Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Galeopterus_20variegatus_20[refseq_20GCF_5F000696425.1_202014-06-05]
179,514 sequences; 3,187,660,572 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq633 114 1e-20
seq1029 104 2e-17
>seq633
Length=582679
Score = 114 bits (126), Expect = 1e-20
Identities = 164/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| |||||||| || | ||| ||||| | ||||| || || || |||||||| || |
Sbjct 204320 CCACCTCTGAGACGGAGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAATCAGAA 204379
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| | || || ||||| ||||||||||| || | | |||||| || || ||
Sbjct 204380 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGG 204439
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||||||||| || || || || || || || | ||||| | |||||
Sbjct 204440 ATGCCTTCTTTATCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCCACT 204499
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717
|| || || ||||| || ||||| | ||| || ||||||||||||||||||
Sbjct 204500 TCCAGGGTGATGGTCTTGCCGGTCAGAGTCTTCACGAAAATTTGCATTTTG 204550
>seq1029
Length=469353
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| |||||||| || | ||| ||||| | ||||| || || || |||||||||||
Sbjct 372067 CCACCTCTGAGACGGAGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGAC 372126
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| || || || |||||||| || || || ||||| | |||||| || || ||
Sbjct 372127 AGGGTGCGACCATCTTCCAGCTGTTTCCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGG 372186
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| || || ||||| || || ||||| || | ||||| | || ||
Sbjct 372187 ATGCCCTCCTTGTCTTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCGACC 372246
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| || ||||| || ||||| | || || ||||| || |||||
Sbjct 372247 TCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 372293
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| |||||||| || | ||| ||||| | ||||| || || || |||||||||||
Sbjct 372295 CCACCTCTGAGACGGAGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGAC 372354
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| || || || |||||||| || || || ||||| | |||||| || || ||
Sbjct 372355 AGGGTGCGACCATCTTCCAGCTGTTTCCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGG 372414
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| || || ||||| || || ||||| || | ||||| | || ||
Sbjct 372415 ATGCCCTCCTTGTCTTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCGACC 372474
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| || ||||| || ||||| | || || ||||| || |||||
Sbjct 372475 TCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 372521
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| |||||||| || | ||| ||||| | ||||| || || || |||||||||||
Sbjct 372523 CCACCTCTGAGACGGAGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGAC 372582
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| || || || |||||||| || || || ||||| | |||||| || || ||
Sbjct 372583 AGGGTGCGACCATCTTCCAGCTGTTTCCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGG 372642
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| || || ||||| || || ||||| || | ||||| | || ||
Sbjct 372643 ATGCCCTCCTTGTCTTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCGACC 372702
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| || ||||| || ||||| | || || ||||| || |||||
Sbjct 372703 TCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 372749
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| |||||||| || | ||| ||||| | ||||| || || || |||||||||||
Sbjct 372751 CCACCTCTGAGACGGAGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGAC 372810
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| || || || |||||||| || || || ||||| | |||||| || || ||
Sbjct 372811 AGGGTGCGACCATCTTCCAGCTGTTTCCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGG 372870
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| || || ||||| || || ||||| || | ||||| | || ||
Sbjct 372871 ATGCCCTCCTTGTCTTGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCGACC 372930
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714
||||| || ||||| || ||||| | || || || || || ||||||
Sbjct 372931 TCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACAAAGATCTGCATT 372978
Score = 98.7 bits (108), Expect = 1e-15
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| |||||||| || | ||| ||||| | ||||| || || || |||||||||||
Sbjct 371839 CCACCTCTGAGACGGAGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGAC 371898
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| || || || |||||||| || || || ||||| | |||||| || || ||
Sbjct 371899 AGGGTGCGACCATCTTCCAGCTGTTTCCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGG 371958
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| || || || ||||| || || ||||| || | ||||| | || ||
Sbjct 371959 ATCCCCTCCTTGTCTTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCGACC 372018
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| || ||||| || ||||| | || || ||||| || |||||
Sbjct 372019 TCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 372065
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 134499 CGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAG 134558
|||| || | ||| || ||||| || || |||||||||||||| | |||| |
Sbjct 371623 CGCAGGACCAAGTGCAGAGTGGACTCTTTCTGAATGTTGTAGTCAGACAGGGTGCGTCCA 371682
Query 134559 TCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTT 134618
|| || |||||||| || ||||| ||||| | |||||| || || || || || || ||
Sbjct 371683 TCTTCCAGCTGTTTCCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGGATCCCCTCCTTG 371742
Query 134619 TCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATG 134678
||||| || || ||||| || | ||||| | || || ||||| || |||
Sbjct 371743 TCTTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATG 371802
Query 134679 GTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || ||||| | || || ||||| || |||||
Sbjct 371803 GTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 371837
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 504264323895280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |