Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Galeopterus_20variegatus_20[refseq_20GCF_5F000696425.1_202014-06-05]
179,514 sequences; 3,187,660,572 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq633 111 1e-19
seq1029 104 2e-17
>seq633
Length=582679
Score = 111 bits (122), Expect = 1e-19
Identities = 157/221 (71%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704
||||| | |||||| |||| ||| ||| ||||| ||||| || || || || |||||
Sbjct 204329 AGACGGAGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGG 204388
Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764
| || || ||||||||||| || || || || | ||| ||||| | ||| | || ||
Sbjct 204389 CCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCT 204448
Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTT 41824
|| ||| ||| || ||||| | | ||||| || | |||||| |||| ||
Sbjct 204449 TTATCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCCACTTCCAGGGTG 204508
Query 41825 ATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865
|| || || || ||||| ||||| |||||||| ||||| ||
Sbjct 204509 ATGGTCTTGCCGGTCAGAGTCTTCACGAAAATTTGCATTTT 204549
Score = 98.7 bits (108), Expect = 9e-16
Identities = 137/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730
||| ||||| ||||| ||||| || || ||||| | || || ||||||||||| || ||
Sbjct 204127 CTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAA 204186
Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGA 41790
|| || | ||| ||||| | ||| | || || || ||| ||| || |||||
Sbjct 204187 GATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCTTTATCCTGGATCTTGGCCTTCACATT 204246
Query 41791 CGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850
| | ||||| || | |||||| |||| || || || || || ||||| ||||| ||
Sbjct 204247 CTCGATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 204306
Query 41851 GAAAATCTGCAT 41862
||| ||||||||
Sbjct 204307 GAAGATCTGCAT 204318
>seq1029
Length=469353
Score = 104 bits (114), Expect = 2e-17
Identities = 152/213 (71%), Gaps = 8/213 (4%)
Strand=Plus/Plus
Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713
|||| ||||| ||| ||| ||||||||||| ||||| || |||||||| | || ||
Sbjct 371629 ACCAAGTGCAGAGTGGACTCTTTCTGAATGTTGTAGTCAGACAGGGTGCGTCCATCTTCC 371688
Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773
||||| || || || || |||| | ||| ||||| | ||| | | ||||||||| |
Sbjct 371689 AGCTGTTTCCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGGATCCCCTCCTTGTCTTGG 371748
Query 41774 ATTTTTTGCTTCAACGACG-ACACA---GTGTCGCTCGACTCCACCTCCACCGTTATCGT 41829
|| || ||| |||| | || ||||| || | ||| ||||| | || || ||
Sbjct 371749 ATCTTGGCCTT----GACGTTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGT 371804
Query 41830 TTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| || ||||| ||||| ||||| ||||||||
Sbjct 371805 CTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 371837
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 461266624496800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |