Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gorilla_20gorilla_20gorilla_20[refseq_20GCF_5F000151905.2_202014-12-
19] 40,711 sequences; 3,063,362,794 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq389 131 1e-25
seq728 123 2e-23
seq287 118 9e-22
seq377 114 1e-20
seq646 107 2e-18
seq773 95.1 1e-14
seq860 87.8 2e-12
>seq389
Length=121655618
Score = 131 bits (144), Expect = 1e-25
Identities = 149/200 (75%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276
||||||| || ||||| || || | || || || || |||| ||||| || || |||
Sbjct 27659452 AGATGCAGATCTTTGTGAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGCCCA 27659393
Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336
|| ||| | || || |||| ||||||||||||||||||||||| || || || |
Sbjct 27659392 GTGACACCATTGAGAATGTCAATGCGAAAATTCAAGACAAGGAGGGTATACCCCCTGACC 27659333
Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396
| || ||||| ||||||||| |||||||| | |||||| ||||| |||| || ||||
Sbjct 27659332 AGCAGCGTCTGATATTTGCCAGCAAACAGCTGGAGGATGGCCGCATTCTCTCAGACTACA 27659273
Query 22397 ACATTCAAAAAGAATCCACC 22416
|||| || ||| | |||||
Sbjct 27659272 ACATCCAGAAACAGCCCACC 27659253
>seq728
Length=90977943
Score = 123 bits (136), Expect = 2e-23
Identities = 149/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276
||||||| || ||||| || || | || || || || |||| ||||| || | |||
Sbjct 41396460 AGATGCAGATCTTTGTGAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCAAGCCCA 41396519
Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336
|||| ||| | | || ||||| |||||||| |||||||||||||| ||||| | |
Sbjct 41396520 CCGACACCATTTAGAATGTCAAAGCCAAAATTCAGGACAAGGAGGGTATCCCACCTTACC 41396579
Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396
| || | ||| |||||||| || |||| | | |||||| || ||| |||| | ||||
Sbjct 41396580 AGCAGCATCTGATATTTGCTGGGAAACGGCTGGAGGATGGCCACACTCTCTCAGGCTACA 41396639
Query 22397 ACATTCAAAAAGAATCCACCATA 22419
|||| || ||||| |||||| ||
Sbjct 41396640 ACATCCAGAAAGAGTCCACCCTA 41396662
>seq287
Length=159110946
Score = 118 bits (130), Expect = 9e-22
Identities = 145/198 (73%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276
||||||| || |||| || || | || || || || |||| || || || || |||
Sbjct 25710846 AGATGCAGATCTTTGCGAAGACCCTCACAGGCAAGACCATCACCCTCGAGGTCGAGCCCA 25710787
Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336
|| ||| || || |||| |||||| |||||||||||| ||||||| || |
Sbjct 25710786 GTGACACCACTGAGAATGTCAAGGCCGAAATTCGAGACAAGGAGGGCATTCCACTTGACC 25710727
Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396
| |||||||| |||||||| ||||||||| | |||||| |||||| |||| || | ||
Sbjct 25710726 AGCAACGTCTGATATTTGCGGGCAAACAGCTGGAGGATGGCCGCACTCTCTCAGACTGCA 25710667
Query 22397 ACATTCAAAAAGAATCCA 22414
|||| || ||||| ||||
Sbjct 25710666 ACATCCAGAAAGAGTCCA 25710649
>seq377
Length=146757320
Score = 114 bits (126), Expect = 1e-20
Identities = 111/143 (78%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
|||||||| ||||||||||| || ||||| || || || ||||| ||| |||| ||||||
Sbjct 124616546 AAAATTCAGGACAAGGAGGGCATCCCACCTGACCAGCAGCGTCTGATACTTGCGGGCAAA 124616605
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422
||| | |||||| |||||| |||| || |||||||| || ||||| |||||| | ||
Sbjct 124616606 CAGCTGGAGGATGGCCGCACTCTCTCAGACTACAACATCCAGAAAGAGTCCACCCTGCAC 124616665
Query 22423 TTAGTTTTGCGATTGCGCGGAGG 22445
| || |||| |||| || ||
Sbjct 124616666 CTGGTGCTGCGCCTGCGAGGTGG 124616688
>seq646
Length=133456746
Score = 107 bits (118), Expect = 2e-18
Identities = 161/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276
||||||| || ||| | || || | || || || || |||| ||||| |||| |||
Sbjct 115608453 AGATGCAGATCTTTATGAACACCCTCACGGGCAAGACCATCACCCTTGAGGTGGGGCCCA 115608394
Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336
|| ||| | || || ||||| ||||| |||||||||||||| || | || || |
Sbjct 115608393 GTGACACCATTGAGAATGTCAAAGCTAAAATCCAAGACAAGGAGGGCATCCTGCCTGACC 115608334
Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396
| || |||| ||||||| ||||||||| | |||||| || || |||| || || |
Sbjct 115608333 AGCAGTGTCTGATATTTGTGGGCAAACAGCTGGAGGATGGCCACAGTCTCTCAGACTAGA 115608274
Query 22397 ACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
|||| || ||||| |||| | | || | || |||| |||| || ||
Sbjct 115608273 ACATCCAGAAAGAGTCCATCCTGCACCTGGTGCTGCGCCTGCGAGGTGG 115608225
Score = 98.7 bits (108), Expect = 8e-16
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277
|||||| || || || || || | || || || || |||| || || ||||| |||
Sbjct 124982253 GATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTGGAGCCCAG 124982194
Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337
|| ||| | || || |||| ||| || ||||||||||| || || || || || ||
Sbjct 124982193 TGACACCATCGAGAATGTCAAGGCAAAGATCCAAGACAAGGAAGGCATCCCTCCTGACCA 124982134
Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397
|| | | || ||||| || |||||| | || ||| |||||| | || || |||||
Sbjct 124982133 GCAGAGGTTAATCTTTGCTGGGAAACAGCTGGAAGATGGACGCACCCTGTCTGACTACAA 124982074
Query 22398 CATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||| || ||||| ||||| | || || || |||| ||| | || |||
Sbjct 124982073 CATCCAGAAAGAGTCCACTCTGCACTTGGTCCTGCGCTTGAGGGGGGGT 124982025
Score = 96.9 bits (106), Expect = 3e-15
Identities = 140/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || ||| | || ||||| || |||| || || || || |||
Sbjct 124983164 ATGCAGATCTTCGTGAAGACTCTGACTGGTAAGACCATCACCCTCGAGGTCGAGCCCAGT 124983105
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || || |||| ||| || ||||| ||||| || || || || || ||
Sbjct 124983104 GACACCATCGAGAATGTCAAGGCAAAGATCCAAGATAAGGAAGGCATCCCTCCTGACCAG 124983045
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | || || ||||| || |||||| | || ||| |||||| | || |||||||||
Sbjct 124983044 CAGAGGCTGATCTTTGCTGGAAAACAGCTGGAAGATGGGCGCACCCTGTCTGATTACAAC 124982985
Query 22399 ATTCAAAAAGAATCCACC 22416
|| || ||||| || |||
Sbjct 124982984 ATCCAGAAAGAGTCTACC 124982967
Score = 93.3 bits (102), Expect = 4e-14
Identities = 140/199 (70%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277
|||||| || || || || || | || ||||| || |||| || || || || |||
Sbjct 124982709 GATGCAGATCTTCGTGAAGACCCTGACTGGTAAGACCATCACCCTCGAGGTCGAGCCCAG 124982650
Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337
|| ||| | || || |||| ||| || ||||||||||| || || || || || ||
Sbjct 124982649 TGACACCATCGAGAATGTCAAGGCAAAGATCCAAGACAAGGAAGGCATCCCTCCTGACCA 124982590
Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397
|| | | || ||||| || || ||| | |||||| |||||| | || || |||||
Sbjct 124982589 GCAGAGGTTGATCTTTGCTGGAAAGCAGCTGGAGGATGGGCGCACCCTGTCTGACTACAA 124982530
Query 22398 CATTCAAAAAGAATCCACC 22416
||| || ||||| ||||||
Sbjct 124982529 CATCCAGAAAGAGTCCACC 124982511
Score = 93.3 bits (102), Expect = 4e-14
Identities = 140/199 (70%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277
|||||| || || || || || | || ||||| || |||| ||||| || || |||
Sbjct 124982937 GATGCAGATCTTCGTGAAGACCCTGACTGGTAAGACCATCACCCTTGAGGTCGAGCCCAG 124982878
Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337
|| ||| | || || |||| ||| || ||||||||||| || || || || || ||
Sbjct 124982877 TGACACCATCGAGAATGTCAAGGCAAAGATCCAAGACAAGGAAGGCATCCCTCCTGACCA 124982818
Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397
|| | | || ||||| || || ||| | || ||| |||||| | || || |||||
Sbjct 124982817 GCAGAGGTTGATCTTTGCTGGAAAGCAGCTGGAAGATGGGCGCACCCTGTCTGACTACAA 124982758
Query 22398 CATTCAAAAAGAATCCACC 22416
||| || ||||| ||||||
Sbjct 124982757 CATCCAGAAAGAGTCCACC 124982739
Score = 82.4 bits (90), Expect = 6e-11
Identities = 137/198 (69%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || || | || ||||| || |||| || || || || |||
Sbjct 124982480 ATGCAGATCTTCGTGAAGACCCTGACTGGTAAGACCATCACCCTCGAGGTCGAGCCCAGT 124982421
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || | |||| ||| || ||||||||||| || || || || || ||
Sbjct 124982420 GACACCATCGAGAACGTCAAGGCAAAGATCCAAGACAAGGAAGGCATCCCTCCTGACCAG 124982361
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | | || |||||||| || ||| | || ||| |||||| | || || ||||||
Sbjct 124982360 CAGAGGTTGATCTTTGCCGGAAAGCAGCTGGAAGATGGACGCACCCTGTCTGACTACAAC 124982301
Query 22399 ATTCAAAAAGAATCCACC 22416
|| || ||||| || |||
Sbjct 124982300 ATCCAGAAAGAGTCTACC 124982283
>seq773
Length=81384781
Score = 95.1 bits (104), Expect = 1e-14
Identities = 141/200 (71%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276
||||| || ||||| || || | || || | || |||| ||||| || || |||
Sbjct 38779905 AGATGTGGATCTTTGTGAAGACCCTCACAGGCCAGACCATCACCCTTGAGGTCGAGCCCA 38779846
Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336
||| || || || ||||| ||||||||||||| | |||| || | ||| || |
Sbjct 38779845 GTGATGCCACTGAGAATGTCAAAGCCAAAATTCAAGACAGGTAGGGCATCCTACCTGACC 38779786
Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396
| || |||| ||||||| ||||||||| | ||||| || ||| ||| || ||||
Sbjct 38779785 AGCAGTGTCTGATATTTGAGGGCAAACAGCTGAAGGATGGCCACACACTCTTAGACTACA 38779726
Query 22397 ACATTCAAAAAGAATCCACC 22416
|||| || ||||| ||||||
Sbjct 38779725 ACATCCAGAAAGAGTCCACC 38779706
>seq860
Length=57935654
Score = 87.8 bits (96), Expect = 2e-12
Identities = 72/88 (82%), Gaps = 0/88 (0%)
Strand=Plus/Plus
Query 22321 GGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGC 22380
||||| ||||| || || || ||||| |||||||||||||||||| | |||||| ||||
Sbjct 18438977 GGTATCCCACCTGACCAGCAGCGTCTGATATTTGCCGGCAAACAGCTGGAGGATGGCCGC 18439036
Query 22381 ACCGTCTCCGATTACAACATTCAAAAAG 22408
|| |||| || |||||||| || ||||
Sbjct 18439037 ACTCTCTCAGACTACAACATCCAGAAAG 18439064
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419519745525715
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |