Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gorilla_20gorilla_20gorilla_20[refseq_20GCF_5F000151905.2_202014-12-
19] 40,711 sequences; 3,063,362,794 total letters
Query= NC_003401.1
Length=133719
Score E
Sequences producing significant alignments: (Bits) Value
seq848 138 1e-27
seq168 111 1e-19
>seq848
Length=78004504
Score = 138 bits (152), Expect = 1e-27
Identities = 129/164 (79%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 20989 TCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACG 21048
|||||||||||| ||| || |||| || || || |||||||||||||||||||| || |
Sbjct 14422031 TCAGGCCCGTGATGTGTGCAATCATGTATGTGAGCAGGGCGTAGCTGGCGATGTTGAAAG 14422090
Query 21049 GGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAG 21108
| || |||||||||||||| | || |||||||||||||||||||||||||| |
Sbjct 14422091 GCACACCGAGGCCCATGTCTCCCGATCTCTGGTACAGCTGGCAGGACAGCTCACTGTTCA 14422150
Query 21109 CCACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATC 21152
|||| || ||||| || | | || || ||||| || ||||||
Sbjct 14422151 CCACATAGAACTGGCAGAGGGCATGGCATGGAGGCAGCGCCATC 14422194
>seq168
Length=201391403
Score = 111 bits (122), Expect = 1e-19
Identities = 193/281 (69%), Gaps = 0/281 (0%)
Strand=Plus/Plus
Query 2963 TTAAACGCATCGTCTAGCGTTCTCGCTAGAAAGTGTGCTCCGTGCGGTGGTTCACGTAAT 3022
|| || ||||| || | |||| || ||||| || ||||| || || ||||| | |
Sbjct 95260020 TTTAAGGCATCATCCAAACTTCTGGCAAGAAAATGAGCTCCTTGTGGAGGTTCCTTGAGT 95260079
Query 3023 TCTCTGCTCAAAATAATATTAATTCTGTTCACCAGAGGGCGCTTCTTTTCAGGGATGGAA 3082
|||||||| | || | ||||||||| | | | ||| || ||||| ||||| |||||
Sbjct 95260080 TCTCTGCTGAGAACTAAATTAATTCTATCCTTTAAAGGTCGATTCTTCTCAGGAATGGAG 95260139
Query 3083 AACCATGTTCTTTTCCCCATAATAACCACATTCTTTTCACCTACAACCGATGGCGTAGAC 3142
||||| || | | |||||||| |||| ||||| || ||| | || || | || |
Sbjct 95260140 AACCAGGTCTTCCTACCCATAATCACCAGATTCTGTTTACCCTCTACTGAAGAAGTTGTG 95260199
Query 3143 GTCATTTTCTGAAAATACATCATTTCGTTTCTAAGGTACGGCCAAGGCATTGTTCCGTTT 3202
|||||| |||| |||||| | | ||| || || || ||||| |||| |||||
Sbjct 95260200 GTCATTCTCTGGAAATACCTGAATTCATTCCTGAGTGGCGGCCTGGGCAGGTCCCCGTTC 95260259
Query 3203 TTACCAATTCCTAATTGTTCATCAACTGCAACGATGCAGTT 3243
|| || || || | | || || || |||||||||||
Sbjct 95260260 TTGCCGATGCCCATGTTTTGGGACACAGCGACGATGCAGTT 95260300
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427563752387280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |