Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gorilla_20gorilla_20gorilla_20[refseq_20GCF_5F000151905.2_202014-12-
19] 40,711 sequences; 3,063,362,794 total letters
Query= NC_005069.1
Length=46339
Score E
Sequences producing significant alignments: (Bits) Value
seq24626 219 1e-52
>seq24626
Length=2868
Score = 219 bits (242), Expect = 1e-52
Identities = 634/971 (65%), Gaps = 16/971 (2%)
Strand=Plus/Plus
Query 22416 CGTTGGTTAGCGGCTTGTTCGAACACAGTTCGCATACGAACTTGTCCTTTACCTACTTCG 22475
||||| | | ||| ||||| || ||||||| ||| || | || |||||||| |||||
Sbjct 12 CGTTGATCAATGGCCTGTTCAAAAACAGTTCTCATCCGGATCTGACCTTTACCAACTTCA 71
Query 22476 TCAGTTACTCGAACAACTTCTTTAAGGACCATGCTGCCCCAAGCATCACGTATATGGTCA 22535
|| ||| | || ||||| | ||| || |||||||| ||||| ||||| || || || ||
Sbjct 72 TCCGTTTCACGTACAACATTTTTTAGAACCATGCTTCCCCAGGCATCCCGAATTTGCTCC 131
Query 22536 TCCATCCACTGAGATTGGCTACCAACAGCATTACTGAATTTAGTAATCAATACCCTAACA 22595
||||||||| | || || ||| | ||| ||| |||| |||| ||| | | |||
Sbjct 132 TCCATCCACGGGGACTGAGAGCCATTACTATTGCTGTATTTGGTAAGCAAAATACGTACA 191
Query 22596 TCAGGCTCAAACCCGCCGAGGTCCAC--TCCAGCCATAAGATCACGCAACATAGTGAAAA 22653
|||||||| ||||| || || || || | | |||||||| | |||| |||||
Sbjct 192 TCAGGCTCGAACCCTTTAAGATCAACGTTCTTG--AGCAGATCACGAAGCATATCGAAAA 249
Query 22654 ATTGCAATGTGCTGACATAGTCATAAAGTTCAGCTGGAGTTGGTACAACAATGACATCAG 22713
| |||| || | | |||||| | | ||||| || || || |||| | |||||||
Sbjct 250 ACTGCAGTGCGGAGGTGTAGTCAAACAACTCAGCAGGCGTGGGAACAATCAGCACATCAG 309
Query 22714 CGGCACAAACCACATTTATTGTGCCTATGCCCAAGTTAGGTGCACTGTCTAAAACAACTA 22773
| ||||| || ||||| || ||||| || |||| |||||| || ||||| | ||| | |
Sbjct 310 CAGCACATACGACATTAATCGTGCCGATACCCAGGTTAGGCGCGCTGTCAATAACTATGA 369
Query 22774 CGTCATAGCTGTCCCATACGGACTCGATTGCAGCACGTAGCATCATGTGCGGTGCTACAG 22833
| |||||| | || | || || || || ||||||| ||| || | |
Sbjct 370 CATCATAGTCATGAGCAACAGTTTCAATGGCCAGTCGGAGCATCAGGTGTGGATCGGTGG 429
Query 22834 GGAGCTTTTCGGCATCA----TGCAAAGGATATAATTCAGACTCAATTCGATGGATGGCC 22889
| || || | ||||| ||| | ||| |||| ||||| || || | |||
Sbjct 430 GCAGTTTACCTTCATCAAATTTGCCCA----TTAACTCAGTTTCAATACGGTGCAGAGCC 485
Query 22890 AGACAGGATGGGATTATGTCCAGATTTGGCCAACATGTTGGTTTGATGGCGTACATAGCA 22949
|||||||| || || ||||| || ||||| || || || || || || || | ||
Sbjct 486 AGACAGGAAGGAATAATGTCAAGCCCCGGCCAGCAAGTGGGCTTTATTGCATAAGTGACA 545
Query 22950 TCATCACGTTCACCTAAGTAATAAGGGAGTAGAGTTTCGTCTTCGTGGATATGCAAATCA 23009
|| || ||| || | || |||| || ||||| || ||| | || ||||| | |||
Sbjct 546 TCGTCCTTTTCCCCAAGATAGAAAGGCAGGAGAGTGTCTTCTGCATGAATATGAAGATCT 605
Query 23010 GGTACATACCCATGATAAAGGCTGGCGGTAGCTTGCGGATCTGTAGCATCAATCAATAGT 23069
||||| | || ||||| | ||| || | || || || || | || | | |
Sbjct 606 GGTACCCATCCGTGATACATTGAGGCTGTTCCCTGGGGGTCGTTACCTTCCACGAGCAAA 665
Query 23070 ACGCGTAAGCCCTGCAATGCTAACCATTGAGCTGTATGCACTGAGGTACT--TGTTTTGT 23127
|| |||| |||| || || | ||||| ||| || || ||| |||||||
Sbjct 666 ACACGTAGCCCCTTCAGAGCCAGATCCTGAGCAAGATGAAC--AGAAACTGAGGTTTTGT 723
Query 23128 ATGCGCCACCTTTATGTGCCGCTATAGCCAATACTACTGGGTCTTGCCCATCAGGTCGTT 23187
| |||| |||||||| || || | | | || ||| | | |||| |||
Sbjct 724 AAACGCCGCCTTTATGGGCAGCAACCCCGATCACCGGTGGAAATACGTCTTCAGCACGTC 783
Query 23188 TCCAGCGTGTACCAAAATGATCCCGAAGGTCGTTAATTTGTTGAATCGTATATCCCGCTC 23247
| | || |||||||| ||| || | | |||||||||| ||| ||||| || | |
Sbjct 784 GCAATCGCGTACCAAACACATCACGCATATGATTAATTTGTTCAATTGTATAACCAACAC 843
Query 23248 TTTGTGGCACTCTGCCACGTGTAACCATATCCGCAGGTGGCAATTTTCCTGAGTCCTCGC 23307
||| || | || || | ||||||||| | || | | |||| | ||||
Sbjct 844 GTTGCTCAACCCGTCCTCGAATTTCCATATCCGGGTGCGGTAGTCGCCCTGCTTTCTCGG 903
Query 23308 CATTGCGGATGGTCTGAGGGGTTACACCAACTAATTCTGCAGCTTCAGTAATACCCCATC 23367
||| | ||| | ||||| | || |||||||| || || |||||| || | ||| |
Sbjct 904 CATCTCTGATAGCCTGAGAAGAAACCCCAACTAAATCCGCTGCTTCACCTATTCTCCAGC 963
Query 23368 GACGAGTGATT 23378
| || || |||
Sbjct 964 GCCGGGTTATT 974
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 148091571519582
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |