Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galeopterus_20variegatus_20[refseq_20GCF_5F000696425.1_202014-06-05] 179,514 sequences; 3,187,660,572 total letters Query= NC_028238.1 Length=188534 Score E Sequences producing significant alignments: (Bits) Value seq671 104 3e-17 >seq671 Length=569411 Score = 104 bits (114), Expect = 3e-17 Identities = 143/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 22635 ACTTCTCTTATTTCTGGATGCGCTATTTTTTCAAATATAAGTTGTGCTACTCTATCGCCC 22694 |||||| ||||||||||| || |||| | ||||| ||||| | || ||| ||| Sbjct 254498 ACTTCTTCTATTTCTGGATAAAAAATCCATTCACAAATAAGCTGTGCAATTCGATCACCC 254439 Query 22695 TTATTTACGTAAAATACATCCTTACTAAAATTAAATAACAATATACCTATATTTCCCCTG 22754 || || || | ||| | || || | ||||||||| | | | ||| | |||||| ||| Sbjct 254438 TTTTTGACTTCAAACATTTCTTTGCCAAAATTAAACAGTACAACACCAACATTTCCTCTG 254379 Query 22755 TAATCTCTATCTATCACACCCGCGCCTACATCGATAAAATGATTACATGCCAATCCCGAT 22814 |||||| |||||| ||||| || |||||||| || || || || ||||| || || Sbjct 254378 TAATCTTCATCTATGACACCAGCTCCTACATCTATGAAGTGTTTGGCAGCCAAGCCAGAA 254319 Query 22815 CTAGGAGATATTCTTCCATA 22834 | |||| || |||||| || Sbjct 254318 CATGGAGCTACTCTTCCGTA 254299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 601827307523360