Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Galeopterus_20variegatus_20[refseq_20GCF_5F000696425.1_202014-06-05]
179,514 sequences; 3,187,660,572 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq633 127 5e-24
seq1029 125 2e-23
seq50868 86.0 1e-11
seq19457 86.0 1e-11
seq5167 84.2 5e-11
>seq633
Length=582679
Score = 127 bits (140), Expect = 5e-24
Identities = 165/227 (73%), Gaps = 6/227 (3%)
Strand=Plus/Plus
Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943
||||| | ||| || || || | || |||||||| |||||||||||||| | | |||
Sbjct 204326 CTGAGACGGAGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTG 204385
Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
| |||||||| || || || || ||||| |||||||||||||| | | ||| |||
Sbjct 204386 CGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCT 204445
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCA 152060
|| || || || || || || ||| |||| | | |||| ||| ||| |||||
Sbjct 204446 TCTTTATCCTGGATCTTGGCCTTCACATTCTCGATGGTGTC---ACTGGGCTCCACTTCC 204502
Query 152061 AGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
|| || || || ||||| || |||||||||||||| | ||||||||
Sbjct 204503 AGGGTGATGGTCTTGCCGGTCAGAGTCTTCACGAAAATTTGCATTTT 204549
Score = 114 bits (126), Expect = 3e-20
Identities = 146/200 (73%), Gaps = 6/200 (3%)
Strand=Plus/Plus
Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCG 151967
|| |||||||| ||||||||||| || | | ||| | |||||||| || || ||
Sbjct 204122 GTGGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCT 204181
Query 151968 GCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTG 152027
|| ||||| |||||||||||||| | | ||| ||||| || || || || || ||
Sbjct 204182 GCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCTTTATCCTGGATCTTGGCCTTC 204241
Query 152028 ACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGA 152084
||| |||| | | |||| ||| ||| ||||| || || || || ||||| || ||
Sbjct 204242 ACATTCTCGATGGTGTC---ACTGGGCTCCACTTCCAGGGTGATGGTCTTGCCGGTCAGG 204298
Query 152085 GTCTTCACGAAGACCTGCAT 152104
||||||||||||| ||||||
Sbjct 204299 GTCTTCACGAAGATCTGCAT 204318
Score = 87.8 bits (96), Expect = 4e-12
Identities = 84/108 (78%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942
||| || | |||||| ||||| || || |||||||| |||||||||||||| | | |||
Sbjct 202796 CCTCAGACGGAGGACCAGATGGAGGGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGT 202855
Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTC 151990
| |||||||| || || || || ||||| ||||||||||||||
Sbjct 202856 GCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTC 202903
>seq1029
Length=469353
Score = 125 bits (138), Expect = 2e-23
Identities = 163/224 (73%), Gaps = 6/224 (3%)
Strand=Plus/Plus
Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943
||||| | ||| || || || | || |||||||| ||||||||||| || | | ||
Sbjct 371845 CTGAGACGGAGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTG 371904
Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
| |||||||| || |||||| |||||||| | |||||||||||| | | ||| ||
Sbjct 371905 CGACCATCTTCCAGCTGTTTCCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGGATCCCC 371964
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCA 152060
||||| ||||| || || ||||| |||| | | |||| ||| ||| || ||
Sbjct 371965 TCCTTGTCTTGGATCTTGGCCTTGACGTTCTCAATGGTGTC---ACTGGGCTCGACCTCG 372021
Query 152061 AGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || || ||||| || || ||||||||||||| ||||||
Sbjct 372022 AGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 372065
Score = 125 bits (138), Expect = 2e-23
Identities = 163/224 (73%), Gaps = 6/224 (3%)
Strand=Plus/Plus
Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943
||||| | ||| || || || | || |||||||| ||||||||||| || | | ||
Sbjct 372073 CTGAGACGGAGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTG 372132
Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
| |||||||| || |||||| |||||||| | |||||||||||| | | ||| ||
Sbjct 372133 CGACCATCTTCCAGCTGTTTCCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGGATGCCC 372192
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCA 152060
||||| ||||| || || ||||| |||| | | |||| ||| ||| || ||
Sbjct 372193 TCCTTGTCTTGGATCTTGGCCTTGACGTTCTCAATGGTGTC---ACTGGGCTCGACCTCG 372249
Query 152061 AGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || || ||||| || || ||||||||||||| ||||||
Sbjct 372250 AGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 372293
Score = 125 bits (138), Expect = 2e-23
Identities = 163/224 (73%), Gaps = 6/224 (3%)
Strand=Plus/Plus
Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943
||||| | ||| || || || | || |||||||| ||||||||||| || | | ||
Sbjct 372301 CTGAGACGGAGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTG 372360
Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
| |||||||| || |||||| |||||||| | |||||||||||| | | ||| ||
Sbjct 372361 CGACCATCTTCCAGCTGTTTCCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGGATGCCC 372420
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCA 152060
||||| ||||| || || ||||| |||| | | |||| ||| ||| || ||
Sbjct 372421 TCCTTGTCTTGGATCTTGGCCTTGACGTTCTCAATGGTGTC---ACTGGGCTCGACCTCG 372477
Query 152061 AGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || || ||||| || || ||||||||||||| ||||||
Sbjct 372478 AGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 372521
Score = 125 bits (138), Expect = 2e-23
Identities = 163/224 (73%), Gaps = 6/224 (3%)
Strand=Plus/Plus
Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943
||||| | ||| || || || | || |||||||| ||||||||||| || | | ||
Sbjct 372529 CTGAGACGGAGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTG 372588
Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
| |||||||| || |||||| |||||||| | |||||||||||| | | ||| ||
Sbjct 372589 CGACCATCTTCCAGCTGTTTCCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGGATGCCC 372648
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCA 152060
||||| ||||| || || ||||| |||| | | |||| ||| ||| || ||
Sbjct 372649 TCCTTGTCTTGGATCTTGGCCTTGACGTTCTCAATGGTGTC---ACTGGGCTCGACCTCG 372705
Query 152061 AGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || || ||||| || || ||||||||||||| ||||||
Sbjct 372706 AGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 372749
Score = 123 bits (136), Expect = 6e-23
Identities = 163/225 (72%), Gaps = 6/225 (3%)
Strand=Plus/Plus
Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943
||||| | ||| || || || | || |||||||| ||||||||||| || | | ||
Sbjct 372757 CTGAGACGGAGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTG 372816
Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
| |||||||| || |||||| |||||||| | |||||||||||| | | ||| ||
Sbjct 372817 CGACCATCTTCCAGCTGTTTCCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGGATGCCC 372876
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCA 152060
||||| ||||| || || ||||| |||| | | |||| ||| ||| || ||
Sbjct 372877 TCCTTGTCTTGGATCTTGGCCTTGACGTTCTCGATGGTGTC---ACTGGGCTCGACCTCG 372933
Query 152061 AGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105
|| || || || ||||| || || |||||||| |||| |||||||
Sbjct 372934 AGGGTGATGGTCTTGCCGGTCAGGGTCTTCACAAAGATCTGCATT 372978
Score = 118 bits (130), Expect = 2e-21
Identities = 156/215 (73%), Gaps = 6/215 (3%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
||||| | || ||||| |||||||| || |||||||| || | | || | ||||||
Sbjct 371626 AGGACCAAGTGCAGAGTGGACTCTTTCTGAATGTTGTAGTCAGACAGGGTGCGTCCATCT 371685
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || |||||| || ||||| | |||||||||||| | | ||| || ||||| |||
Sbjct 371686 TCCAGCTGTTTCCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGGATCCCCTCCTTGTCT 371745
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069
|| || || ||||| |||| | | |||| ||| ||| || || || || ||
Sbjct 371746 TGGATCTTGGCCTTGACGTTCTCAATGGTGTC---ACTGGGCTCGACCTCGAGGGTGATG 371802
Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| ||||| || || ||||||||||||| ||||||
Sbjct 371803 GTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 371837
>seq50868
Length=3469
Score = 86.0 bits (94), Expect = 1e-11
Identities = 145/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 151898 AAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAG 151957
|| ||||||||| ||||| || || ||||| || || | ||||| | |||||||| ||
Sbjct 2102 AACATGAAGAGTTGACTCCTTCTGAATGTTATAGTCAGACAAAGTACATCCATCTTCGAG 2043
Query 151958 GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAAT 152017
| || || || ||||| || || ||||| || | | ||||||||||| || || ||
Sbjct 2042 GTGCTTACCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGAT 1983
Query 152018 TTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCC 152077
|| || ||| | |||| | ||||| || |||||||| ||||| | ||
Sbjct 1982 CTTAGCCTTTACATTTTCTATTGTATCTGAGGGTTCAGACTCAAGAGTGATAGTCCTCCC 1923
Query 152078 CGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
| | || || || | ||| | |||||| ||
Sbjct 1922 CATAAGGGTTTTTATGAAAATCTGCATCTT 1893
>seq19457
Length=14611
Score = 86.0 bits (94), Expect = 1e-11
Identities = 145/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 151898 AAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAG 151957
|| ||||||||| ||||| || || ||||| || || | ||||| | |||||||| ||
Sbjct 1945 AACATGAAGAGTTGACTCCTTCTGAATGTTATAGTCAGACAAAGTACATCCATCTTCGAG 2004
Query 151958 GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAAT 152017
| || || || ||||| || || ||||| || | | ||||||||||| || || ||
Sbjct 2005 GTGCTTACCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGAT 2064
Query 152018 TTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCC 152077
|| || ||| | |||| | ||||| || |||||||| ||||| | ||
Sbjct 2065 CTTAGCCTTTACATTTTCTATTGTATCTGAGGGTTCAGACTCAAGAGTGATAGTCCTCCC 2124
Query 152078 CGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
| | || || || | ||| | |||||| ||
Sbjct 2125 CATAAGGGTTTTTATGAAAATCTGCATCTT 2154
>seq5167
Length=254018
Score = 84.2 bits (92), Expect = 5e-11
Identities = 151/221 (68%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946
||||| | |||||||||||| | ||||| || || ||||| || || | ||||| |
Sbjct 220497 AGTCTAAACACAAGATGAAGATTTGACTCCTTCTGAATGTTATAGTCAGACAAAGTACGT 220556
Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006
|||||||| || || || || |||| || || ||||| || | | |||||||||
Sbjct 220557 CCATCTTCCAGTTGCTTACCAGCAGAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCC 220616
Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066
|| || || || || || ||| | |||| | || | || || ||||||||
Sbjct 220617 TTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCAAGGGTTCAACCTCAAGAGTG 220676
Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
|| || || ||| | | || || ||||| | |||||| ||
Sbjct 220677 ATGGTCTTCCCCATAAAGGTTTTTACGAAAATCTGCATCTT 220717
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151166985477894
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