Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gorilla_20gorilla_20gorilla_20[refseq_20GCF_5F000151905.2_202014-12-
19] 40,711 sequences; 3,063,362,794 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq638 111 1e-19
seq168 109 5e-19
seq646 107 2e-18
seq1 104 2e-17
seq219 93.3 4e-14
seq885 91.5 1e-13
seq786 82.4 7e-11
>seq638
Length=135235416
Score = 111 bits (122), Expect = 1e-19
Identities = 114/149 (77%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 23048 ACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTG 23107
||||| |||||| |||||||| || ||||| || || || ||||| || || || ||
Sbjct 3886902 ACCTCATCTTTGCTGGTGTACTCCACTATTTCTGTGCACAGGTTGCTGCATTTGATGGTT 3886843
Query 23108 CCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTG 23167
|||| || ||||||||| || ||||| || ||||| ||||||||||| ||||| |||
Sbjct 3886842 CCCAGGTTCTGCTGGTTGCTCTTCCGATTACAGGAATCTTTGTAGAGCATATACGGGGTG 3886783
Query 23168 CCCGTCTCGACCTGCGACTCGATGATCGC 23196
|| || || ||| ||||| ||||| ||
Sbjct 3886782 CCTGTTTCCGTCTGAGACTCAATGATGGC 3886754
>seq168
Length=201391403
Score = 109 bits (120), Expect = 5e-19
Identities = 159/222 (72%), Gaps = 2/222 (1%)
Strand=Plus/Plus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| ||||| |||||||| || || || || || || || |||||| |||| ||||||||
Sbjct 5653671 AAAATGCAGATTTTCGTGAAAACCCTTACGGGAAAGACCATCACCCTCGAGGTTGAACCC 5653730
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
|| || | | |||| || || | ||| ||| |||||||| | || || ||
Sbjct 5653731 TCGGATACGATAGAAAATGTAAAGGCCAAGATACAGGATAAGGAAGGAATTCCTCCTGAT 5653790
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTA 31368
|||||| | || || || |||||||| ||| ||||||| | | | ||| || || ||
Sbjct 5653791 CAGCAGAGACTGATCTTTGCTGGCAAGCAGCTGGAAGA-TGGACGTACTTTGTCTGACTA 5653849
Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410
|| |||||||| || || ||||||||||| || | |||||
Sbjct 5653850 CAATATTCAAAAGGAGTCTACTCTTCATCTTGTGTTGAGACT 5653891
>seq646
Length=133456746
Score = 107 bits (118), Expect = 2e-18
Identities = 165/230 (72%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| ||||| ||||| ||||| || |||||| |||| || || ||
Sbjct 124982252 ATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTGGAGCCCAGT 124982193
Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|||| |||| | ||||| || ||| | |||||||||||| | || || |||||
Sbjct 124982192 GACACCATCGAGAATGTCAAGGCAAAGA-TCCAAGACAAGGAAGGCATCCCTCCTGACCA 124982134
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATA 31370
|||| | |||| || ||||| |||||| ||||||| | | | || || || || |
Sbjct 124982133 GCAGAGGTTAATCTTTGCTGGGAAACAGCTGGAAGA-TGGACGCACCCTGTCTGACTACA 124982075
Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420
|||| || ||||| || ||||| || |||| || | ||||||| |||
Sbjct 124982074 ACATCCAGAAAGAGTCCACTCTGCACTTGGTCCTGCGCTTGAGGGGGGGT 124982025
Score = 98.7 bits (108), Expect = 9e-16
Identities = 151/213 (71%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| ||||||||||| || || || |||||| |||| || || ||
Sbjct 124983164 ATGCAGATCTTCGTGAAGACTCTGACTGGTAAGACCATCACCCTCGAGGTCGAGCCCAGT 124983105
Query 31253 GACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|||| |||| | ||||| || || || || ||||||||| | || || |||||
Sbjct 124983104 GACACCATCGAGAATGTCAAGGCAAAG-ATCCAAGATAAGGAAGGCATCCCTCCTGACCA 124983046
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
|||| | || || || ||||| |||||| ||||||| || || ||||| ||
Sbjct 124983045 GCAGAGGCTGATCTTTGCTGGAAAACAGCTGGAAGATGGGCGCACCCTGTCTGATTACAA 124982986
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
||| || ||||| || || || || ||||| ||
Sbjct 124982985 CATCCAGAAAGAGTCTACCCTGCACCTGGTGCT 124982953
Score = 84.2 bits (92), Expect = 2e-11
Identities = 150/214 (70%), Gaps = 4/214 (2%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| ||||| ||||| || || || |||||| |||| || || ||
Sbjct 124982480 ATGCAGATCTTCGTGAAGACCCTGACTGGTAAGACCATCACCCTCGAGGTCGAGCCCAGT 124982421
Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|||| |||| | ||||| || ||| | |||||||||||| | || || |||||
Sbjct 124982420 GACACCATCGAGAACGTCAAGGCAAAGA-TCCAAGACAAGGAAGGCATCCCTCCTGACCA 124982362
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATA 31370
|||| | | || || || || || ||| ||||||| | | | || || || || |
Sbjct 124982361 GCAGAGGTTGATCTTTGCCGGAAAGCAGCTGGAAGA-TGGACGCACCCTGTCTGACTACA 124982303
Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
|||| || ||||| || || || || ||||| ||
Sbjct 124982302 ACATCCAGAAAGAGTCTACCCTGCACCTGGTGCT 124982269
>seq1
Length=228908639
Score = 104 bits (114), Expect = 2e-17
Identities = 159/224 (71%), Gaps = 2/224 (1%)
Strand=Plus/Plus
Query 31188 CAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAAC 31247
|||| ||||| |||||||| || || || || || || || |||||| |||| | |||||
Sbjct 172115946 CAAAAATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGCTGAAC 172116005
Query 31248 CGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCG 31307
| || || | | |||| || || | || ||| |||||||| | || || |
Sbjct 172116006 CCTCGGATACGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTG 172116065
Query 31308 ACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGAT 31366
| |||||| | || || || |||||||| ||| ||||||| | | | ||| || ||
Sbjct 172116066 ATCAGCAGAGACTGATCTTTGCTGGCAAGCAGCTGGAAGA-TGGACGTACTTTGTCTGAC 172116124
Query 31367 TATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410
|| || |||||||| || || ||||||||||| || | |||||
Sbjct 172116125 TACAATATTCAAAAGGAGTCTACTCTTCATCTTGTGTTGAGACT 172116168
Score = 89.7 bits (98), Expect = 5e-13
Identities = 154/218 (71%), Gaps = 7/218 (3%)
Strand=Plus/Minus
Query 31187 TCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAA 31246
||||| ||||| || ||||| ||||| ||||| ||||| || |||||| |||| || ||
Sbjct 197684220 TCAAA-ATGCAGATCTTCGTGAAGACGCTGACTGGCAAGACCATCACCCTCGAGGTGGAG 197684162
Query 31247 CCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGC--GGACAAGGAAGGCGTGCCGC 31304
|| |||| |||||| || || | |||| | ||| ||||||||| | | |
Sbjct 197684161 CCCAGTGACACCATCGAAAATGTGAAG--GCCAATATCCTGGATAAGGAAGGCATCCTTC 197684104
Query 31305 CCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGC 31363
||||||||||| | || || || || |||| ||| | ||||| | || ||| |
Sbjct 197684103 CCGACCAGCAGAGGCTCATCTTTGCAGGCATGCAGCTAGAAGA-TGGCTGCACTCTTTCT 197684045
Query 31364 GATTATAACATTCAAAAAGAATCGACTCTTCATCTGGT 31401
|| || ||||| || ||||| ||||| || | |||||
Sbjct 197684044 GACTACAACATCCAGAAAGAGTCGACCCTGTACCTGGT 197684007
>seq219
Length=165317712
Score = 93.3 bits (102), Expect = 4e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| ||||| ||||| ||||| || |||||| | || || || ||
Sbjct 62366805 ATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTGGAAGTGGAGCCCAGT 62366746
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||||| || || | || ||| || |||||| | || |||||||||
Sbjct 62366745 GACACCATCGAAAATGTGAAGGCCAAGATCCAGGATAAAGAAGGCATCCCTCCCGACCAG 62366686
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||| | || || || || ||||| ||| ||||||| ||| | || || |||
Sbjct 62366685 CAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGACTACAAC 62366626
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|| || || || ||||| || || ||||| || | ||||| || ||||
Sbjct 62366625 ATCCAGAAGGAGTCGACCCTGCACCTGGTCCTGCGTCTGAGAGGTGGTA 62366577
Score = 91.5 bits (100), Expect = 1e-13
Identities = 162/235 (69%), Gaps = 1/235 (0%)
Strand=Plus/Minus
Query 31187 TCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAA 31246
||||| ||||| || ||||| || || || || ||||| || |||||| | || || ||
Sbjct 62367038 TCAAA-ATGCAGATCTTCGTGAAAACCCTTACCGGCAAGACCATCACCCTTGAGGTGGAG 62366980
Query 31247 CCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCC 31306
|| |||| |||||| || || | || ||| ||||||||| | || |||
Sbjct 62366979 CCCAGTGACACCATCGAAAATGTGAAGGCCAAGATCCAGGATAAGGAAGGCATTCCCCCC 62366920
Query 31307 GACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGAT 31366
||||||||| | || || || || ||||| ||| ||||||| ||| | ||
Sbjct 62366919 GACCAGCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGAC 62366860
Query 31367 TATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|| ||||| || || || ||||| || || ||||| || | ||||| || ||||
Sbjct 62366859 TACAACATCCAGAAGGAGTCGACCCTGCACCTGGTCCTGCGTCTGAGAGGTGGTA 62366805
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| ||||| ||||| ||||| || ||||| | || || || ||
Sbjct 62366577 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACTCTGGAGGTGGAGCCCAGT 62366518
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||||| || || | || || || |||||| | || |||||||||
Sbjct 62366517 GACACCATCGAAAATGTGAAGGCCAAGATCCAAGATAAAGAAGGCATCCCTCCCGACCAG 62366458
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||| | || || || || ||||| ||| ||||||| ||| | || || |||
Sbjct 62366457 CAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGACTACAAC 62366398
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
|| || ||||| ||||| || || ||||| || | |||||||| ||
Sbjct 62366397 ATCCAGAAAGAGTCGACCCTGCACCTGGTCCTGCGCCTGAGGGGTGG 62366351
>seq885
Length=63231202
Score = 91.5 bits (100), Expect = 1e-13
Identities = 153/219 (70%), Gaps = 13/219 (6%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| |||||| | || || || ||||| ||||| |||||| || | |||||||| ||
Sbjct 35758838 ATGCAGATTTTCATGAAAACCCTTACAGGGAAAACCATCACCCTCAAGGTTGAACCCTCG 35758897
Query 31253 GACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|| | |||| || || || ||| | ||| ||||| || | || || || |
Sbjct 35758898 GATACCACAGAAAATGTAAAGACCAAGA-TCCAGGATAAGGACGGAATTCCTCCTGATCG 35758956
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
||| | |||||||| |||||||| || ||||||| || || || || ||
Sbjct 35758957 GCAAAGACTAATATTTGCTGGCAAGCAACTGGAAGA-----TGTCT------GACTACAA 35759005
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410
||||||||| || || ||||||||||| || | |||||
Sbjct 35759006 CATTCAAAAGGAGTCTACTCTTCATCTTGTGTTGAGACT 35759044
>seq786
Length=95888799
Score = 82.4 bits (90), Expect = 7e-11
Identities = 159/232 (69%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| ||||| |||||||| || || || || || || || | |||| || | ||||||||
Sbjct 10327746 AAAATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACAACCACCCTCAAGGTTGAACCA 10327805
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
| || | | |||| || || | || ||| |||||||| | || || ||
Sbjct 10327806 TTGGATACGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 10327865
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTA 31368
||||| | | || || |||||||| || ||||||| | ||| ||| || | ||
Sbjct 10327866 CAGCAAAGACCGATCTTTGCTGGCAAGCAACTGGAAGA-TGGATGTACTTTGTCTGGCTA 10327924
Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420
|| ||||||||||| || ||||||||| | || | |||||| | || |||
Sbjct 10327925 CAATATTCAAAAAGAGTCTACTCTTCATTTTGTGTTGAGACTGCGTGGTGGT 10327976
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445539555051120
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