Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gorilla_20gorilla_20gorilla_20[refseq_20GCF_5F000151905.2_202014-12-
19] 40,711 sequences; 3,063,362,794 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq931 262 4e-65
seq39 105 7e-18
>seq931
Length=156331669
Score = 262 bits (290), Expect = 4e-65
Identities = 520/764 (68%), Gaps = 7/764 (1%)
Strand=Plus/Plus
Query 16778 CCCAGTTCGGCGATTAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAG 16837
|||||||| || | ||| || || ||||| || || ||||| ||||| |||
Sbjct 44830123 CCCAGTTCCAGCATAAGTCTGTCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAA 44830182
Query 16838 TTCATTCCTATAAGACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACC 16897
||||| || || || || || | || || || | ||| ||| ||||| |||
Sbjct 44830183 TTCATCCCAATGAGCTTCACAGGCAAGGCCTCGGTGAGGAATTCTTGTTCTATCTGAACA 44830242
Query 16898 GCTTCCTTAATAATA-CTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAA 16956
|| | |||| || || || || ||||| || ||| | ||| || ||||| ||
Sbjct 44830243 GCATTGATAATTATTTCTCTCA-CTTTCTCCTCCGATGGTTTGTGTACCAGGTGTTTGAA 44830301
Query 16957 CATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAA 17016
||||| || || ||||| || ||||| ||||| |||||||| |||||||| || |||||
Sbjct 44830302 CATCAAGCAAGCAAAATCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAA 44830361
Query 17017 TGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGA 17076
|| | || |||||| |||||||||||| | ||| ||||||| || || || |||||
Sbjct 44830362 CGTGAGGCCAGGCATCGGTCCTCGTTTCTTGAGCCAGAATATCGATGCAAAAGAACCAGA 44830421
Query 17077 AAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTT 17136
|||||| || || || || | || || || | | |||| | || || || |||||
Sbjct 44830422 AAAGAAGATGCCTTCTACTGCAGCGAAGGCTACAACATGTTCACCATAGGTAGCCTCTTT 44830481
Query 17137 GTTACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTAT 17196
|| | |||||| | |||| || || || | ||| | ||| ||||| ||| ||
Sbjct 44830482 GTCCCCAATCCAGCGCAAGGCCCAATCTGCCTTCTTCTTGACACAAGGCATCG-TTCAAT 44830540
Query 17197 GGCCTT--AAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGG 17254
||| || | | || ||| | |||| | || || | || || || || || || ||
Sbjct 44830541 GGCATTGAAGAGAAATTCCC--TTTCTTTGAGATCTTTGATGTAAGTGTCAATAAGGAGA 44830598
Query 17255 CTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCT 17314
|| |||||||| || |||||||| |||||||| || || || || || || || ||||||
Sbjct 44830599 CTATACATTTCAGAATGTATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCT 44830658
Query 17315 TCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCG 17374
|| | || |||||| | ||||| ||| | | |||||| || || ||||| ||
Sbjct 44830659 TCTGTAATCTGAACTATTTGGCTAAATCGCTCCACCAAATTTTCATTTACTATGCCATCA 44830718
Query 17375 CTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGTCCGGTGTAAGAACG 17434
|| || || || || ||| | ||| || |||||| | || || || | ||
Sbjct 44830719 CTTGCTGCAAAGAAAACCAGAACATGGGATATAAAATATCTCTCCTCGGGCTTCAGGGGT 44830778
Query 17435 CGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACT 17494
||||| | | || ||||| | ||||| || |||| |||||| || |||| |
Sbjct 44830779 TCCCAGTGCCGAATGTCCTTGGACAGGTCCACCTCCTCGGTGGTCCAGAAGGAAGCCTCC 44830838
Query 17495 GCCTTTTTATACATATTCCAAATATCATTGTATTGTATGGGGAA 17538
||||| |||||||| | ||| ||||||| ||| | ||||||||
Sbjct 44830839 GCCTTCTTATACATCTGCCAGATATCATGGTACTCGATGGGGAA 44830882
Score = 127 bits (140), Expect = 2e-24
Identities = 374/570 (66%), Gaps = 11/570 (2%)
Strand=Plus/Minus
Query 16959 TCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATG 17018
|||| || || || | || ||||| ||||| || ||||| |||||||| || |||||||
Sbjct 144506201 TCAGGCAAGCAAAGTAACAGTGTAAACCCTCATCACTGCTAATAAGTTCATTGGAAAATG 144506142
Query 17019 TCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAA 17078
| | || |||||| |||| ||||||| | ||| |||||| || || || |||||||
Sbjct 144506141 TGAGGCCAGGCATCAGTCCTTGTTTCTTGAGCCAGAATATCAGTGCAAAAGAACCAGAAA 144506082
Query 17079 AGAATATACCCTCGACGGATGCAAACGC--GAT--TAATCGTTCGGCGTACGTCGCGTCT 17134
|||| | | || | ||||| || || | ||||| | | || ||||
Sbjct 144506081 AGAAGGTGCTTTCCGCCAGGGCAAAGGCTGCATGCAACACGTTCTCCATGGGTAATGTCT 144506022
Query 17135 TTGTTACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCT 17194
||||| | |||||| | ||||| | || || | ||| | | | |||||||||
Sbjct 144506021 TTGTTCCCAATCCAACACAAGACCCAACCTGCCTTCTTCTTGACAC-AGGCATCGTTTCA 144505963
Query 17195 ATGGC-CTTAA-ATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTA 17252
||||| || || | || ||| |||| | | | | || ||| || || || || |
Sbjct 144505962 ATGGCACTGAAGAGAAATTCCCTTTCT----TTGTTATCTTTAATATGTGTCAATAAGGA 144505907
Query 17253 GGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGG 17312
| | | ||||| || | |||||| || || || || || || || || ||||| ||
Sbjct 144505906 GATTATTTATTTCAGAATATATGTTTTCTATAGCAATTTGGAAGCCATAGAAGCAGGAGG 144505847
Query 17313 CTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGT 17372
||| | || |||||||| ||| ||||| | | ||||| | | || || |
Sbjct 144505846 TTTCTGTAATCTGAACTTCTTGAACAAATTGTTCCACGAAGTTTTCATCTATTATCCCAT 144505787
Query 17373 CGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGTCCGGTGTAAGAA 17432
| | || ||||| || |||| ||||| || |||||| ||| || || | ||
Sbjct 144505786 CACATGCTGCGAAGAAAGCCAGAATATGGGATATAAAATATCTTTACTCAGGCTTCAGGG 144505727
Query 17433 CGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCA 17492
| ||||| | | || ||||| | ||||| || | || |||| ||| | ||
Sbjct 144505726 CTTCCCAGTGCCAAATGTCCTTGGACAGGTCCACCTCCTGGGCCATCCAGAAAGAAACCT 144505667
Query 17493 CTGCCTTTTTATACATATTCCAAATATCAT 17522
|| | || || ||||| |||||||||||||
Sbjct 144505666 CTACTTTCTTTTACATTTTCCAAATATCAT 144505637
>seq39
Length=107640188
Score = 105 bits (116), Expect = 7e-18
Identities = 96/121 (79%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 16986 CCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCT 17045
|||| |||||||| |||||||| ||||||||||| | ||||||||| |||||||||||
Sbjct 97368599 CCTCATCTCTGCTAATAAGTTCATTAGAAAATGTGAGGCCGGGCATCAGTCCTCGTTTCT 97368658
Query 17046 TTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACG 17105
| | ||| ||||||| || || || || |||||||| || || || || | ||||| |
Sbjct 97368659 TGAGCCAGAATATCGACGCAAAAGAACCGGAAAAGAAAATGCCTTCCACTGCAGCAAAGG 97368718
Query 17106 C 17106
|
Sbjct 97368719 C 97368719
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517282227513480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |