Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gorilla_20gorilla_20gorilla_20[refseq_20GCF_5F000151905.2_202014-12-
19] 40,711 sequences; 3,063,362,794 total letters
Query= NC_002520.1
Length=232392
Score E
Sequences producing significant alignments: (Bits) Value
seq235 102 1e-16
seq860 96.9 5e-15
seq786 95.1 2e-14
seq168 93.3 6e-14
seq1 93.3 6e-14
seq773 89.7 8e-13
seq931 86.0 9e-12
>seq235
Length=173266796
Score = 102 bits (112), Expect = 1e-16
Identities = 107/138 (78%), Gaps = 2/138 (1%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109
||||| | |||||| || || | ||| | |||||| || ||| || ||| | || || ||
Sbjct 115827920 CCACCACGAAGTCTCAACACAAGATGAAGAGTAGAATCCTTTTGA-ATACTGTAGTCAGA 115827862
Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169
| ||| | | ||| || | ||| ||||||||||| |||| |||||||||||| |||||
Sbjct 115827861 CAAAGTACATCCATCTTCCAGTTGCTTTCCAGCAAAGATCAGTCTTTGCTGATCAGGAGG 115827802
Query 146170 AATTCCTTCTTTATCTTG 146187
||||||||| ||||| ||
Sbjct 115827801 AATTCCTTCCTTATCCTG 115827784
>seq860
Length=57935654
Score = 96.9 bits (106), Expect = 5e-15
Identities = 148/207 (71%), Gaps = 3/207 (1%)
Strand=Plus/Plus
Query 10429 TTCCTAAAGGATGTTATGCAAGATTAGCTCCCAGATCTGATTTAGCTCTAAATAAATTTA 10488
||||| |||||||||| | || ||||||| || |||| || ||| ||| | |||
Sbjct 51797876 TTCCTTCTGGATGTTATGGA-GAGTAGCTCCAAGGTCTGGCTTGGCTGCAAAACACTTTG 51797934
Query 10489 TTGATATTGGAGCTGGAGTAATTGACGAAGATTATAGAGGAAATGTGGGAGTAATATTAT 10548
||||| | |||||||| || | || |||||||||||||||||||| || || || | |
Sbjct 51797935 TTGATGTAGGAGCTGGTGTCACAGATGAAGATTATAGAGGAAATGTTGGTGTTGTACTCT 51797994
Query 10549 TTAATCATTCTAATGAAGATTTTATAAT-AAATAGAGGAGATAGAATATCTCAATTAATA 10607
||||| || || ||| | ||| | | ||| | ||| ||| |||| | || | ||
Sbjct 51797995 TTAATTTTTGCAAAGAAAAGTTTGAAGTCAAAAAAAGGTGATCGAATTGCACAGCTCATT 51798054
Query 10608 TGTGAAAAAATTTTAT-ATCCTAAAAT 10633
|||||| ||||| | |||| ||||
Sbjct 51798055 TGTGAACGGATTTTTTAATCCAGAAAT 51798081
>seq786
Length=95888799
Score = 95.1 bits (104), Expect = 2e-14
Identities = 103/137 (75%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
||||| | ||||| || || ||||| | |||||| ||||| ||||| || | ||
Sbjct 10327975 CCACCACGCAGTCTCAACACAAAATGAAGAGTAGACTCTTTTTGAATATTGTAGCCAGAC 10327916
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| ||| | | ||| || | ||| || |||||||| ||| |||||||||||| ||||||
Sbjct 10327915 AAAGTACATCCATCTTCCAGTTGCTTGCCAGCAAAGATCGGTCTTTGCTGATCAGGAGGA 10327856
Query 146171 ATTCCTTCTTTATCTTG 146187
|||||||| ||||| ||
Sbjct 10327855 ATTCCTTCCTTATCCTG 10327839
>seq168
Length=201391403
Score = 93.3 bits (102), Expect = 6e-14
Identities = 105/138 (76%), Gaps = 2/138 (1%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109
||||| | |||||| || || | ||| | |||||| || ||| || ||||| || || ||
Sbjct 5653900 CCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGA-ATATTGTAGTCAGA 5653842
Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169
| ||| | | ||| || | || || |||||||| |||| ||| |||||||| |||||
Sbjct 5653841 CAAAGTACGTCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGG 5653782
Query 146170 AATTCCTTCTTTATCTTG 146187
||||||||| ||||| ||
Sbjct 5653781 AATTCCTTCCTTATCCTG 5653764
>seq1
Length=228908639
Score = 93.3 bits (102), Expect = 6e-14
Identities = 105/138 (76%), Gaps = 2/138 (1%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109
||||| | |||||| || || | ||| | |||||| || ||| || ||||| || || ||
Sbjct 172116177 CCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGA-ATATTGTAGTCAGA 172116119
Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169
| ||| | | ||| || | || || |||||||| |||| ||| |||||||| |||||
Sbjct 172116118 CAAAGTACGTCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGG 172116059
Query 146170 AATTCCTTCTTTATCTTG 146187
||||||||| ||||| ||
Sbjct 172116058 AATTCCTTCCTTATCCTG 172116041
>seq773
Length=81384781
Score = 89.7 bits (98), Expect = 8e-13
Identities = 104/138 (75%), Gaps = 2/138 (1%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109
||||| | |||||| || || ||||| |||||| || ||| || |||| || || ||
Sbjct 51769183 CCACCACGAAGTCTCAACACAAAATGAGGAGTAGACTCCTTTTGAC-TATTGTAGTCAGA 51769241
Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169
| ||| | | ||| || | || || |||||||| |||| ||| |||||||| |||||
Sbjct 51769242 CAAAGTACATCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGG 51769301
Query 146170 AATTCCTTCTTTATCTTG 146187
||||||||| ||||| ||
Sbjct 51769302 AATTCCTTCCTTATCCTG 51769319
>seq931
Length=156331669
Score = 86.0 bits (94), Expect = 9e-12
Identities = 101/134 (75%), Gaps = 2/134 (1%)
Strand=Plus/Minus
Query 146052 CACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGAA 146110
|||| | |||||| || || | ||| | ||||| || ||| || || || | || ||
Sbjct 3273478 CACCACAAAGTCTCAACACAAGATGAAGAGTAGGCTCCTTTTGA-ATGTTGCAGTCAGAC 3273420
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| ||| | | ||| || | ||| || |||||||| |||| |||||||||||| ||||||
Sbjct 3273419 AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGA 3273360
Query 146171 ATTCCTTCTTTATC 146184
|||||||| |||||
Sbjct 3273359 ATTCCTTCCTTATC 3273346
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 743148028709120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |