Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gorilla_20gorilla_20gorilla_20[refseq_20GCF_5F000151905.2_202014-12-
19] 40,711 sequences; 3,063,362,794 total letters
Query= NC_005038.1
Length=99657
Score E
Sequences producing significant alignments: (Bits) Value
seq168 104 1e-17
seq786 89.7 3e-13
>seq168
Length=201391403
Score = 104 bits (114), Expect = 1e-17
Identities = 155/219 (71%), Gaps = 6/219 (3%)
Strand=Plus/Minus
Query 33157 CAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTC 33216
|||||| | ||| | || ||||| ||||| |||||||| ||||||||| | || ||
Sbjct 5653886 CAACACAAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGACAAAGTACGTCCATC 5653827
Query 33217 ATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTC 33276
|||| ||||| ||| ||| || | | ||||| || | || || ||||| || ||
Sbjct 5653826 TTCCAGCTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATC 5653767
Query 33277 GCTAATC---GCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTAT 33333
||| |||| |||| ||| ||||| || ||||| ||| || || || ||
Sbjct 5653766 CTGTATCTTGGCCT---TTACATTTTCTATCGTATCCGAGGGTTCAACCTCGAGGGTGAT 5653710
Query 33334 CGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTT 33372
|| ||||||||||| ||||| |||||||| ||||| ||
Sbjct 5653709 GGTCTTTCCCGTAAGGGTTTTCACGAAAATCTGCATTTT 5653671
>seq786
Length=95888799
Score = 89.7 bits (98), Expect = 3e-13
Identities = 152/219 (69%), Gaps = 6/219 (3%)
Strand=Plus/Minus
Query 33157 CAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTC 33216
|||||| ||||| | || ||||||||||| |||||||| |||||||| | | ||
Sbjct 10327961 CAACACAAAATGAAGAGTAGACTCTTTTTGAATATTGTAGCCAGACAAAGTACATCCATC 10327902
Query 33217 ATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTC 33276
|||| |||||| ||| ||| || | |||||| || | || || ||||| || ||
Sbjct 10327901 TTCCAGTTGCTTGCCAGCAAAGATCGGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATC 10327842
Query 33277 ---GCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTAT 33333
| | | ||| ||||| ||| ||||| || |||| ||| | || || |
Sbjct 10327841 CTGGATCTTGGCC---TTTACATTTTCTATCGTATCCAATGGTTCAACCTTGAGGGTGGT 10327785
Query 33334 CGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTT 33372
|| || |||||||| ||||| |||||||| ||||| ||
Sbjct 10327784 TGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTT 10327746
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 318619433612478
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |