Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gorilla_20gorilla_20gorilla_20[refseq_20GCF_5F000151905.2_202014-12-
19] 40,711 sequences; 3,063,362,794 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq931 102 2e-16
seq638 100 7e-16
seq39 95.1 3e-14
>seq931
Length=156331669
Score = 102 bits (112), Expect = 2e-16
Identities = 150/212 (71%), Gaps = 3/212 (1%)
Strand=Plus/Minus
Query 22435 AAGAATAAGGCAGATTGGGCGCTGAAATGGAT---GAACAATGAACGTTCATTCGCGGAA 22491
||||| |||||||||||||| || ||||| | |||| || | | | | |||
Sbjct 44830520 AAGAAGAAGGCAGATTGGGCCTTGCGCTGGATTGGGGACAAAGAGGCTACCTATGGTGAA 44830461
Query 22492 CGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATC 22551
| | || | || || |||| || |||||||| ||||||||||| | ||| | ||
Sbjct 44830460 CATGTTGTAGCCTTCGCTGCAGTAGAAGGCATCTTCTTTTCTGGTTCTTTTGCATCGATA 44830401
Query 22552 TTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGC 22611
|| ||||| || ||||| | | ||||| || || |||||||| ||||| | ||||||
Sbjct 44830400 TTCTGGCTCAAGAAACGAGGACCGATGCCTGGCCTCACGTTTTCCAATGAACTTATTAGC 44830341
Query 22612 CGAGATGAGGGTCTTCATACCGATTTTGCGTG 22643
||||||||||| | || |||||||| ||
Sbjct 44830340 AGAGATGAGGGTTTACACTGTGATTTTGCTTG 44830309
>seq638
Length=135235416
Score = 100 bits (110), Expect = 7e-16
Identities = 114/153 (75%), Gaps = 0/153 (0%)
Strand=Plus/Plus
Query 364111 GCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATG 364170
|| ||| |||| |||| ||||||||| || || |||| || ||||| || || ||||||
Sbjct 3886736 GCTCAGCAGCTTTGGTATGCCATCATTGAGTCTCAGACGGAAACAGGCACCCCGTATATG 3886795
Query 364171 TTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG 364230
| ||||||||||| || || || ||| |||||||||| |||| || || || |
Sbjct 3886796 CTCTACAAAGATTCCTGTAATCGGAAGAGCAACCAGCAGAACCTGGGAACCATCAAATGC 3886855
Query 364231 AGCAACCTATGTACCGAGATTATTGAATACACC 364263
|||||||| || || || || | || ||||||
Sbjct 3886856 AGCAACCTGTGCACAGAAATAGTGGAGTACACC 3886888
>seq39
Length=107640188
Score = 95.1 bits (104), Expect = 3e-14
Identities = 103/134 (77%), Gaps = 2/134 (1%)
Strand=Plus/Minus
Query 22489 GAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTG-C 22547
|||||| || | || ||||||| || ||||||||||||||||| || | ||||| | |
Sbjct 97368731 GAACGTGTTGTAGCCTTTGCTGCAGTGGAAGGCATTTTCTTTTCCGGTTC-TTTTGCGTC 97368673
Query 22548 AATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAAT 22607
|| || ||||| || ||||| | | | ||||| || || || ||||| ||||| | ||
Sbjct 97368672 GATATTCTGGCTCAAGAAACGAGGACTGATGCCCGGCCTCACATTTTCTAATGAACTTAT 97368613
Query 22608 TAGCCGAGATGAGG 22621
|||| |||||||||
Sbjct 97368612 TAGCAGAGATGAGG 97368599
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1302673758136002
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |