Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gorilla_20gorilla_20gorilla_20[refseq_20GCF_5F000151905.2_202014-12- 19] 40,711 sequences; 3,063,362,794 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq931 311 9e-80 seq646 143 3e-29 seq287 136 4e-27 seq219 136 4e-27 seq377 131 2e-25 seq389 129 6e-25 seq728 116 4e-21 seq1 113 5e-20 seq168 111 2e-19 seq126 109 6e-19 seq39 105 7e-18 seq773 93.3 4e-14 >seq931 Length=156331669 Score = 311 bits (344), Expect = 9e-80 Identities = 554/804 (69%), Gaps = 11/804 (1%) Strand=Plus/Minus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 |||||||||||| | | ||||| |||| || || || |||||||| | |||| || Sbjct 44830921 GAGCCGCTGCTGAGAGGAAACCCTTGCCGCTTTGTCATCTTCCCCATCGAGTACCATGAT 44830862 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| ||||| || ||||| ||||| || ||||||||| |||||||||||||||| Sbjct 44830861 ATCTGGCAGATGTATAAGAAGGCGGAGGCTTCCTTCTGGACCACCGAGGAGGTGGACCTG 44830802 Query 116696 TCCAAGGACACGAGCGACTGGGAGCGCTTGAACGACAACGAGCGCCATTTCATCAAGCAC 116755 |||||||||| | ||||||| | | |||| | | ||| | |||| || || Sbjct 44830801 TCCAAGGACATTCGGCACTGGGAACCCCTGAAGCCCGAGGAGAGATATTTTATATCCCAT 44830742 Query 116756 GTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG-TTT 116814 || |||| || || || || || || ||||| || || || ||| |||| ||||| ||| Sbjct 44830741 GTTCTGGTTTTCTTTGCAGCAAGTGATGGCATAGTAAATGAAAATTTGGTGGAGCGATTT 44830682 Query 116815 CGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGA 116874 || || || ||| | | || || || || ||||| ||||| || || |||||||| Sbjct 44830681 AGC-CAAATAGTTCAGATTACAGAAGCCCGCTGTTTCTATGGCTTCCAAATTGCCATGGA 44830623 Query 116875 GAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT----GCGCTCTTCGG 116930 ||| | || || ||||||||| ||| || ||||| ||| | | ||| | Sbjct 44830622 AAACATACATTCTGAAATGTATAGTCTCCTTATTGACACTTACATCAAAGATCTCAAAGA 44830563 Query 116931 AGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCG 116990 | | ||| || | || || ||||| || |||||||| || ||||| ||||||| | Sbjct 44830562 AAGGGAATTTC----TCTTCAATGCCATTGA-ACGATGCCTTGTGTCAAGAAGAAGGCAG 44830508 Query 116991 AGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCT 117050 | ||||| |||||||||| | | || |||||| ||| || || | | || |||| Sbjct 44830507 ATTGGGCCTTGCGCTGGATTGGGGACAAAGAGGCTACCTATGGTGAACATGTTGTAGCCT 44830448 Query 117051 TCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGA 117110 |||| || || || ||| |||||||||| || ||| || | ||||| |||||||||| Sbjct 44830447 TCGCTGCAGTAGAAGGCATCTTCTTTTCTGGTTCTTTTGCATCGATATTCTGGCTCAAGA 44830388 Query 117111 AACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTC 117170 |||| || | ||||| ||||| || || ||| || || || ||| || |||||| Sbjct 44830387 AACGAGGACCGATGCCTGGCCTCACGTTTTCCAATGAACTTATTAGCAGAGATGAGGGTT 44830328 Query 117171 TGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGGCGC 117230 | || || || ||||| || ||| ||||||| || |||| || ||| | || | Sbjct 44830327 TACACTGTGATTTTGCTTGCTTGATGTTCAAACACCTGGTACACAAACCATCGGAGGAGA 44830268 Query 117231 GCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCGC 117290 || || || || | | | | || || || || || ||||||||||| || Sbjct 44830267 AAGTGAGAGAAATAATTATCAATGCTGTTCAGATAGAACAAGAATTCCTCACCGAGGCCT 44830208 Query 117291 TGCCGGTGCGTCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACATCGAGTTCGTCG 117350 |||| ||| || | || | |||||| ||| ||||||||| ||||| || | Sbjct 44830207 TGCCTGTGAAGCTCATTGGGATGAATTGCACTCTAATGAAGCAATACATTGAGTTTGTGG 44830148 Query 117351 CCGACAGGCTGCTGCTCGAGCTGG 117374 | ||||| || |||| || |||| Sbjct 44830147 CAGACAGACTTATGCTGGAACTGG 44830124 >seq646 Length=133456746 Score = 143 bits (158), Expect = 3e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || ||||| ||||||||| |||| || || ||| Sbjct 124982252 ATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTGGAGCCCAGT 124982193 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||||| ||| || | ||||| || |||||||| | |||||| Sbjct 124982192 GACACCATCGAGAATGTCAAGGCAAAGATCCAAGACAAGGAAGGCATCCCTCCTGACCAG 124982133 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | | |||| || || ||||||||||| || | |||||||| ||||||||| Sbjct 124982132 CAGAGGTTAATCTTTGCTGGGAAACAGCTGGAAGATGGACGCACCCTGTCTGACTACAAC 124982073 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||| ||| |||| ||||| | || ||||||||||||| || Sbjct 124982072 ATCCAGAAAGAGTCCACTCTGCACTTGGTCCTGCGCTTGAGGGGGGG 124982026 Score = 131 bits (144), Expect = 2e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || || || ||||||||| |||| ||||| ||| Sbjct 124982708 ATGCAGATCTTCGTGAAGACCCTGACTGGTAAGACCATCACCCTCGAGGTCGAGCCCAGT 124982649 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||||| ||| || | ||||| || |||||||| | |||||| Sbjct 124982648 GACACCATCGAGAATGTCAAGGCAAAGATCCAAGACAAGGAAGGCATCCCTCCTGACCAG 124982589 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | | |||| || || || |||||||| || | ||||||||| ||||||||| Sbjct 124982588 CAGAGGTTGATCTTTGCTGGAAAGCAGCTGGAGGATGGGCGCACCCTGTCTGACTACAAC 124982529 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 |||||||| ||| |||| ||||| || ||| Sbjct 124982528 ATCCAGAAAGAGTCCACCCTGCACCTGGTG 124982499 Score = 129 bits (142), Expect = 6e-25 Identities = 155/211 (73%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || ||||| || || || || || || ||||||||| |||| ||||| ||| Sbjct 124983165 AATGCAGATCTTCGTGAAGACTCTGACTGGTAAGACCATCACCCTCGAGGTCGAGCCCAG 124983106 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | | |||||| ||| || | || || || |||||||| | ||||| Sbjct 124983105 TGACACCATCGAGAATGTCAAGGCAAAGATCCAAGATAAGGAAGGCATCCCTCCTGACCA 124983046 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | || |||| || || ||||||||||| || | ||||||||| || ||||| Sbjct 124983045 GCAGAGGCTGATCTTTGCTGGAAAACAGCTGGAAGATGGGCGCACCCTGTCTGATTACAA 124982986 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 ||||||||| ||| | || ||||| || ||| Sbjct 124982985 CATCCAGAAAGAGTCTACCCTGCACCTGGTG 124982955 Score = 127 bits (140), Expect = 2e-24 Identities = 157/212 (74%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || ||||| || || || || || || ||||||||| |||| ||||| ||| Sbjct 124982481 AATGCAGATCTTCGTGAAGACCCTGACTGGTAAGACCATCACCCTCGAGGTCGAGCCCAG 124982422 Query 40749 CGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 |||| | | | |||| |||||| ||| || | ||||| || |||||||| | |||| Sbjct 124982421 TGACACCATCGAGAACG-TCAAGGCAAAGATCCAAGACAAGGAAGGCATCCCTCCTGACC 124982363 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 |||| | | |||| || || || |||||||| || | |||||||| ||||||| Sbjct 124982362 AGCAGAGGTTGATCTTTGCCGGAAAGCAGCTGGAAGATGGACGCACCCTGTCTGACTACA 124982303 Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 |||||||||| ||| | || ||||| || ||| Sbjct 124982302 ACATCCAGAAAGAGTCTACCCTGCACCTGGTG 124982271 Score = 127 bits (140), Expect = 2e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || || || ||||||||| | || ||||| ||| Sbjct 124982936 ATGCAGATCTTCGTGAAGACCCTGACTGGTAAGACCATCACCCTTGAGGTCGAGCCCAGT 124982877 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||||| ||| || | ||||| || |||||||| | |||||| Sbjct 124982876 GACACCATCGAGAATGTCAAGGCAAAGATCCAAGACAAGGAAGGCATCCCTCCTGACCAG 124982817 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | | |||| || || || |||||||| || | ||||||||| ||||||||| Sbjct 124982816 CAGAGGTTGATCTTTGCTGGAAAGCAGCTGGAAGATGGGCGCACCCTGTCTGACTACAAC 124982757 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 |||||||| ||| |||| ||||| || ||| Sbjct 124982756 ATCCAGAAAGAGTCCACCCTGCACCTGGTG 124982727 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || | || || ||||||||||| ||||||||| | || || | ||| Sbjct 115608451 ATGCAGATCTTTATGAACACCCTCACGGGCAAGACCATCACCCTTGAGGTGGGGCCCAGT 115608392 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||| | ||||| | ||||| |||||||||| | |||||| Sbjct 115608391 GACACCATTGAGAATGTCAAAGCTAAAATCCAAGACAAGGAGGGCATCCTGCCTGACCAG 115608332 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | || || | | ||||||||||||||| || | | || ||| ||||| ||| Sbjct 115608331 CAGTGTCTGATATTTGTGGGCAAACAGCTGGAGGATGGCCACAGTCTCTCAGACTAGAAC 115608272 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||| ||| ||| ||||| || ||| ||||| || | || ||| Sbjct 115608271 ATCCAGAAAGAGTCCATCCTGCACCTGGTGCTGCGCCTGCGAGGTGGC 115608224 >seq287 Length=159110946 Score = 136 bits (150), Expect = 4e-27 Identities = 169/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || | || || ||||| ||||| ||||||||| |||| ||||| ||| Sbjct 25710844 ATGCAGATCTTTGCGAAGACCCTCACAGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 25710785 Query 40750 GACAGCG-TGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | || || | |||||| |||||| ||||| |||||||| || ||||| Sbjct 25710784 GACACCACTGAGAATG-TCAAGGCCGAAATTCGAGACAAGGAGGGCATTCCACTTGACCA 25710726 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||| || || | ||||||||||||||||| || | ||||| ||| |||| ||| Sbjct 25710725 GCAACGTCTGATATTTGCGGGCAAACAGCTGGAGGATGGCCGCACTCTCTCAGACTGCAA 25710666 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||||||| ||| ||| ||||| || | | ||| | || | || ||| Sbjct 25710665 CATCCAGAAAGAGTCCATCCTGCACCTGGGGCTGCACCTGTGAGGTGGC 25710617 >seq219 Length=165317712 Score = 136 bits (150), Expect = 4e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 |||||||| || ||||| ||||| || || ||||| ||||||||| | || || || || Sbjct 62367036 AAAATGCAGATCTTCGTGAAAACCCTTACCGGCAAGACCATCACCCTTGAGGTGGAGCCC 62366977 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | |||| | | ||| | |||| || || | || || || ||||| ||| | ||| Sbjct 62366976 AGTGACACCATCGAAAATGTGAAGGCCAAGATCCAGGATAAGGAAGGCATTCCCCCCGAC 62366917 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 ||||| | ||||||| || ||||| |||||||| || | ||||| || |||||| Sbjct 62366916 CAGCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGACTAC 62366857 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||||||||| | || ||||| || || |||| |||| || || Sbjct 62366856 AACATCCAGAAGGAGTCGACCCTGCACCTGGTCCTGCGTCTGAGAGGTGG 62366807 Score = 132 bits (146), Expect = 5e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || ||||| |||||||| | || || || ||| Sbjct 62366577 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACTCTGGAGGTGGAGCCCAGT 62366518 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | ||| | |||| || || | || ||||| |||||||| | |||||| Sbjct 62366517 GACACCATCGAAAATGTGAAGGCCAAGATCCAAGATAAAGAAGGCATCCCTCCCGACCAG 62366458 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | ||||||| || ||||| |||||||| || | ||||| || ||||||||| Sbjct 62366457 CAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGACTACAAC 62366398 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||| ||| | || ||||| || || ||||| ||||||| ||| Sbjct 62366397 ATCCAGAAAGAGTCGACCCTGCACCTGGTCCTGCGCCTGAGGGGTGGC 62366350 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || ||||| ||||||||| | || || || ||| Sbjct 62366805 ATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTGGAAGTGGAGCCCAGT 62366746 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | ||| | |||| || || | || ||||| |||||||| | |||||| Sbjct 62366745 GACACCATCGAAAATGTGAAGGCCAAGATCCAGGATAAAGAAGGCATCCCTCCCGACCAG 62366686 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | ||||||| || ||||| |||||||| || | ||||| || ||||||||| Sbjct 62366685 CAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGACTACAAC 62366626 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||| | || ||||| || || |||| |||| || || Sbjct 62366625 ATCCAGAAGGAGTCGACCCTGCACCTGGTCCTGCGTCTGAGAGGTGG 62366579 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || ||||| ||||||||| | || || || ||| Sbjct 57062850 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAAGTGGAGCCCAGT 57062791 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | ||| | |||| || || | || ||||| ||||||||| || ||| Sbjct 57062790 GACACCATCGAAAATGTGAAGGCCAAGATCCAAGATAAAGAAGGCATCCCCCACGATCAG 57062731 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | ||||||| || ||||| |||||||| || | | || || ||||||||| Sbjct 57062730 CAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCGGTACTCTTTCTGACTACAAC 57062671 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||| | || ||||| || || |||| |||| || || Sbjct 57062670 ATCCAGAAGGAGTCGACCCTGCACCTGGTCCTGCGTCTGAGAGGTGG 57062624 Score = 116 bits (128), Expect = 4e-21 Identities = 166/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 |||||||| || ||||| ||||| || || ||||| | ||||||| | || || || || Sbjct 57063081 AAAATGCAGATCTTCGTGAAAACCCTTACTGGCAAGATCATCACCCTTGAAGTGGAGCCC 57063022 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCA-TCCCCGCGGA 40805 | | || | ||| |||||| ||||| | || ||||| |||| |||||| | | Sbjct 57063021 AGTGCCACTATCGAAAATGTCAAGGCCAAAATCCAAGATAAAGAAGGCAATCCCCGTG-A 57062963 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 |||||| | ||||||| || ||||| |||| ||| || | |||| || ||||| Sbjct 57062962 CCAGCAGAGGCTCATCTTTGCAGGCAAGCAGCGGGAAGATGGCCGCAGTCTTTCTGACTA 57062903 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||| ||| || |||||||| || |||| |||| || || Sbjct 57062902 CAACATCCAGAAAGAGTAGACCCTGCATCTGGTCCTGCGTCTGAGAGGTGG 57062852 >seq377 Length=146757320 Score = 131 bits (144), Expect = 2e-25 Identities = 165/228 (72%), Gaps = 18/228 (8%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || ||||| ||||| ||||||||| | || ||||| ||| Sbjct 124616480 ATGCAGATCTTTGTGAAGACCCTCACAGGCAAGACCATCACCCTTGAGGTCGAGCCCA-- 124616537 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || ||||| ||||||| ||||| ||||||||||| | |||||| Sbjct 124616538 ------GT---AACGCC-------AAAATTCAGGACAAGGAGGGCATCCCACCTGACCAG 124616581 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || || ||||||||||||||||| || | ||||| ||| ||||||||| Sbjct 124616582 CAGCGTCTGATACTTGCGGGCAAACAGCTGGAGGATGGCCGCACTCTCTCAGACTACAAC 124616641 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||| ||| |||| ||||| || ||| ||||| || | || ||| Sbjct 124616642 ATCCAGAAAGAGTCCACCCTGCACCTGGTGCTGCGCCTGCGAGGTGGC 124616689 >seq389 Length=121655618 Score = 129 bits (142), Expect = 6e-25 Identities = 157/214 (73%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || ||||||||||| ||||||||| | || ||||| ||| Sbjct 27659450 ATGCAGATCTTTGTGAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGCCCAGT 27659391 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||| | ||||||| ||||| ||||| || ||| | |||||| Sbjct 27659390 GACACCATTGAGAATGTCAATGCGAAAATTCAAGACAAGGAGGGTATACCCCCTGACCAG 27659331 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || || | || ||||||||||||| || | |||| ||| ||||||||| Sbjct 27659330 CAGCGTCTGATATTTGCCAGCAAACAGCTGGAGGATGGCCGCATTCTCTCAGACTACAAC 27659271 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGC 40903 |||||||| || |||| | ||| || ||| ||| Sbjct 27659270 ATCCAGAAACAGCCCACCCCGCACCTGGTGCTGC 27659237 >seq728 Length=90977943 Score = 116 bits (128), Expect = 4e-21 Identities = 154/214 (72%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || ||||||||||| ||||||||| | || ||| | ||||| Sbjct 41396462 ATGCAGATCTTTGTGAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCAAGCCCACC 41396521 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||| | ||||||| ||||| ||||| ||||| | ||||| Sbjct 41396522 GACACCATTTAGAATGTCAAAGCCAAAATTCAGGACAAGGAGGGTATCCCACCTTACCAG 41396581 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | || || | || || |||| |||||| || | | ||| ||| | ||||||| Sbjct 41396582 CAGCATCTGATATTTGCTGGGAAACGGCTGGAGGATGGCCACACTCTCTCAGGCTACAAC 41396641 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGC 40903 |||||||| ||| |||| || | || ||| ||| Sbjct 41396642 ATCCAGAAAGAGTCCACCCTAAACCTGGTGCTGC 41396675 Score = 100 bits (110), Expect = 3e-16 Identities = 146/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || | ||||| || ||||| ||||||||||||||| | || ||| | | | Sbjct 23980380 ATGCAGATCTCTGTAAAGACCCTCACAGGCAAAACCATCACCCTTGAGGTCCAGCCGAGT 23980321 Query 40750 GACAGC-GTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | ||| ||| | |||| | || || | |||||| | |||||||| | ||||| Sbjct 23980320 GACACCAGTGAAAATG-TCAAAGCCAAGATCCACGACAAGGGGGGCATCCTACCTGACCA 23980262 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | || || | | | ||||||| |||| || | || || || ||||| || Sbjct 23980261 GCAGCATCTGATATTTGTGAACAAACAGTTGGAGGATGGCCGTACTCTTTCAGACTATAA 23980202 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||| ||| |||| ||||| Sbjct 23980201 CATCCAGAAAGAGTCCACCCTGCA 23980178 >seq1 Length=228908639 Score = 113 bits (124), Expect = 5e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 |||||||| || ||||| || ||||| || ||||| ||||||||| |||| || || || Sbjct 197684218 AAAATGCAGATCTTCGTGAAGACGCTGACTGGCAAGACCATCACCCTCGAGGTGGAGCCC 197684159 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | |||| | | ||| | |||| || || || || || || ||||||| | ||| Sbjct 197684158 AGTGACACCATCGAAAATGTGAAGGCCAATATCCTGGATAAGGAAGGCATCCTTCCCGAC 197684099 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 ||||| | ||||||| || |||| ||||| || || | |||| || |||||| Sbjct 197684098 CAGCAGAGGCTCATCTTTGCAGGCATGCAGCTAGAAGATGGCTGCACTCTTTCTGACTAC 197684039 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||| ||| | || ||| | || || Sbjct 197684038 AACATCCAGAAAGAGTCGACCCTGTACCTGGT 197684007 >seq168 Length=201391403 Score = 111 bits (122), Expect = 2e-19 Identities = 159/220 (72%), Gaps = 3/220 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || ||||||||||| |||||||| | || ||| |||||| Sbjct 28010261 ATGCAGATCTTTGTGAAGACCCTCACGGGCAAGACCATCACTCTTGAGGTC-AAGCCAAG 28010319 Query 40750 -GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | | |||| | ||||||| |||| |||| ||||| | ||||| Sbjct 28010320 TGACACCATTGAGAATGTCAAAGCCAAAATTCAACACAAGGAGGT-ATCCCACCTGACCA 28010378 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | || || || |||||||||||||| || | | || ||| |||||||| Sbjct 28010379 GCAGCATCTGATACTTGCTGGCAAACAGCTGGAGGATGGCCAAACTCTCTCAGACTACAA 28010438 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTG 40908 ||||| ||| ||| |||||||||| || ||| ||||| || Sbjct 28010439 CATCCGGAAAGAGTCCACGCTGCACCTGGTGCTGCGCCTG 28010478 >seq126 Length=135448346 Score = 109 bits (120), Expect = 6e-19 Identities = 166/238 (70%), Gaps = 10/238 (4%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || || ||||| ||||||||| | || || || ||| Sbjct 28265162 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTGGAAGTGGAGCCCAGT 28265103 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCG-------- 40801 |||| | || ||| | |||| || || | || ||||| |||| |||| Sbjct 28265102 GACACCATGGAAAATGTGAAGGCCAAGATCCAGGATAAAGAAGGCACCCCCCACCCCCAG 28265043 Query 40802 --CGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAA 40859 | |||||||| | ||||||| || ||||| |||||||| || | ||||| || Sbjct 28265042 CCCCGACCAGCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTC 28264983 Query 40860 CGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||||||||||||||| ||| | || ||||| || || ||| | ||||||| ||| Sbjct 28264982 TGACTACAACATCCAGAAAGAGTCGACCCTGCACCTGGTCCTGCACCTGAGGGGTGGC 28264925 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 |||||||| || ||||| || || || || |||| ||||| || | || || || || Sbjct 28265393 AAAATGCAGATCTTCGTGAAGACCCTTACCAGCAAGACCATTGCCCTTGAAGTGGAGCCC 28265334 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | |||| | | ||| | |||| || || | || || || ||||| || ||||| Sbjct 28265333 AGGGACACCATCGAAAATGTGAAGGCCAAGATCCAGGATAAGGAAGGCATTACCCCGGAC 28265274 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 ||||| | ||||||| || | ||| ||| |||| || || ||||| | ||||| Sbjct 28265273 CAGCAGAGGCTCATCTTTGCAGTCAAGCAGGTGGAAGATGACCGCACTCATTCTGACTAT 28265214 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||||| ||| | || ||||| || || || | |||| || || Sbjct 28265213 AACATCCAGAAAGAGTCGACCCTGCACCTGGTCCTGTGTCTGAGAGGTGG 28265164 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 ||||||||||| ||| ||||| || || ||||| ||| ||||| | || || || | Sbjct 40914648 AAAATGCAAATCTTCCCGAAAACCCTGACCGGCAAGACCGTCACCCTGGAGGTGGAGCCG 40914589 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | |||| | |||||| | |||| || || | | ||||||||||||||| | ||| Sbjct 40914588 AGTGACATCCTGCAAAATGTGAAGGCCAAGATCCATGTTAAAGAGGGCATCCCCCCTGAC 40914529 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 ||||| | ||||||| | ||||| ||| | || | | |||| | |||||| Sbjct 40914528 CAGCACAGTCTCATCTTTGTAGGCAAGCAGTTAGAATATGGCTGCACTGTTTGTGACTAC 40914469 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||| ||||| || | | ||||| || || | | ||||||| ||| Sbjct 40914468 AACATTCAGAAAAAGTCAGCCCTGCACCTGGTCCTCCATCTGAGGGGTGGC 40914418 >seq39 Length=107640188 Score = 105 bits (116), Expect = 7e-18 Identities = 91/113 (81%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 |||||||||||| | || ||||||||||| || || || |||||||| | |||| || Sbjct 97372391 GAGCCGCTGCTGAGAGAAAACCCCCGCCGCTTTGTCATCTTCCCCATCGAGTACCATGAT 97372332 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGT 116688 || |||| ||||| || ||||| ||||| || |||||||||| ||||||||| Sbjct 97372331 ATCTGGCAGATGTATAAGAAGGCAGAGGCTTCCTTCTGGACCGCCGAGGAGGT 97372279 >seq773 Length=81384781 Score = 93.3 bits (102), Expect = 4e-14 Identities = 156/223 (70%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 40696 ATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGC 40755 || || || || || ||||| ||| | ||||||||| | || ||||| ||| || | Sbjct 38779897 ATCTTTGTGAAGACCCTCACAGGCCAGACCATCACCCTTGAGGTCGAGCCCAGTGATGCC 38779838 Query 40756 G-TGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACG 40814 || || | |||| | ||||||| |||| ||||||||| | |||||||| | Sbjct 38779837 ACTGAGAATG-TCAAAGCCAAAATTCAAGACAGGTAGGGCATCCTACCTGACCAGCAGTG 38779779 Query 40815 ACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCA 40874 || || | | ||||||||||||| | || | | ||| ||| |||||||||||||| Sbjct 38779778 TCTGATATTTGAGGGCAAACAGCTGAAGGATGGCCACACACTCTTAGACTACAACATCCA 38779719 Query 40875 GAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||| ||| |||| ||| || || ||||| || | || ||| Sbjct 38779718 GAAAGAGTCCACCCTGTGCCTGATGCTGCGCCTGCGAGGTGGC 38779676 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 514957011389360