Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Galeopterus_20variegatus_20[refseq_20GCF_5F000696425.1_202014-06-05]
179,514 sequences; 3,187,660,572 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq8862 264 1e-65
seq12448 176 4e-39
seq40139 167 2e-36
seq17702 167 2e-36
seq131279 149 6e-31
>seq8862
Length=84653
Score = 264 bits (292), Expect = 1e-65
Identities = 288/381 (76%), Gaps = 1/381 (0%)
Strand=Plus/Plus
Query 6487 TCGAATAATTTTGAGCTGGGGGAACGGTCGGGGCTCTCGTTGCAGCTGGATCCGGAGCCG 6546
||||| |||||||||| ||||| |||| || ||||| || ||||| || |||||
Sbjct 48701 TCGAAGGATTTTGAGCTTCGGGAAAGGTCCTGGTTCTCGCTGAAGCTGAATTTTCAGCCG 48760
Query 6547 CTCGATGTGGTTCAGGTAGATATGCGCATCCCCCAACGTATGCACCAGCTCCCCAGGAAC 6606
||| ||||| ||||||| ||||| ||||| ||||| |||| || | || || ||
Sbjct 48761 CTCAATGTGAGTCAGGTAAATATGTGCATCTCCCAAATTATGTACAAAGTCACCTGGCTG 48820
Query 6607 CAACCCCACGACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGG 6666
|| ||| || || |||||||||||||||||||| || || || | |||||||| ||
Sbjct 48821 CAGGCCCGTGAG-TGCGCGATCATGTACGTGAGCAGTGCATAGCTGGTGATGTTGAAAGG 48879
Query 6667 CACCCCTAACCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGC 6726
||| || | ||||||||||| || | || | ||||||||||||||||| || ||| |
Sbjct 48880 CACGCCCAGGCCCATGTCTCCTGACCTCTGGTGCAGCTGGCAGGACAGCTCACCGTTCAC 48939
Query 6727 GACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGG 6786
| ||||| |||||||||| || ||||| || |||||||||||||||||||| || ||
Sbjct 48940 TATGTAGAGCTGGCAGAGGGCATGACACGGAGGCAGCGCCATCAGAGGGAGATCTTTTGG 48999
Query 6787 GTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCAC 6846
||||| || |||| | ||| |||||||| || || || || | |||||| |||||
Sbjct 49000 ATTCCAAGCATACATGATGATTCTTCTGTCGTCTGGATTGGTTTTGATGGTGTCAATCAC 49059
Query 6847 GTACTGCAGCTGGTCCGCTCC 6867
| ||||||||||| ||||
Sbjct 49060 TTTTTGCAGCTGGTCTACTCC 49080
Score = 264 bits (292), Expect = 1e-65
Identities = 288/381 (76%), Gaps = 1/381 (0%)
Strand=Plus/Minus
Query 34478 GGAGCGGACCAGCTGCAGTACGTGATCGACACCTTGAAGCGGAACCCTGATGACAGAAGG 34537
|||| ||||||||||| | ||||| |||||| | || || || || ||||||||
Sbjct 49080 GGAGTAGACCAGCTGCAAAAAGTGATTGACACCATCAAAACCAATCCAGACGACAGAAGA 49021
Query 34538 ATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCAC 34597
||| | |||| || ||||| || || |||||||||||||||||||| || ||||| ||
Sbjct 49020 ATCATCATGTATGCTTGGAATCCAAAAGATCTCCCTCTGATGGCGCTGCCTCCGTGTCAT 48961
Query 34598 ACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCTGTCCTGCCAGCTCTATCAACGATCG 34657
|||||||||| ||||| | | ||| || ||||||||||||||||| | || | ||
Sbjct 48960 GCCCTCTGCCAGCTCTACATAGTGAACGGTGAGCTGTCCTGCCAGCTGCACCAGAGGTCA 48901
Query 34658 GGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATG 34717
||||||||||| | || ||||| |||||||| | || || || |||||||||||||||
Sbjct 48900 GGAGACATGGGCCTGGGCGTGCCTTTCAACATCACCAGCTATGCACTGCTCACGTACATG 48841
Query 34718 ATCGCTCATGTCGTGGGGTTGGTTCCTGGGGAGCTGGTGCATACGTTGGGGGATGCGCAT 34777
||||| || || ||| || || || || | || |||| ||||| ||||| |||
Sbjct 48840 ATCGCGCA-CTCACGGGCCTGCAGCCAGGTGACTTTGTACATAATTTGGGAGATGCACAT 48782
Query 34778 ATCTACCTGAACCACATCGAGCGGCTCCGGATCCAGCTGCAACGAGAGCCCCGACCGTTC 34837
|| ||||||| ||||| |||||||| || ||||| || ||||| || |||| |||
Sbjct 48781 ATTTACCTGACTCACATTGAGCGGCTGAAAATTCAGCTTCAGCGAGAACCAGGACCTTTC 48722
Query 34838 CCCCAGCTCAAAATTATTCGA 34858
|| |||||||||| |||||
Sbjct 48721 CCGAAGCTCAAAATCCTTCGA 48701
>seq12448
Length=43075
Score = 176 bits (194), Expect = 4e-39
Identities = 138/165 (84%), Gaps = 0/165 (0%)
Strand=Plus/Plus
Query 6616 GACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAA 6675
||| || ||||||||||||||||| || || || || || |||||||| ||||| || |
Sbjct 9239 GACGTGCGCGATCATGTACGTGAGAAGCGCATAGCTGGCGATGTTGAAAGGCACGCCGAG 9298
Query 6676 CCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAA 6735
||||||||||| || | || || ||||||||||||||||| |||||| | ||||||||
Sbjct 9299 GCCCATGTCTCCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCATTCACCACGTAGAA 9358
Query 6736 TTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATC 6780
||||||||||| |||||||| || ||| ||||||||||||||||
Sbjct 9359 TTGGCAGAGGGCATGGCACGGAGGCAGCACCATCAGAGGGAGATC 9403
Score = 176 bits (194), Expect = 4e-39
Identities = 138/165 (84%), Gaps = 0/165 (0%)
Strand=Plus/Minus
Query 34565 GATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAAT 34624
|||||||||||||||| ||| || |||||||| ||||||||||||||||||| | ||||
Sbjct 9403 GATCTCCCTCTGATGGTGCTGCCTCCGTGCCATGCCCTCTGCCAATTCTACGTGGTGAAT 9344
Query 34625 GGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTC 34684
|| ||||||||||||||||| || || | || ||||||||||| | || ||||| |||
Sbjct 9343 GGTGAGCTGTCCTGCCAGCTGTACCAGAGGTCAGGAGACATGGGCCTCGGCGTGCCTTTC 9284
Query 34685 AACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCATGTC 34729
||||| || || || || || ||||||||||||||||| || |||
Sbjct 9283 AACATCGCCAGCTATGCGCTTCTCACGTACATGATCGCGCACGTC 9239
Score = 105 bits (116), Expect = 6e-18
Identities = 118/155 (76%), Gaps = 2/155 (1%)
Strand=Plus/Plus
Query 6899 TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCC 6958
|| || |||||||| || ||||||||||| || || || ||||| | ||| |||| || |
Sbjct 12956 TATTCTGCCCCAAAATGCCTCCACTGGAAGCCATAAACTGGGCCGAGGTC-CCCTTCTAC 13014
Query 6959 CGAGATGG-GAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTT 7017
| ||| ||| ||| | |||||||||||||||| || |||| || |||||||||||
Sbjct 13015 TCTGGTGGAGAATCCCAGGCTGTCCAGAAAGTCTCGGGAACCGTTGGCATCCCAGATCTT 13074
Query 7018 CACCCCCCGGGACGAGAGCTCCTTGGTGTTCGTGG 7052
||| ||| ||| ||||| || || | || ||||
Sbjct 13075 CACTCCCTTGGAAGAGAGTTCTTTAGCATTTGTGG 13109
Score = 105 bits (116), Expect = 6e-18
Identities = 118/155 (76%), Gaps = 2/155 (1%)
Strand=Plus/Minus
Query 34293 CCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCTCACGGGTCTC 34352
|||| || | || || ||||| ||| ||| |||||||||||||| || |||| || |
Sbjct 13109 CCACAAATGCTAAAGAACTCTCTTCCAAGGGAGTGAAGATCTGGGATGCCAACGGTTCCC 13050
Query 34353 GAGACTTTCTGGACAAGCGGGGGTTC-CCATCTCGGGAGGAGGGCGACTTGGGCCCGGTC 34411
||||||||||||||| | ||| ||| ||| | | || |||| ||| | ||||| ||
Sbjct 13049 GAGACTTTCTGGACAGCCTGGGATTCTCCACCAGAGTAGAAGGG-GACCTCGGCCCAGTT 12991
Query 34412 TACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTA 34446
|| || ||||||||||| || |||||||| || ||
Sbjct 12990 TATGGCTTCCAGTGGAGGCATTTTGGGGCAGAATA 12956
>seq40139
Length=6180
Score = 167 bits (184), Expect = 2e-36
Identities = 136/165 (82%), Gaps = 0/165 (0%)
Strand=Plus/Plus
Query 34565 GATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAAT 34624
|||||||||||||||| ||| || |||||||| |||||||||| |||||||| | |||
Sbjct 836 GATCTCCCTCTGATGGTGCTGCCTCCGTGCCATGCCCTCTGCCAGTTCTACGTGGTGAAC 895
Query 34625 GGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTC 34684
|| ||||||||||||||||| || || | || ||||||||||| | || ||||| |||
Sbjct 896 GGTGAGCTGTCCTGCCAGCTGTACCAGAGGTCAGGAGACATGGGCCTCGGCGTGCCTTTC 955
Query 34685 AACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCATGTC 34729
||||| || || || || || ||||||||||||||||| || |||
Sbjct 956 AACATCGCCAGCTATGCGCTTCTCACGTACATGATCGCGCACGTC 1000
Score = 167 bits (184), Expect = 2e-36
Identities = 136/165 (82%), Gaps = 0/165 (0%)
Strand=Plus/Minus
Query 6616 GACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAA 6675
||| || ||||||||||||||||| || || || || || |||||||| ||||| || |
Sbjct 1000 GACGTGCGCGATCATGTACGTGAGAAGCGCATAGCTGGCGATGTTGAAAGGCACGCCGAG 941
Query 6676 CCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAA 6735
||||||||||| || | || || ||||||||||||||||| || ||| | ||||||||
Sbjct 940 GCCCATGTCTCCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCGTTCACCACGTAGAA 881
Query 6736 TTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATC 6780
|||||||||| |||||||| || ||| ||||||||||||||||
Sbjct 880 CTGGCAGAGGGCATGGCACGGAGGCAGCACCATCAGAGGGAGATC 836
>seq17702
Length=18075
Score = 167 bits (184), Expect = 2e-36
Identities = 136/165 (82%), Gaps = 0/165 (0%)
Strand=Plus/Plus
Query 34565 GATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAAT 34624
|||||||||||||||| ||| || |||||||| |||||||||| |||||||| | |||
Sbjct 13080 GATCTCCCTCTGATGGTGCTGCCTCCGTGCCATGCCCTCTGCCAGTTCTACGTGGTGAAC 13139
Query 34625 GGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTC 34684
|| ||||||||||||||||| || || | || ||||||||||| | || ||||| |||
Sbjct 13140 GGTGAGCTGTCCTGCCAGCTGTACCAGAGGTCAGGAGACATGGGCCTCGGCGTGCCTTTC 13199
Query 34685 AACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCATGTC 34729
||||| || || || || || ||||||||||||||||| || |||
Sbjct 13200 AACATCGCCAGCTATGCGCTTCTCACGTACATGATCGCGCACGTC 13244
Score = 167 bits (184), Expect = 2e-36
Identities = 136/165 (82%), Gaps = 0/165 (0%)
Strand=Plus/Minus
Query 6616 GACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAA 6675
||| || ||||||||||||||||| || || || || || |||||||| ||||| || |
Sbjct 13244 GACGTGCGCGATCATGTACGTGAGAAGCGCATAGCTGGCGATGTTGAAAGGCACGCCGAG 13185
Query 6676 CCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAA 6735
||||||||||| || | || || ||||||||||||||||| || ||| | ||||||||
Sbjct 13184 GCCCATGTCTCCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCGTTCACCACGTAGAA 13125
Query 6736 TTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATC 6780
|||||||||| |||||||| || ||| ||||||||||||||||
Sbjct 13124 CTGGCAGAGGGCATGGCACGGAGGCAGCACCATCAGAGGGAGATC 13080
Score = 105 bits (116), Expect = 6e-18
Identities = 118/155 (76%), Gaps = 2/155 (1%)
Strand=Plus/Plus
Query 34293 CCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCTCACGGGTCTC 34352
|||| || | || || ||||| ||| ||| |||||||||||||| || |||| || |
Sbjct 9466 CCACAAATGCTAAAGAACTCTCTTCCAAGGGAGTGAAGATCTGGGATGCCAACGGTTCCC 9525
Query 34353 GAGACTTTCTGGACAAGCGGGGGTTC-CCATCTCGGGAGGAGGGCGACTTGGGCCCGGTC 34411
||||||||||||||| | ||| ||| ||| | | || |||| ||| | ||||| ||
Sbjct 9526 GAGACTTTCTGGACAGCCTGGGATTCTCCACCAGAGTAGAAGGG-GACCTCGGCCCAGTT 9584
Query 34412 TACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTA 34446
|| || ||||||||||| || |||||||| || ||
Sbjct 9585 TATGGCTTCCAGTGGAGGCATTTTGGGGCAGAATA 9619
Score = 105 bits (116), Expect = 6e-18
Identities = 118/155 (76%), Gaps = 2/155 (1%)
Strand=Plus/Minus
Query 6899 TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCC 6958
|| || |||||||| || ||||||||||| || || || ||||| | ||| |||| || |
Sbjct 9619 TATTCTGCCCCAAAATGCCTCCACTGGAAGCCATAAACTGGGCCGAGGTC-CCCTTCTAC 9561
Query 6959 CGAGATGG-GAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTT 7017
| ||| ||| ||| | |||||||||||||||| || |||| || |||||||||||
Sbjct 9560 TCTGGTGGAGAATCCCAGGCTGTCCAGAAAGTCTCGGGAACCGTTGGCATCCCAGATCTT 9501
Query 7018 CACCCCCCGGGACGAGAGCTCCTTGGTGTTCGTGG 7052
||| ||| ||| ||||| || || | || ||||
Sbjct 9500 CACTCCCTTGGAAGAGAGTTCTTTAGCATTTGTGG 9466
>seq131279
Length=636
Score = 149 bits (164), Expect = 6e-31
Identities = 222/314 (71%), Gaps = 1/314 (0%)
Strand=Plus/Plus
Query 6938 GGGCCCAAGTCGCCCTCCTCCCGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGAC 6997
||||| | ||| || || || | | | ||| ||| | |||||| ||||||||||||
Sbjct 1 GGGCCAAGGTCCCCTTCTTCTCTGGTGGAGAATCCCAGGCTGTCCAAAAAGTCTCGAGAA 60
Query 6998 CCGTGAGCGTCCCAGATCTTCACCCCCCGGGACGAGAGCTCCTTGGTGTTCGTGGCCCCC 7057
|||| || |||||||||||||| ||| ||| ||||||| || ||||| |||| |
Sbjct 61 CCGTTGGCATCCCAGATCTTCACTCCCTTGGAAGAGAGCTTTTTCGTGTTTGTGGATCTT 120
Query 7058 CTCACGAACCACAGCAGCTCCTCGACCACGCCCTTCCAGTACACACGTTTCGTCGTCAGC 7117
| | |||||||||||||| | | | ||||||||| ||||| ||| || ||||||
Sbjct 121 TTGATAAACCACAGCAGCTCTTTCAAAATACCCTTCCAGAACACAGCTTTGGTTGTCAGC 180
Query 7118 AGCGGAAATTCGCCCCGAAGGTTGTATCGGGCCTGTGTGCCGAACACGGAGAGGGTCCCC 7177
|| ||||||| | | ||| |||| | ||||| || |||||| || ||||| |||
Sbjct 181 AGGTGAAATTCATCTCTGAGGCTGTAGTGCGCCTGCAGGCAGAACACCGACAGGGTGCCC 240
Query 7178 GTCCCGGTCCGGTCCCCCTTCCGGTAGCCCTCCCTGAGGATCCGCGCCACCTGATACAGA 7237
|| || || ||| ||| ||| | ||| | ||| | || ||||||| |||
Sbjct 241 GTGCCCGTGTGGTGTCCC-TCCTGAAGCTGCAGCGCAGGGTGTGCTCCACCTGCCCCAGG 299
Query 7238 TACTGCCACTCCCC 7251
| ||||| ||||||
Sbjct 300 TGCTGCCGCTCCCC 313
Score = 149 bits (164), Expect = 6e-31
Identities = 222/314 (71%), Gaps = 1/314 (0%)
Strand=Plus/Minus
Query 34094 GGGGAGTGGCAGTATCTGTATCAGGTGGCGCGGATCCTCAGGGAGGGCTACCGGAAGGGG 34153
|||||| ||||| | ||| ||||||| || | ||| | ||| | ||| |||
Sbjct 313 GGGGAGCGGCAGCACCTGGGGCAGGTGGAGCACACCCTGCGCTGCAGCTTCAGGA-GGGA 255
Query 34154 GACCGGACCGGGACGGGGACCCTCTCCGTGTTCGGCACACAGGCCCGATACAACCTTCGG 34213
||| || || ||||| ||||| || |||||| || ||||| | |||| ||| |
Sbjct 254 CACCACACGGGCACGGGCACCCTGTCGGTGTTCTGCCTGCAGGCGCACTACAGCCTCAGA 195
Query 34214 GGCGAATTTCCGCTGCTGACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGAGGAGCTG 34273
| ||||||| |||||||| || ||| ||||| ||||||||| | | | ||||||
Sbjct 194 GATGAATTTCACCTGCTGACAACCAAAGCTGTGTTCTGGAAGGGTATTTTGAAAGAGCTG 135
Query 34274 CTGTGGTTCGTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATC 34333
|||||||| | | | |||| ||||| || ||||||| ||| ||| |||||||||
Sbjct 134 CTGTGGTTTATCAAAAGATCCACAAACACGAAAAAGCTCTCTTCCAAGGGAGTGAAGATC 75
Query 34334 TGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCATCTCGGGAGGAG 34393
||||| || |||| |||||||||||| |||||| | ||| ||| | | | || ||
Sbjct 74 TGGGATGCCAACGGTTCTCGAGACTTTTTGGACAGCCTGGGATTCTCCACCAGAGAAGAA 15
Query 34394 GGCGACTTGGGCCC 34407
|| ||| | |||||
Sbjct 14 GGGGACCTTGGCCC 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 447256532794080
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