Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gorilla_20gorilla_20gorilla_20[refseq_20GCF_5F000151905.2_202014-12-
19] 40,711 sequences; 3,063,362,794 total letters
Query= NC_001962.1
Length=128413
Score E
Sequences producing significant alignments: (Bits) Value
seq1 111 1e-19
seq168 104 2e-17
seq235 95.1 1e-14
seq931 86.0 5e-12
seq885 82.4 6e-11
>seq1
Length=228908639
Score = 111 bits (122), Expect = 1e-19
Identities = 154/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 25031 AAAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACC 25090
||||||||| || ||| | ||||| | ||||| || ||||| ||| ||| | |||||
Sbjct 172115947 AAAAATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGCTGAACC 172116006
Query 25091 CGCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGA 25150
| | || ||| | | || | ||| || || ||||| ||||| | || ||
Sbjct 172116007 CTCGGATACGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGA 172116066
Query 25151 TCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTA 25210
||| || ||||| |||||||| ||||| || |||||||| ||| || | || ||
Sbjct 172116067 TCAGCAGAGACTGATCTTTGCTGGCAAGCAGCTGGAAGATGGACGTACTTTGTCTGACTA 172116126
Query 25211 CAATATTCAAAAGGAATCTACTCTTCACATGGTGTT 25246
||||||||||||||| ||||||||||| | |||||
Sbjct 172116127 CAATATTCAAAAGGAGTCTACTCTTCATCTTGTGTT 172116162
>seq168
Length=201391403
Score = 104 bits (114), Expect = 2e-17
Identities = 152/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 25032 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 25091
|||||||| || ||| | ||||| | ||||| || ||||| ||| ||| ||||||
Sbjct 5653671 AAAATGCAGATTTTCGTGAAAACCCTTACGGGAAAGACCATCACCCTCGAGGTTGAACCC 5653730
Query 25092 GCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 25151
| || ||| | | || | ||| || || ||||| ||||| | || |||
Sbjct 5653731 TCGGATACGATAGAAAATGTAAAGGCCAAGATACAGGATAAGGAAGGAATTCCTCCTGAT 5653790
Query 25152 CAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTAC 25211
|| || ||||| |||||||| ||||| || |||||||| ||| || | || |||
Sbjct 5653791 CAGCAGAGACTGATCTTTGCTGGCAAGCAGCTGGAAGATGGACGTACTTTGTCTGACTAC 5653850
Query 25212 AATATTCAAAAGGAATCTACTCTTCACATGGTGTT 25246
|||||||||||||| ||||||||||| | |||||
Sbjct 5653851 AATATTCAAAAGGAGTCTACTCTTCATCTTGTGTT 5653885
>seq235
Length=173266796
Score = 95.1 bits (104), Expect = 1e-14
Identities = 150/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 25032 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 25091
|||||||| || ||||| ||||| | | || || ||||| ||| ||| | ||||||
Sbjct 115827691 AAAATGCAGATTTTCATGAAAACTCTTATGGAGAAGACCATCACCCTCGAGGCTGAACCC 115827750
Query 25092 GCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 25151
|| || | | || | ||| || || ||||| ||||| | || |||
Sbjct 115827751 TTGGATACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 115827810
Query 25152 CAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTAC 25211
|| |||||||| |||||||| || || ||| |||||||| ||| || | || |||
Sbjct 115827811 CAGCAAAGACTGATCTTTGCTGGAAAGCAACTGGAAGATGGATGTACTTTGTCTGACTAC 115827870
Query 25212 AATATTCAAAAGGAATCTACTCTTCACATGGTGTT 25246
| |||||||||||| ||||||||||| | |||||
Sbjct 115827871 AGTATTCAAAAGGATTCTACTCTTCATCTTGTGTT 115827905
>seq931
Length=156331669
Score = 86.0 bits (94), Expect = 5e-12
Identities = 148/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 25032 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 25091
||| |||| || ||| | ||||| | | ||| || ||||| ||| || ||||||
Sbjct 3273250 AAACTGCAGATTTTCGTGAAAACCCTAAGGGGGAAGACCATCACCCTTGAGGTTGAACCC 3273309
Query 25092 GCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 25151
|||| || | | || | ||| || || ||||| ||||| | || |||
Sbjct 3273310 TCAGATGCGATAGAAAATGTAAAGGCCAAGATCTAGGATAAGGAAGGAATTCCTCCTGAT 3273369
Query 25152 CAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTAC 25211
|| |||||||| |||||||| ||||| ||| |||||||| ||| || | || | |
Sbjct 3273370 CAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTGC 3273429
Query 25212 AATATTCAAAAGGAATCTACTCTTCACATGGTGTT 25246
|| ||||||||||| |||||||||| | |||||
Sbjct 3273430 AACATTCAAAAGGAGCCTACTCTTCATCTTGTGTT 3273464
>seq885
Length=63231202
Score = 82.4 bits (90), Expect = 6e-11
Identities = 147/215 (68%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 25032 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 25091
|||||||| || || | ||||| | || || || ||||| ||| ||| | ||||||
Sbjct 17717156 AAAATGCAGATTTTTGTGAAAACCCTCACAGGGAAGACCATCACCCTCGAGGCTGAACCC 17717215
Query 25092 GCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 25151
|||| ||| | | || | ||| || | ||||| |||| | || |||
Sbjct 17717216 TCAGAAACGATAGAAAATATAAAGGCCAAGACCCAGGATAAGTAAGGAATTCCTCCTGAT 17717275
Query 25152 CAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTAC 25211
|| ||||||| |||||||| |||| ||| |||| ||| || || | || |||
Sbjct 17717276 CAGTAAAGACTGATCTTTGCTAGCAAGCAACTGGAGGATGTATGTGCTTTGTCTGACTAC 17717335
Query 25212 AATATTCAAAAGGAATCTACTCTTCACATGGTGTT 25246
|| ||||||||||| ||||||||||| | |||||
Sbjct 17717336 AACATTCAAAAGGAGTCTACTCTTCATCTTGTGTT 17717370
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 410592976877354
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |