Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gorilla_20gorilla_20gorilla_20[refseq_20GCF_5F000151905.2_202014-12-
19] 40,711 sequences; 3,063,362,794 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq646 100 2e-16
seq168 82.4 7e-11
>seq646
Length=133456746
Score = 100 bits (110), Expect = 2e-16
Identities = 141/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049
|||||| | || || || || | ||||| || | || ||| |||| |||||| |||
Sbjct 124982481 AATGCAGATCTTCGTGAAGACCCTGACTGGTAAGACCATCACCCTCGAGGTCGAGCCCAG 124982422
Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109
|||||||||||| | ||||| |||||| ||||| |||||||| ||||| || ||
Sbjct 124982421 TGACACCATCGAGAACGTCAAGGCAAAGATCCAAGACAAGGAAGGCATCCCTCCTGACCA 124982362
Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169
||||| |||| | | ||| ||||| || ||||||| | | | | || || ||
Sbjct 124982361 GCAGAGGTTGATCTTTGCCGGAAAGCAGCTGGAAGATGGACGCACCCTGTCTGACTACAA 124982302
Query 24170 CATTCAAAAAGAATCTAC 24187
||| || ||||| |||||
Sbjct 124982301 CATCCAGAAAGAGTCTAC 124982284
Score = 100 bits (110), Expect = 2e-16
Identities = 151/214 (71%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 23974 CTTTTTAGCCAAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCA 24033
|||||| | || |||| |||| | || || || || | ||||| || | || |||
Sbjct 124983179 CTTTTTTGTCAGACAA--TGCAGATCTTCGTGAAGACTCTGACTGGTAAGACCATCACCC 124983122
Query 24034 TCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAG 24093
|||| |||||| ||| |||||||||||| | ||||| |||||| || || ||||
Sbjct 124983121 TCGAGGTCGAGCCCAGTGACACCATCGAGAATGTCAAGGCAAAGATCCAAGATAAGGAAG 124983062
Query 24094 GCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAA 24153
|||| ||||| || || ||||| ||||| | | || || || || ||||||| | |
Sbjct 124983061 GCATCCCTCCTGACCAGCAGAGGCTGATCTTTGCTGGAAAACAGCTGGAAGATGGGCGCA 124983002
Query 24154 ACGTCAGCGATTATAACATTCAAAAAGAATCTAC 24187
| | ||||| ||||| || ||||| |||||
Sbjct 124983001 CCCTGTCTGATTACAACATCCAGAAAGAGTCTAC 124982968
Score = 86.0 bits (94), Expect = 5e-12
Identities = 113/157 (72%), Gaps = 0/157 (0%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
||||| | || || || || | ||||| || | || ||| |||| |||||| |||
Sbjct 124982708 ATGCAGATCTTCGTGAAGACCCTGACTGGTAAGACCATCACCCTCGAGGTCGAGCCCAGT 124982649
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
|||||||||||| | ||||| |||||| ||||| |||||||| ||||| || ||
Sbjct 124982648 GACACCATCGAGAATGTCAAGGCAAAGATCCAAGACAAGGAAGGCATCCCTCCTGACCAG 124982589
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATG 24147
||||| |||| | | || ||||| || || ||||
Sbjct 124982588 CAGAGGTTGATCTTTGCTGGAAAGCAGCTGGAGGATG 124982552
Score = 86.0 bits (94), Expect = 5e-12
Identities = 113/157 (72%), Gaps = 0/157 (0%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
||||| | || || || || | ||||| || | || ||| | || |||||| |||
Sbjct 124982936 ATGCAGATCTTCGTGAAGACCCTGACTGGTAAGACCATCACCCTTGAGGTCGAGCCCAGT 124982877
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
|||||||||||| | ||||| |||||| ||||| |||||||| ||||| || ||
Sbjct 124982876 GACACCATCGAGAATGTCAAGGCAAAGATCCAAGACAAGGAAGGCATCCCTCCTGACCAG 124982817
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATG 24147
||||| |||| | | || ||||| || |||||||
Sbjct 124982816 CAGAGGTTGATCTTTGCTGGAAAGCAGCTGGAAGATG 124982780
>seq168
Length=201391403
Score = 82.4 bits (90), Expect = 7e-11
Identities = 150/220 (68%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046
||||||||| | || || ||||| | || ||||| | || ||| |||| || || |
Sbjct 5653670 CAAAATGCAGATTTTCGTGAAAACCCTTACGGGAAAGACCATCACCCTCGAGGTTGAACC 5653729
Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106
| || || || || | || || ||||| || || ||||| || ||||| ||
Sbjct 5653730 CTCGGATACGATAGAAAATGTAAAGGCCAAGATACAGGATAAGGAAGGAATTCCTCCTGA 5653789
Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166
||| ||||||||||| | | |||||||| || ||||||| | | | || ||
Sbjct 5653790 TCAGCAGAGACTGATCTTTGCTGGCAAGCAGCTGGAAGATGGACGTACTTTGTCTGACTA 5653849
Query 24167 TAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGA 24206
|| |||||||| || ||||| ||||| | ||||| |||
Sbjct 5653850 CAATATTCAAAAGGAGTCTACTCTTCATCTTGTGTTGAGA 5653889
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429722680670205
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |