Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gorilla_20gorilla_20gorilla_20[refseq_20GCF_5F000151905.2_202014-12-
19] 40,711 sequences; 3,063,362,794 total letters
Query= NC_005857.1
Length=51601
Score E
Sequences producing significant alignments: (Bits) Value
seq24626 354 3e-93
>seq24626
Length=2868
Score = 354 bits (392), Expect = 3e-93
Identities = 703/1036 (68%), Gaps = 10/1036 (1%)
Strand=Plus/Plus
Query 27559 GAGCGCTGATAAGCAGCCTGCTCAAATACCGTACGCATTTTTATTTGGCCCTTTCCTACT 27618
||||| |||| | ||||| ||||| || || | ||| || || || || || |||
Sbjct 9 GAGCGTTGATCAATGGCCTGTTCAAAAACAGTTCTCATCCGGATCTGACCTTTACCAACT 68
Query 27619 TCATCTGTCACCCTGACAACTTGACGCAGAACCATCGACCCCCACGTATTTCTTATCTGC 27678
||||| || | | ||||| | |||||||| ||||| | || | || |||
Sbjct 69 TCATCCGTTTCACGTACAACATTTTTTAGAACCATGCTTCCCCAGGCATCCCGAATTTGC 128
Query 27679 TCTTCCATCCAGCGCGACTGATTACCAGTAGTCAGGCTGTATTTGGTTAGCAGCAGTCGT 27738
|| |||||||| | |||||| ||| || | |||||||||||| |||| | |||
Sbjct 129 TCCTCCATCCACGGGGACTGAGAGCCATTACTATTGCTGTATTTGGTAAGCAAAATACGT 188
Query 27739 ACCACCGGCTCGAAACCGCCTAAATCAACGGTTTTTAGTAGGTCCAGAAGCATGGTGAAG 27798
|| | |||||||| || | ||||||| | || || || || ||||||| |||
Sbjct 189 ACATCAGGCTCGAACCCTTTAAGATCAACGTTCTTGAGCAGATCACGAAGCATATCGAAA 248
Query 27799 AACTGCAGAACGGATGAATAATCAAATAGCTCTGCAGGGGTAGCTACGACAATAATATCG 27858
|||||||| |||| | || ||||| | ||| ||||| || | || | | | |||
Sbjct 249 AACTGCAGTGCGGAGGTGTAGTCAAACAACTCAGCAGGCGTGGGAACAATCAGCACATCA 308
Query 27859 GCAGCACAAACAACATTAATCGTCCCTGTTCCGAGGTTAGGAGCGCTATCAATAACGATA 27918
|||||||| || ||||||||||| || | || |||||||| ||||| |||||||| ||
Sbjct 309 GCAGCACATACGACATTAATCGTGCCGATACCCAGGTTAGGCGCGCTGTCAATAACTATG 368
Query 27919 ATGTCATAGTTATCCCATACGGATTCTATAGCAGCCCGTAGCATCAGGTGAGG--CGGAT 27976
| ||||||| || || | ||| || || || ||||||||||| || ||| |
Sbjct 369 ACATCATAGTCATGAGCAACAGTTTCAATGGCCAGTCGGAGCATCAGGTGTGGATCGG-T 427
Query 27977 GAGGTAGTTTTCCTTGGGCGTGGTATT---GCATCAGGTCCGTTTCGATACGGTGAAGCG 28033
| || ||||| |||| | | ||| ||| | || ||||| |||||||| || |
Sbjct 428 G-GGCAGTTTACCTT---CATCAAATTTGCCCATTAACTCAGTTTCAATACGGTGCAGAG 483
Query 28034 CCAAGCAGCTGGGGATAATGTCCAGACCTGGCCAGCAGGTCGGCTTTATAGCGTATTCCG 28093
||| ||| || |||||||| || || |||||||| || |||||||| || ||
Sbjct 484 CCAGACAGGAAGGAATAATGTCAAGCCCCGGCCAGCAAGTGGGCTTTATTGCATAAGTGA 543
Query 28094 CATTATCACGCTCACCAAGGTAAAACGGGAGCAAAGTATCATCGGCGTGAATGTGCAAAT 28153
||| || || ||||| || || || || | ||| || || || ||||| || | ||
Sbjct 544 CATCGTCCTTTTCCCCAAGATAGAAAGGCAGGAGAGTGTCTTCTGCATGAATATGAAGAT 603
Query 28154 CAGGCACATAGCCATGATACATAGAGGCGGTTCCCTGCGGATCATTACCTTCAATGAGTA 28213
| || || | || |||||||| ||||| |||||||| || || |||||||| | ||| |
Sbjct 604 CTGGTACCCATCCGTGATACATTGAGGCTGTTCCCTGGGGGTCGTTACCTTCCACGAGCA 663
Query 28214 GAACTCGGTGACCCTGTAAGGCTAACCATTGAGCTTCATGTACTGCAGATGAGGTTTTAT 28273
||| || | |||| | || | ||||| ||| || | | ||||||||| |
Sbjct 664 AAACACGTAGCCCCTTCAGAGCCAGATCCTGAGCAAGATGAACAGAAACTGAGGTTTTGT 723
Query 28274 AAACGCCACCTTTGTGTGACATAACAGCTAAAACGGCTGGATTTTTATCGGCTGGCCGTT 28333
||||||| ||||| || | ||| | | || | |||| | || | | |||
Sbjct 724 AAACGCCGCCTTTATGGGCAGCAACCCCGATCACCGGTGGAAATACGTCTTCAGCACGTC 783
Query 28334 GATTAGGATTACCGAAAATGTTCCGCATATGGCTAATTTGGTCGATGGTATAGCCAGCAC 28393
| | |||| || | | |||||||| ||||||| || || ||||| ||| |||
Sbjct 784 GCAATCGCGTACCAAACACATCACGCATATGATTAATTTGTTCAATTGTATAACCAACAC 843
Query 28394 GACGTTCGACGCGGCCACGCAATTCAAAATCAGGTGGCGGTAACCGCCCATTCTTCTCAG 28453
| | || || || || || | ||| | ||| || |||||| ||||| ||||| |
Sbjct 844 GTTGCTCAACCCGTCCTCGAATTTCCATATCCGGGTGCGGTAGTCGCCCTGCTTTCTCGG 903
Query 28454 CATCTCTAATCGCTTGCGGTGAAACACCGATTAAATCAGCAACCTCGGTTATCCCCCAGC 28513
||||||| || || || | ||||| || | |||||| || | || ||| | |||||
Sbjct 904 CATCTCTGATAGCCTGAGAAGAAACCCCAACTAAATCCGCTGCTTCACCTATTCTCCAGC 963
Query 28514 GACGAGTAATCTTACGTGCTTCAGGGCTATCATCACCAAATTGCGCTATGGCAATGGCTT 28573
| || || || || | ||||| ||||| |||||| ||| || || ||||| || || |
Sbjct 964 GCCGGGTTATTTTCCTCGCTTCCGGGCTGTCATCATTAAACTGTGCAATGGCGATAGCCT 1023
Query 28574 GCGTCATCTCTTGTCC 28589
|||||| || || ||
Sbjct 1024 TCGTCATTTCATGACC 1039
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 164921831110866
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |