAGCTTACATGACAACAAAAATGA 178548 |||||| |||||||||| || |||| Sbjct 168518 TAGAAGACTACATGACAATGAAGATGA 168492 >seq12448 Length=43075 Score = 154 bits (170), Expect = 2e-32 Identities = 133/165 (81%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 146982 CTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAA 147041 ||| ||||| || ||||| || | |||||| ||||| |||| |||||||| |||||||| Sbjct 9227 CTTCAGGCCTGTGACGTGCGCGATCATGTACGTGAGAAGCGCATAGCTGGCGATGTTGAA 9286 Query 147042 GGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTC 147101 || || || ||||||||||| || |||||||||||||||||||| || ||||| || | Sbjct 9287 AGGCACGCCGAGGCCCATGTCTCCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCATT 9346 Query 147102 GGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCAT 147146 ||||||| || ||||| ||| |||||||| |||||| |||| Sbjct 9347 CACCACGTAGAATTGGCAGAGGGCATGGCACGGAGGCAGCACCAT 9391 Score = 95.1 bits (104), Expect = 1e-14 Identities = 117/160 (73%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 147283 GCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGC 147342 |||||||| ||||||||||||||||| || ||||| || ||||| || |||| Sbjct 12962 GCCCCAAAATGCCTCCACTGGAAGCCATAAACTGGGCCGAGGTCCCCTTCTACTCTGGTG 13021 Query 147343 GAGAAGCCCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCC 147402 ||||| ||| | | ||||| || |||| |||| ||| |||||||| ||||||| Sbjct 13022 GAGAATCCCAGGCTGTCCAGAAAGTCTCGGGAACCGTTGGCATCCCAGATCTTCACTCCC 13081 Query 147403 TTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGA 147442 |||| ||||| || |||| | ||||| ||| ||| || Sbjct 13082 TTGGAAGAGAGTTCTTTAGCATTTGTGGATCCCTGGAAGA 13121 >seq6625 Length=125938 Score = 136 bits (150), Expect = 5e-27 Identities = 125/158 (79%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 8610 GTACTCTCTGGTGTTTTTGTTTGGGCTAATTGGCAATGCCCTGGTGATCCTAGTCCTCAT 8669 |||||| ||||||||| | |||| | ||||||||| ||||||| |||| |||||| | Sbjct 92317 GTACTCGCTGGTGTTTGTCATTGGCGTGGTTGGCAATGTCCTGGTGGTCCTGGTCCTCTT 92258 Query 8670 AAAGTACAAGAGGCTCAGGATCATGACCAACATCTTCCTGTTCAACCTGGCCCTTGGTGA 8729 || ||||||||||||| | |||||||| ||||| ||| ||||||||||| || ||| Sbjct 92257 GCAGCACAAGAGGCTCAGAAGCATGACCAGCATCTACCTCCTCAACCTGGCCGTTTCTGA 92198 Query 8730 CCTGCTGCTGATTTTCACCCTCCCCTTTTGGATTCACT 8767 |||||| | | ||||| || ||||| |||||| ||| Sbjct 92197 CCTGCTCTTCCTCTTCACGCTGCCCTTCTGGATTGACT 92160 >seq131279 Length=636 Score = 96.9 bits (106), Expect = 4e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 147373 GACCCGTGGGCGTCCCAGATGCCCACTCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAG 147432 || |||| ||| |||||||| ||||||||||| ||||||| || | || ||||| Sbjct 58 GAACCGTTGGCATCCCAGATCTTCACTCCCTTGGAAGAGAGCTTTTTCGTGTTTGTGGAT 117 Query 147433 CCCCGGATGAACCAGAGCAGCTCCTCCAAAACCCCCCTCCAAAAGACCCTCTTGGTGGTC 147492 | ||| ||||| |||||||| | ||||| ||| |||| || || ||||| ||| Sbjct 118 CTTTTGATAAACCACAGCAGCTCTTTCAAAATACCCTTCCAGAACACAGCTTTGGTTGTC 177 Query 147493 AGCAGGGGGAACTGGTCCCTCAGCGAATACCTCGCCTGGTCCCCAAACACAGACAGCGTG 147552 |||||| | || | || || || || |||||| | ||||| ||||| ||| Sbjct 178 AGCAGGTGAAATTCATCTCTGAGGCTGTAGTGCGCCTGCAGGCAGAACACCGACAGGGTG 237 Query 147553 CCCGTGCCCGT 147563 ||||||||||| Sbjct 238 CCCGTGCCCGT 248 >seq2524 Length=291027 Score = 84.2 bits (92), Expect = 3e-11 Identities = 109/151 (72%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 8617 CTGGTGTTTTTGTTTGGGCTAATTGGCAATGCCCTGGTGATCCTAGTCCTCATAAAGTAC 8676 |||||||| | |||| || | ||||| | | ||| | | |||||| ||| ||| Sbjct 284622 CTGGTGTTCATCGTTGGCCTCTTGGGCAACGTGGTAGTGGTGGTGATCCTCACAAAATAC 284563 Query 8677 AAGAGGCTCAGGATCATGACCAACATCTTCCTGTTCAACCTGGCCCTTGGTGACCTGCTG 8736 | |||||||||||| ||||||||||||| |||| ||||| |||| | |||| |||| Sbjct 284562 AGGAGGCTCAGGATTATGACCAACATCTACCTGCTCAACTTGGCAATCTCTGACTTGCTT 284503 Query 8737 CTGATTTTCACCCTCCCCTTTTGGATTCACT 8767 | | ||||| || || || ||| || ||| Sbjct 284502 TTTCTCTTCACGCTTCCATTCTGGGTTTACT 284472 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582178696689600