Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Galeopterus_20variegatus_20[refseq_20GCF_5F000696425.1_202014-06-05]
179,514 sequences; 3,187,660,572 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq1029 98.7 9e-16
seq633 98.7 9e-16
seq9005 82.4 7e-11
>seq1029
Length=469353
Score = 98.7 bits (108), Expect = 9e-16
Identities = 137/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
||| || ||||||||||| || | || ||| || | || |||||||| || || |||||
Sbjct 371646 CTCTTTCTGAATGTTGTAGTCAGACAGGGTGCGTCCATCTTCCAGCTGTTTCCCAGCAAA 371705
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
||||||| ||||||||| | || | | ||||||||| |||||| ||| | |
Sbjct 371706 GATCAACCTCTGCTGGTCAGGGGGGATCCCCTCCTTGTCTTGGATCTTGGCCTTGACGTT 371765
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | ||||| || | || ||||| | ||||| || || || |||| || |||||
Sbjct 371766 CTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 371825
Query 35725 AAATATCTGCAT 35736
|| ||||||||
Sbjct 371826 GAAGATCTGCAT 371837
>seq633
Length=582679
Score = 98.7 bits (108), Expect = 9e-16
Identities = 150/214 (70%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586
||||| || || || ||| || || ||||||||||| | | || || | || ||
Sbjct 204337 CACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTC 204396
Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646
||||||||| || ||||| || | || ||||||||| | || | || || || |||
Sbjct 204397 CAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCTTTATCCTG 204456
Query 35647 GATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706
|||||| ||||| | | | | ||||| || | ||||| |||| ||||| || ||
Sbjct 204457 GATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTCTT 204516
Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740
|| |||| ||| ||||| || || |||||| ||
Sbjct 204517 GCCGGTCAGAGTCTTCACGAAAATTTGCATTTTG 204550
Score = 89.7 bits (98), Expect = 5e-13
Identities = 135/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
||| || || |||||||| || | | || || | || ||||||||||| || |||||
Sbjct 204127 CTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAA 204186
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | || ||||||||| | || | || || || ||| |||||| ||||| | |
Sbjct 204187 GATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCTTTATCCTGGATCTTGGCCTTCACATT 204246
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | ||||| || | ||||| |||| ||||| || || || |||| || |||||
Sbjct 204247 CTCGATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 204306
Query 35725 AAATATCTGCAT 35736
|| ||||||||
Sbjct 204307 GAAGATCTGCAT 204318
>seq9005
Length=82358
Score = 82.4 bits (90), Expect = 7e-11
Identities = 114/156 (73%), Gaps = 3/156 (2%)
Strand=Plus/Plus
Query 35582 TCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTG 35641
|| |||||||| || ||||||||||||| |||||||||| | || | || |||||||
Sbjct 12395 TCCTCCAGCTGTTTGCCCGCAAATATCAGATGCTGCTGGTCAGCTGGGATGCCCTCCTTG 12454
Query 35642 TCCATGATCTTTTGC-TTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGAT 35700
| | || |||| || || | | | | ||||| || | || |||| || |||||
Sbjct 12455 T-CTTGGACTTTGGCGTTGACATTCTTGATGGTGTCACTGGGCTCGACCT-CAAGGTGAT 12512
Query 35701 CGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| || |||||||| || | |||||| ||||||||
Sbjct 12513 GGTCTTGCCCGTCAAGGTCTCCACAAAGATCTGCAT 12548
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449782052971120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |