Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gorilla_20gorilla_20gorilla_20[refseq_20GCF_5F000151905.2_202014-12-
19] 40,711 sequences; 3,063,362,794 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq931 253 2e-62
seq377 102 8e-17
seq39 93.3 4e-14
>seq931
Length=156331669
Score = 253 bits (280), Expect = 2e-62
Identities = 575/854 (67%), Gaps = 18/854 (2%)
Strand=Plus/Plus
Query 15935 TCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTTCCATAAAATCAAA-GGGATTAGT 15993
|| ||||||||||| |||| | || ||||| ||| |||| ||||| ||| | |
Sbjct 44830047 TCAAAGAAGTTAGTCTTTCAGT-----GAAATATTCTCCGTAAAGTCAAATGGGCTCTCT 44830101
Query 15994 AGCTGAAAATATCTTAGAGTACCCCAGTTCCGTAACTAATCTATCTGCTACAAATTCTAT 16053
| || || | ||| | ||||||||| | | ||| ||||| ||||| || ||
Sbjct 44830102 A-CTCCGAAAACCTTGCTAAAACCCAGTTCCAGCATAAGTCTGTCTGCCACAAACTCAAT 44830160
Query 16054 ATATTGACACATTA-AGTCGCAATTAATTCCTATAAGTCGTACCGGAAGAGCTTTTGTTA 16112
||||| ||||| ||| |||||| || || || || || || | || | || |
Sbjct 44830161 GTATTGCTTCATTAGAGT-GCAATTCATCCCAATGAGCTTCACAGGCAAGGCCTCGGTGA 44830219
Query 16113 AAAATTGTTGTTCTATCACAACCGCTTCTTTAATGATATCGGTGGCTCGTGTTTCAGACG 16172
|||| |||||||||| ||| || | |||| || || | || || || |
Sbjct 44830220 GGAATTCTTGTTCTATCTGAACAGCATTGATAATTATTTCTCTCACTTTCTCCTCCGATG 44830279
Query 16173 GTGTATGGTTTAGGTGTTTAAACATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTC 16232
|| | || |||||||| ||||| | || || || || || |||| || || ||||
Sbjct 44830280 GTTTGTGTACCAGGTGTTTGAACATCAAGCAAGCAAAATCACAGTGTAAACCCTCATCTC 44830339
Query 16233 TGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGA 16292
|||| |||||||| |||||||| || | || ||||| |||||||||||| | |||||
Sbjct 44830340 TGCTAATAAGTTCATTGGAAAACGTGAGGCCAGGCATCGGTCCTCGTTTCTTGAGCCAGA 44830399
Query 16293 ATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGCGATTAATC 16352
|||||| ||||| || || |||||||| || || || || | || || || | |
Sbjct 44830400 ATATCGATGCAAAAGAACCAGAAAAGAAGATGCCTTCTACTGCAGCGAAGGCTACAACAT 44830459
Query 16353 GTTCCGCGTACGTAGCATCTTTATTACGAATCCATTTCTGTACCCATTCGGCTTTTTGTT 16412
|||| | || ||||| ||||| | | |||||| | |||| || || || | |
Sbjct 44830460 GTTCACCATAGGTAGCCTCTTTGTCCCCAATCCAGCGCAAGGCCCAATCTGCCTTCTTCT 44830519
Query 16413 TTATACAATCCATCGTTTCTATGGCCTT--AAACAATTTCTCTTTTTCCTGAATATCGAT 16470
| | |||| ||||| ||| ||||| || | | || ||| | |||| | | ||| |
Sbjct 44830520 TGACACAAGGCATCG-TTCAATGGCATTGAAGAGAAATTCCC--TTTCTTTGAGATCTTT 44830576
Query 16471 TATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTG 16530
|| || || ||||| || | ||| |||||||| || |||||||| || ||||| || ||
Sbjct 44830577 GATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGCAATTTG 44830636
Query 16531 AAATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAG 16590
|| |||||||| || || || || | || || ||| | |||||| ||| |||
Sbjct 44830637 GAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTATTTGGCTAAATCGCTCCACCAA 44830696
Query 16591 GTTCTCATTCACGATACCGTCACTTGCAGCAA--AAAACGCCAATATGTGCTTAATGAAA 16648
|| ||||| || || || |||||||| |||| ||||| || ||| | | || |||
Sbjct 44830697 ATTTTCATTTACTATGCCATCACTTGCTGCAAAGAAAACCAGAACATGGGAT--ATAAAA 44830754
Query 16649 TATTTTTCGTCAGATGTAAGAATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCT 16708
||| | || || | | || | ||| | | || ||||| | ||||| ||
Sbjct 44830755 TATCTCTCCTCGGGCTTCAGGGGTTCCCAGTGCCGAATGTCCTTGGACAGGTCCACCTCC 44830814
Query 16709 TCTGGCGTCCAAAAGCTAGCCACTGCCTTTTTATACATTTTCCAAATATCATTGTATTGT 16768
|| | ||||| ||| |||| | ||||| |||||||| | ||| ||||||| ||| |
Sbjct 44830815 TCGGTGGTCCAGAAGGAAGCCTCCGCCTTCTTATACATCTGCCAGATATCATGGTACTCG 44830874
Query 16769 ATGGGAAATACGAC 16782
||||| || | |||
Sbjct 44830875 ATGGGGAAGATGAC 44830888
>seq377
Length=146757320
Score = 102 bits (112), Expect = 8e-17
Identities = 103/134 (77%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 16224 CTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCT 16283
|||| ||||||||||| ||||| ||||||||||| | |||||||| |||| ||||
Sbjct 103162975 CTTCATCTCTGCTGATGAGTTCATTGGAAAAAGTGAGTCCTGGCATAAGACCTCTCTTCT 103163034
Query 16284 TTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAG 16343
||| ||||||||| |||||||| || || || ||||| | || || |||| ||||| |
Sbjct 103163035 TTAGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAACTCCTTCTACAGCAGCAAAGG 103163094
Query 16344 CGATTAATCGTTCC 16357
| | | || ||||
Sbjct 103163095 CCACCACTCTTTCC 103163108
>seq39
Length=107640188
Score = 93.3 bits (102), Expect = 4e-14
Identities = 92/119 (77%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 16226 TCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTT 16285
|| |||||||| |||||||| || ||||| || | || ||||| ||||||||||||
Sbjct 97368601 TCATCTCTGCTAATAAGTTCATTAGAAAATGTGAGGCCGGGCATCAGTCCTCGTTTCTTG 97368660
Query 16286 AACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGC 16344
| ||||||||||| ||||| || || |||||||| || || || || | ||||| ||
Sbjct 97368661 AGCCAGAATATCGACGCAAAAGAACCGGAAAAGAAAATGCCTTCCACTGCAGCAAAGGC 97368719
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511154147604520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |