Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Galeopterus_20variegatus_20[refseq_20GCF_5F000696425.1_202014-06-05]
179,514 sequences; 3,187,660,572 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq260 156 4e-33
seq1401 120 3e-22
seq80406 91.5 2e-13
>seq260
Length=805401
Score = 156 bits (172), Expect = 4e-33
Identities = 374/562 (67%), Gaps = 9/562 (2%)
Strand=Plus/Plus
Query 23509 CATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAAT 23568
|| ||| | ||||| || | ||| ||||| || | || | |||||| ||||| || |
Sbjct 242870 CAGGCACAGTCACAGTGCAAGCCCTCATCTCTGC--ATAAGTTCATTGGAAAAAGTGAGG 242927
Query 23569 CCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAA 23628
|| |||| | ||||| ||| || | ||| ||||||| ||| | || || ||||||||
Sbjct 242928 CCAGGCACCAGTCCTCATTTCTTGAGCCAGAATATTGATGCAGAAGAACCAGAAAAGAAG 242987
Query 23629 ATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAA 23688
|| | || || || ||| ||| |||| || | || | || || | | || |
Sbjct 242988 ATTGCTTCCACTGCAGCAGAGGTTACAATACATTCTACATAGGTAGCCTCTTTGTCCCCA 243047
Query 23689 ATCCAtttttttGTCCAATTAGC---CTTCAATTTTACACACTCAATTGTTTCAATTGCT 23745
||||| | | ||||| || |||| || | ||| | || ||||||| ||
Sbjct 243048 ATCCAGTGCAAGGACCAATCTGCTGCCTTC---TTGAAACAAGCCATCATTTCAATGGCA 243104
Query 23746 TTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATAC 23805
|| |||||||| |||||| || | | || || ||||||| || |||||||
Sbjct 243105 TTGAAGAGAAATTCCCTTTCTTTGGAATTT-TAATGTAAATATCAATAAGGCAACTATAG 243163
Query 23806 ATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGAC 23865
||||||||||| | ||||| || ||||| || || ||||| ||||| | ||||| |
Sbjct 243164 ATTTCAGAATGTGTGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGCAGGCTTCTGTA 243223
Query 23866 AATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCA 23925
| ||| | | ||||| || | ||||||| || || || |||||||| |
Sbjct 243224 ATCTGACTTTTCTGGCTAAATCGCTTCACCAAATTTTTATTTACTATGCCATCACTCACT 243283
Query 23926 GCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGATAATTTTTTCCAA 23985
||||||||||| |||||||| | |||||| ||| || |||| | || || |||
Sbjct 243284 GCAAAGAAAGCCAGAACATAGGATGTAAAATATCTCTCCTCAGGTTTCAAGCCTTCCCAG 243343
Query 23986 TCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTTGCCAAGGCACGC 24045
| | | | || || | | ||| || | || ||| |||||| || ||| |
Sbjct 243344 TGCTGAGTGTCCTTGTAAAGATCCACCACCTCGGCTGACCAAAAGGAAGCTTCGGCTTTC 243403
Query 24046 TTATACATTAGCCAAATATCAT 24067
||||||||| ||||||||||||
Sbjct 243404 TTATACATTTGCCAAATATCAT 243425
>seq1401
Length=405806
Score = 120 bits (132), Expect = 3e-22
Identities = 102/126 (81%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 23531 CTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTT 23590
||||||| || || || | |||||| ||||| || | ||||||||| | ||||| || |
Sbjct 92090 CTTCATCTCTGCTGATGAGTTCATTGGAAAAAGTGAGTCCTGGCATAAGTCCTCTCTTCT 92149
Query 23591 TAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGG 23650
| | ||| ||||| |||||||| ||||| || |||||||| || |||||||| |||||||
Sbjct 92150 TTAGCCAGAATATAGCAGCAAAAGATCCCGAGAAGAAAATTCCTTCAACAGCAGCAAAGG 92209
Query 23651 CCACAA 23656
||||||
Sbjct 92210 CCACAA 92215
>seq80406
Length=1056
Score = 91.5 bits (100), Expect = 2e-13
Identities = 80/100 (80%), Gaps = 0/100 (0%)
Strand=Plus/Minus
Query 23762 TTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATAT 23821
|||||| | |||| | || || |||||||| || | |||||||||||||||||| || |
Sbjct 853 TTTCTTTAGAATCTTTAATGTAAGTATCAATAAGGAGACTATACATTTCAGAATGTATGT 794
Query 23822 TTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTC 23861
|||| || ||||| || || ||||| ||||| | ||||||
Sbjct 793 TTTCCATGGCAATTTGGAAGCCATAGAAACAGCGAGCTTC 754
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 520317820039600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |