Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gorilla_20gorilla_20gorilla_20[refseq_20GCF_5F000151905.2_202014-12- 19] 40,711 sequences; 3,063,362,794 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq848 100 2e-16 >seq848 Length=78004504 Score = 100 bits (110), Expect = 2e-16 Identities = 123/168 (73%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 25773 CATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTC 25832 ||| || |||| ||||| || |||| |||||||||||| || || || || || | ||| Sbjct 14428831 CATATCTCTGTATTCTGCCCCAAAATGCCTCCACTGGAAGCCATAAACTGGGCCCAAGTC 14428890 Query 25833 TCCATCTTCCCTGTGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTC 25892 || ||||| ||| || ||| | ||||||||||||| || |||||||| || Sbjct 14428891 CCCTTCTTCTCTGGTGGAGAATCCCAGGCTGTCCAAAAAGTCTCGAGATCCATTGGCATC 14428950 Query 25893 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 25940 |||||| || || ||||| || |||||||| | |||||||| || Sbjct 14428951 CCAGATTTTCACTCCCTTGGAAGACAGCTCTTTAGCATTTGTGGATCC 14428998 Score = 91.5 bits (100), Expect = 1e-13 Identities = 111/150 (74%), Gaps = 1/150 (1%) Strand=Plus/Plus Query 25506 GCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATG 25565 || |||||||| ||||| || ||||||||||||||| || || || |||| |||||| Sbjct 14422048 GCAATCATGTATGTGAGCAGGGCGTAGCTGGCGATGTTGAAAGGCACACCGAGGCCCATG 14422107 Query 25566 TCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCTCACGTAAAACTGACA 25625 | | ||||| |||||||| ||||| || || ||||| || ||| || ||||| || Sbjct 14422108 T-CTCCCGATCTCTGGTACAGCTGGCAGGACAGCTCACTGTTCACCACATAGAACTGGCA 14422166 Query 25626 CATGGTGTAGCACGGAGGAAGAGCTATAAG 25655 | || | ||| ||||| || || || || Sbjct 14422167 GAGGGCATGGCATGGAGGCAGCGCCATCAG 14422196 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 339968835521403