Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gorilla_20gorilla_20gorilla_20[refseq_20GCF_5F000151905.2_202014-12- 19] 40,711 sequences; 3,063,362,794 total letters Query= NC_001901.1 Length=46375 Score E Sequences producing significant alignments: (Bits) Value seq24626 365 1e-96 >seq24626 Length=2868 Score = 365 bits (404), Expect = 1e-96 Identities = 704/1033 (68%), Gaps = 4/1033 (0%) Strand=Plus/Plus Query 23246 GAGCGTTGATTTGCTGCTTGCTCAAATACGGTGCGCATCTTGATCTGGCCTTTACCAACT 23305 |||||||||| || || ||||| || || | |||| |||||| |||||||||||| Sbjct 9 GAGCGTTGATCAATGGCCTGTTCAAAAACAGTTCTCATCCGGATCTGACCTTTACCAACT 68 Query 23306 TCATCAGTGACCCGCACGACCTGTCGCAAGACCATAGCTCCCCAGGTATTTCGAATCTGC 23365 ||||| || | || || || | | | ||||| |||||||| || ||||| ||| Sbjct 69 TCATCCGTTTCACGTACAACATTTTTTAGAACCATGCTTCCCCAGGCATCCCGAATTTGC 128 Query 23366 TCCTCCATCCACCGGGACTGATTGCCGTTAGTAAGGCTGTATTTGGTCAGGAGCAGGCGG 23425 |||||||||||| |||||||| ||| ||| || |||||||||||| || | | || Sbjct 129 TCCTCCATCCACGGGGACTGAGAGCCATTACTATTGCTGTATTTGGTAAGCAAAATACGT 188 Query 23426 ACGACAGGTTCAAAGCCGCCCAAATCGACGGTTTCAAGCAGGTCGAGCAGCATGGTGAAA 23485 || |||| || || || | ||| ||| | | ||||| || | ||||| |||| Sbjct 189 ACATCAGGCTCGAACCCTTTAAGATCAACGTTCTTGAGCAGATCACGAAGCATATCGAAA 248 Query 23486 AACTGAAGAACTGATGCATAGTCGAACAGCTCTGCAGGGGTTGCTACCACGATGACGTCA 23545 ||||| || | || | ||||| |||| ||| ||||| || | || | | || ||| Sbjct 249 AACTGCAGTGCGGAGGTGTAGTCAAACAACTCAGCAGGCGTGGGAACAATCAGCACATCA 308 Query 23546 GCAGCACAGACAACGTTAATAGTTCCCGTACCCAAGTTTGGCGCGCTGTCTATGACGATA 23605 |||||||| || || ||||| || || |||||| ||| ||||||||||| || || || Sbjct 309 GCAGCACATACGACATTAATCGTGCCGATACCCAGGTTAGGCGCGCTGTCAATAACTATG 368 Query 23606 ATGTCGTAGTTATCCCATACAGACTCGATAGCAGCACGAAGCATCAGATGAGG-GGGATG 23664 | || |||| || |||| || || || || |||||||| || || | || Sbjct 369 ACATCATAGTCATGAGCAACAGTTTCAATGGCCAGTCGGAGCATCAGGTGTGGATCGGTG 428 Query 23665 AGGTAGCTTCCCCTCGGAATGGTACTGCATCAGATCTGTTTCAATGCGGTGAAGGGCCAG 23724 || || || || || | | ||| | || |||||||| ||||| || ||||| Sbjct 429 -GGCAGTTTACCTTCATCAAATTTGCCCATTAACTCAGTTTCAATACGGTGCAGAGCCAG 487 Query 23725 GCAGCTGGGGATTATGTCGAGACCCGGCCAGCATGTTGGTTTTATCGCATATTCAGCGTT 23784 ||| || || ||||| || ||||||||||| || || ||||| ||||| | | Sbjct 488 ACAGGAAGGAATAATGTCAAGCCCCGGCCAGCAAGTGGGCTTTATTGCATAAGTGACATC 547 Query 23785 GTCGCGTTTACCC-AGGTAAAATGGAAGCAGTGTATCGTCTGCGTGAATGTGCAAATCAG 23843 ||| | ||| ||| || || || || || || || || ||||| ||||| || | ||| | Sbjct 548 GTC-CTTTTCCCCAAGATAGAAAGGCAGGAGAGTGTCTTCTGCATGAATATGAAGATCTG 606 Query 23844 GAACGTAACCGTGGTACATAGATGCAGTCCCTTGCGGGTCGTTCCCTTCAACGAGTAGGA 23903 | || | ||||| ||||| || || || || || |||||||| ||||| ||||| | | Sbjct 607 GTACCCATCCGTGATACATTGAGGCTGTTCCCTGGGGGTCGTTACCTTCCACGAGCAAAA 666 Query 23904 CGCGGTGCCCTTGCAAGGCTAACCATTGCGCCTGGTGTACTGCAGATGAGGTTTTATAAA 23963 | || |||| | || || | || || | || || | | ||||||||| |||| Sbjct 667 CACGTAGCCCCTTCAGAGCCAGATCCTGAGCAAGATGAACAGAAACTGAGGTTTTGTAAA 726 Query 23964 CCCCTCCCTTGTGTGACATAACGGAAAGTACAACCGGGTTTTTATCGTCAGGTCTTTGGT 24023 | || || || || | ||| | || || | || |||| | | | Sbjct 727 CGCCGCCTTTATGGGCAGCAACCCCGATCACCGGTGGAAATACGTCTTCAGCACGTCGCA 786 Query 24024 TTGGGTTACCAAACACACTCCGCATATGGCTAATTTGGTCAATTGTGTAGCCAGCGCGAC 24083 | | ||||||||||| |||||||| ||||||| |||||||| || ||| | || Sbjct 787 ATCGCGTACCAAACACATCACGCATATGATTAATTTGTTCAATTGTATAACCAACACGTT 846 Query 24084 GTTCTACTCGGCCCCTCATCTCAAAATCAGGAGCCGGTAGACGACCAGCTTTTTCCGCGT 24143 | || || || || | || || | ||| || |||||| || || ||||| || || | Sbjct 847 GCTCAACCCGTCCTCGAATTTCCATATCCGGGTGCGGTAGTCGCCCTGCTTTCTCGGCAT 906 Query 24144 CTCTGATAGCCTGCGGTGTTACGCCGATCAGGTCTGCAACTTCTGTTATACCCCAGCGGC 24203 ||||||||||||| | | || || | | || || |||| ||| | |||||| | Sbjct 907 CTCTGATAGCCTGAGAAGAAACCCCAACTAAATCCGCTGCTTCACCTATTCTCCAGCGCC 966 Query 24204 GAGTAATACGACGCGCTTCCGGGCTGTCATCGCCGAACTGTGCGATGGCAATAGCGCGCG 24263 | || || | |||||||||||||||||| |||||||| ||||| ||||| || Sbjct 967 GGGTTATTTTCCTCGCTTCCGGGCTGTCATCATTAAACTGTGCAATGGCGATAGCCTTCG 1026 Query 24264 TCATTTCCTGACC 24276 ||||||| ||||| Sbjct 1027 TCATTTCATGACC 1039 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148206715826934