Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gorilla_20gorilla_20gorilla_20[refseq_20GCF_5F000151905.2_202014-12- 19] 40,711 sequences; 3,063,362,794 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq931 154 2e-32 >seq931 Length=156331669 Score = 154 bits (170), Expect = 2e-32 Identities = 497/759 (65%), Gaps = 27/759 (4%) Strand=Plus/Minus Query 124998 TTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGG 125057 || |||||| ||| ||||| || ||| | ||||| || ||||| |||| ||||| ||| Sbjct 44830882 TTCCCCATCGAGTACCATGATATCTGGCAGATGTATAAGAAGGCGGAGGCTTCCTTCTGG 44830823 Query 125058 ACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAA 125117 || ||| ||||| || |||||||||||| | | ||||| || | ||||| Sbjct 44830822 ACCACCGAGGAGGTGGACCTGTCCAAGGACATTCGGCACTGGGA-ACCC------CTGAA 44830770 Query 125118 AC----TGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAAT 125173 | ||| || | |||||||| || || ||| |||||||| | ||||| || Sbjct 44830769 GCCCGAGGAGAGATATTTTATATCCCATGTTCTGGTTTTCTTTGCAGCAAGTGATGGCAT 44830710 Query 125174 CGTCAACGACAATCTGTTGACACGA-TTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGT 125232 || || || ||| || || ||| || | || |||| | ||| |||| | | Sbjct 44830709 AGTAAATGAAAATTTGGTGGAGCGATTTAGCCAAATAGTTCA-GATTACAGAAGCCCGCT 44830651 Query 125233 GCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGA 125292 | || || || |||||||| || || ||| | || || |||||||| | || | Sbjct 44830650 GTTTCTATGGCTTCCAAATTGCCATGGAAAACATACATTCTGAAATGTATAGTCTCCTTA 44830591 Query 125293 TTGACATGTACATTCGCGATCCGCAACGTAA-ACACATGCTCTTTAACGCAATCGACACG 125351 |||||| ||||| ||| | ||| | || | | ||||| || || || || ||| Sbjct 44830590 TTGACACTTACATCAAAGAT-CTCAAAGAAAGGGAATTTCTCTTCAATGCCATTGA-ACG 44830533 Query 125352 GTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCT 125411 |||| | | | || ||||| | |||| | || ||||| | ||| | || || Sbjct 44830532 ATGCCTTGTGTCAAGAAGAAGGCAGATTGGGCCTTGCGCTGGATTGGGGACAAAGAGGCT 44830473 Query 125412 TCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGT 125471 | || | || | || || ||||| || ||||| |||||||||||||| ||| | Sbjct 44830472 ACCTATGGTGAACATGTTGTAGCCTTCGCTGCAGTAGAAGGCATCTTCTTTTCTGGTTCT 44830413 Query 125472 TTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAAC 125531 ||||| | || || ||||||||||| || |||| ||||| || || ||| || Sbjct 44830412 TTTGCATCGATATTCTGGCTCAAGAAACGAGGACCGATGCCTGGCCTCACGTTTTCCAAT 44830353 Query 125532 GAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAAC 125591 || |||| |||| ||||| |||||||||| |||| | | || || | ||| Sbjct 44830352 GAACTTATTAGCAGAGATGAGGGTTTACACTGTGATTTTG-CTTGCT--TGATGTTCAAA 44830296 Query 125592 TATCTGCGTCCCGAGTGCAGATCCAGC-GATGAAAAGGTCATCAACATTGTAACCGATGC 125650 | ||| || | | | ||| | || || || || | | || | | | |||| Sbjct 44830295 CACCTG-GTACACA------AACCATCGGAGGAGAAAGTGAGAGAAATAATTATCAATGC 44830243 Query 125651 CGTGAGGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAA 125710 || |||||||||||| || || ||||| || | || || | | ||||| ||||| Sbjct 44830242 TGTTCAGATAGAACAAGAATTCCTCACCGAGGCCTTGCCTGTGAAGCTCATTGGGATGAA 44830183 Query 125711 CTGCAAGCTAATGTGCGAGTACATAGAGTTTGTGGCAGA 125749 |||| |||||| | ||||| |||||||||||||| Sbjct 44830182 TTGCACTCTAATGAAGCAATACATTGAGTTTGTGGCAGA 44830144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740682084236360