Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gorilla_20gorilla_20gorilla_20[refseq_20GCF_5F000151905.2_202014-12-
19] 40,711 sequences; 3,063,362,794 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq773 95.1 2e-14
seq1 95.1 2e-14
seq235 91.5 3e-13
seq219 89.7 1e-12
>seq773
Length=81384781
Score = 95.1 bits (104), Expect = 2e-14
Identities = 67/77 (87%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 142499 AGATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTT 142558
||| ||||||| |||||||||||||||||| ||||||||||||| |||||||||||
Sbjct 3314013 AGAAAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTT 3313954
Query 142559 CGAGCCCCACATCGGGC 142575
|||||||||| | ||||
Sbjct 3313953 CGAGCCCCACGTTGGGC 3313937
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 3324964 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 3325023
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 3325024 CCCCACGTTGGGC 3325036
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 3310723 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 3310782
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 3310783 CCCACGTTGGGC 3310794
Score = 87.8 bits (96), Expect = 4e-12
Identities = 62/71 (87%), Gaps = 0/71 (0%)
Strand=Plus/Minus
Query 142505 CCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCC 142564
||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||
Sbjct 3290461 CCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGCC 3290402
Query 142565 CCACATCGGGC 142575
|||| | ||||
Sbjct 3290401 CCACGTTGGGC 3290391
Score = 84.2 bits (92), Expect = 4e-11
Identities = 64/76 (84%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||| || |||||||||||| ||||| ||||||||||||| |||||||||||||||
Sbjct 3297651 AGCCTGGCTAGCTCAGTCGGCAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 3297710
Query 142563 CCCCACATCGGGCAGA 142578
|||||| | |||| ||
Sbjct 3297711 CCCCACGTTGGGCGGA 3297726
>seq1
Length=228908639
Score = 95.1 bits (104), Expect = 2e-14
Identities = 65/72 (90%), Gaps = 1/72 (1%)
Strand=Plus/Minus
Query 142053 GTCTCTGTGGCGCAATGGAC-AGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAC 142111
|||||||||||||||||||| |||||| ||||||||||||||| ||||| |||||||||
Sbjct 138246107 GTCTCTGTGGCGCAATGGACGAGCGCGCTGGACTTCTAATCCAGAGGTTCCGGGTTCGAG 138246048
Query 142112 CCCCGCCAGAGA 142123
|||| ||||||
Sbjct 138246047 TCCCGGCAGAGA 138246036
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 125432090 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 125432031
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 125432030 CCCACGTTGGGC 125432019
>seq235
Length=173266796
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 27161659 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 27161718
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 27161719 CCCCACGTTGGGC 27161731
>seq219
Length=165317712
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 165236143 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 165236202
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 165236203 CCCACGTTGGGC 165236214
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 165249939 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 165249880
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 165249879 CCCACGTTGGGC 165249868
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027300670367951
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |