Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gorilla_20gorilla_20gorilla_20[refseq_20GCF_5F000151905.2_202014-12-
19] 40,711 sequences; 3,063,362,794 total letters
Query= NC_003494.1
Length=111362
Score E
Sequences producing significant alignments: (Bits) Value
seq931 127 1e-24
>seq931
Length=156331669
Score = 127 bits (140), Expect = 1e-24
Identities = 396/598 (66%), Gaps = 44/598 (7%)
Strand=Plus/Minus
Query 22345 ATGTACAAGAAGGCCGTTGCGTCTTTTTGGACCGTTGAGGAGGTGGATCTTAGTACTGAT 22404
||||| |||||||| | || || || |||||| ||||||||||| || | ||
Sbjct 44830852 ATGTATAAGAAGGCGGAGGCTTCCTTCTGGACCACCGAGGAGGTGGACCTGTCCAAGGAC 44830793
Query 22405 GTACGCCATTGGACAGAAAAACTGA---CCGAGGCTGAGCGCAGGTTCATGTCTCACATA 22461
| || || ||| ||| |||| |||||| || | || || || || |
Sbjct 44830792 ATTCGGCACTGG---GAACCCCTGAAGCCCGAGG---AGAGATATTTTATATCCCATGTT 44830739
Query 22462 CTGGCATTCTTTGCAATGGCA---GATGGCATTGTAGGCGACAACCTTGTGT-GCAATTT 22517
|||| ||||||||| ||| |||||||| ||| || || | ||| || ||||
Sbjct 44830738 CTGGTTTTCTTTGCA---GCAAGTGATGGCATAGTAAATGAAAATTTGGTGGAGCGATTT 44830682
Query 22518 CGCAAAAGAACTTGACTATATTCCAGAAGCCAGAGCTTTCTATGGGTTTCAGGTGGCAAT 22577
|| ||| | | | ||| |||||||| | ||||||||| || || | || ||
Sbjct 44830681 AGCCAAATAGTTC----AGATTACAGAAGCCCGCTGTTTCTATGGCTTCCAAATTGCCAT 44830626
Query 22578 GGAAAATATACATGCTGAAATGTATACTCAGCTGATTATCACATTAGTAGCTAAAGAG-- 22635
|||||| |||||| |||||||||||| || || ||| ||| ||| | | |||||
Sbjct 44830625 GGAAAACATACATTCTGAAATGTATAGTCTCCTTATTGACAC-TTAC-ATC-AAAGATCT 44830569
Query 22636 --AATCAAGCCGCATTGTTTTCA--GCAGCTGAAGATATGCCATGTGTTAAAGCCAAGGC 22691
|| ||| || | |||| || |||| ||||| ||||| || |||||
Sbjct 44830568 CAAAGAAAGGGAATTTCTCTTCAATGCCATTGAACG-ATGCCTTGTGTCAAGAAGAAGGC 44830510
Query 22692 ACAGTGGGC--TGCACAATGGCTGAAT--GCCACACATAAGT---CTATCGCAACACGTC 22744
| | ||||| ||| |||| || | ||| | | | |||| | | || |
Sbjct 44830509 AGATTGGGCCTTGC------GCTGGATTGGGGACAAAGAGGCTACCTATGGTGA-ACATG 44830457
Query 22745 TCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCT 22804
| | ||||| || || || |||||| || | |||||||| || ||||| | |||||||
Sbjct 44830456 TTGTAGCCTTCGCTGCAGTAGAAGGCATCTTCTTTTCTGGTTCTTTTGCATCGATATTCT 44830397
Query 22805 GGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTG 22864
|||| |||||||| | ||||| || | |||||||||| || | |||||| | |
Sbjct 44830396 GGCTCAAGAAACGAGGACCGATGCCTGGCCTCACGTTTTCCAATGAACTTATTAGCAGAG 44830337
Query 22865 ACGAAGGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAAACC 22922
| || ||| |||||||||| |||||||| || |||| | || ||| | |||||||
Sbjct 44830336 ATGAGGGTTTACACTGTGATTTTGCTTGCTTGATGTTCAAACACCTGGTACACAAACC 44830279
Score = 84.2 bits (92), Expect = 2e-11
Identities = 88/116 (76%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 22777 TTTTCTGGGTCATTTGCGGCCATATTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTG 22836
|||||||| || ||||| ||||||||||| ||||||| || ||||| || |
Sbjct 144506081 TTTTCTGGTTCTTTTGCACTGATATTCTGGCTCAAGAAACAAGGACTGATGCCTGGCCTC 144506140
Query 22837 GCGTTTTCCAACGAGTTGATTAGCCGTGACGAAGGTCTACACTGTGACTTTGCTTG 22892
| |||||||| || | |||||| |||| || ||| |||||||| ||||||||||
Sbjct 144506141 ACATTTTCCAATGAACTTATTAGCAGTGATGAGGGTTTACACTGTTACTTTGCTTG 144506196
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 356056849244533
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |