Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gorilla_20gorilla_20gorilla_20[refseq_20GCF_5F000151905.2_202014-12-
19] 40,711 sequences; 3,063,362,794 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq1 132 1e-25
seq646 125 2e-23
seq219 123 6e-23
seq235 120 7e-22
seq786 114 3e-20
seq773 114 3e-20
seq126 105 2e-17
seq698 93.3 1e-13
seq389 89.7 1e-12
>seq1
Length=228908639
Score = 132 bits (146), Expect = 1e-25
Identities = 166/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || ||||| | || ||||||| || || ||||| ||||| ||||| |
Sbjct 172116177 CCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGAC 172116118
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
| || ||||| ||||| | || || || || |||||||| | ||| ||| | ||
Sbjct 172116117 AAAGTACGTCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGA 172116058
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|||||||| ||||||||||| || || || || |||||||| | ||| | ||| |
Sbjct 172116057 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAGCC 172115998
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474
||||| ||||| |||||||| || || || || ||||| |||||||||
Sbjct 172115997 TCGAGGGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATT 172115950
>seq646
Length=133456746
Score = 125 bits (138), Expect = 2e-23
Identities = 143/192 (74%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
||||| ||||| || || || | || ||||| || ||||| | |||||||| || |||
Sbjct 124982974 TCTTTCTGGATGTTGTAATCAGACAGGGTGCGCCCATCTTCCAGCTGTTTTCCAGCAAAG 124983033
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
||||| | ||| || | ||||| ||||| ||||| ||||| || || || || ||
Sbjct 124983034 ATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTATCTTGGATCTTTGCCTTGACATTC 124983093
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | || || | || || ||||| ||||| ||||| || ||||||||||| |||
Sbjct 124983094 TCGATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTACCAGTCAGAGTCTTCACG 124983153
Query 288463 AATATCTGCATT 288474
|| |||||||||
Sbjct 124983154 AAGATCTGCATT 124983165
>seq219
Length=165317712
Score = 123 bits (136), Expect = 6e-23
Identities = 142/191 (74%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || ||||| | || || | || ||||| | || || ||||| |||
Sbjct 57062660 TCCTTCTGGATGTTGTAGTCAGAAAGAGTACCGCCATCTTCCAGCTGCTTGCCTGCAAAG 57062719
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|| || | ||| ||| | ||||| ||||||||||| ||||| || || ||||| |||
Sbjct 57062720 ATGAGCCTCTGCTGATCGTGGGGGATGCCTTCTTTATCTTGGATCTTGGCCTTCACATTT 57062779
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | || || | || ||||| || ||||| ||||| |||||||| ||||| |||
Sbjct 57062780 TCGATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACG 57062839
Query 288463 AATATCTGCAT 288473
|| ||||||||
Sbjct 57062840 AAGATCTGCAT 57062850
Score = 123 bits (136), Expect = 6e-23
Identities = 142/191 (74%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
||||| ||||| || ||||| | || ||||| || ||||| | || || ||||| |||
Sbjct 62366387 TCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAG 62366446
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|| || | ||| || ||||| ||||||||||| ||||| || || ||||| |||
Sbjct 62366447 ATGAGCCTCTGCTGGTCGGGAGGGATGCCTTCTTTATCTTGGATCTTGGCCTTCACATTT 62366506
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | || || | || || || || ||||| ||||| |||||||| ||||| |||
Sbjct 62366507 TCGATGGTGTCACTGGGCTCCACCTCCAGAGTGATGGTCTTGCCGGTCAGGGTCTTCACG 62366566
Query 288463 AATATCTGCAT 288473
|| ||||||||
Sbjct 62366567 AAGATCTGCAT 62366577
Score = 123 bits (136), Expect = 6e-23
Identities = 142/191 (74%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || ||||| | || ||||| || ||||| | || || ||||| |||
Sbjct 62366615 TCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAG 62366674
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|| || | ||| || ||||| ||||||||||||||||| || || ||||| |||
Sbjct 62366675 ATGAGCCTCTGCTGGTCGGGAGGGATGCCTTCTTTATCCTGGATCTTGGCCTTCACATTT 62366734
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | || || | || ||||| || ||||| ||||| || ||||| ||||| |||
Sbjct 62366735 TCGATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACG 62366794
Query 288463 AATATCTGCAT 288473
|| ||||||||
Sbjct 62366795 AAGATCTGCAT 62366805
Score = 111 bits (122), Expect = 4e-19
Identities = 144/198 (73%), Gaps = 6/198 (3%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || ||||| | || ||||| || ||||| | || || ||||| |||
Sbjct 62366843 TCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAG 62366902
Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
|| || | ||| || || ||| || ||||| ||||||||||| || || |||||
Sbjct 62366903 ATGAGCCTCTGCTGG---TCGGGGGGAATGCCTTCCTTATCCTGGATCTTGGCCTTCACA 62366959
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
||||| || | || || | || || || || ||||| ||||| ||||| || || ||
Sbjct 62366960 TTTTCGATGGTGTCACTGGGCTCCACCTCAAGGGTGATGGTCTTGCCGGTAAGGGTTTTC 62367019
Query 288460 ACGAATATCTGCATTATG 288477
||||| ||||||||| ||
Sbjct 62367020 ACGAAGATCTGCATTTTG 62367037
Score = 107 bits (118), Expect = 5e-18
Identities = 143/196 (73%), Gaps = 2/196 (1%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
||||| ||||| || ||||| | || |||| || ||||| || || ||||| |||
Sbjct 57062888 TCTTTCTGGATGTTGTAGTCAGAAAGACTGCGGCCATCTTCCCGCTGCTTGCCTGCAAAG 57062947
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATT-CCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
|| || | ||| || | | |||||| ||||||||||| |||||||| || || || ||
Sbjct 57062948 ATGAGCCTCTGCTGGTCA-CGGGGATTGCCTTCTTTATCTTGGATTTTGGCCTTGACATT 57063006
Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461
||| |||| | || | || ||||| || ||||| |||| || || || || || ||
Sbjct 57063007 TTCGATAGTGGCACTGGGCTCCACTTCAAGGGTGATGATCTTGCCAGTAAGGGTTTTCAC 57063066
Query 288462 GAATATCTGCATTATG 288477
||| ||||||||| ||
Sbjct 57063067 GAAGATCTGCATTTTG 57063082
>seq235
Length=173266796
Score = 120 bits (132), Expect = 7e-22
Identities = 165/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || ||||| | || ||||||| || || ||||| ||| | ||||| |
Sbjct 115827920 CCACCACGAAGTCTCAACACAAGATGAAGAGTAGAATCCTTTTGAATACTGTAGTCAGAC 115827861
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
| || | ||| ||||| | ||| ||||| || |||||||| | || ||| | ||
Sbjct 115827860 AAAGTACATCCATCTTCCAGTTGCTTTCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGA 115827801
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|||||||| ||||||||||| || || || || |||||||| | ||| | ||| |
Sbjct 115827800 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCAAGGGTTCAGCC 115827741
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477
||||| ||||| |||||| | | ||||| || | ||| ||||||||| ||
Sbjct 115827740 TCGAGGGTGATGGTCTTCTCCATAAGAGTTTTCATGAAAATCTGCATTTTG 115827690
>seq786
Length=95888799
Score = 114 bits (126), Expect = 3e-20
Identities = 164/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || ||||| | || | ||||| || |||||||| ||||| ||| | |
Sbjct 10327975 CCACCACGCAGTCTCAACACAAAATGAAGAGTAGACTCTTTTTGAATATTGTAGCCAGAC 10327916
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
| || | ||| ||||| | ||| || || || |||||| | | || ||| | ||
Sbjct 10327915 AAAGTACATCCATCTTCCAGTTGCTTGCCAGCAAAGATCGGTCTTTGCTGATCAGGAGGA 10327856
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|||||||| ||||||||||| || || || || |||||||| | ||| | ||| ||
Sbjct 10327855 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCAATGGTTCAACC 10327796
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477
| ||| ||| | |||||||| || || || || ||||| ||||||||| ||
Sbjct 10327795 TTGAGGGTGGTTGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTTG 10327745
>seq773
Length=81384781
Score = 114 bits (126), Expect = 3e-20
Identities = 164/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || ||||| | || | |||| || || ||||| |||| ||||| |
Sbjct 51769183 CCACCACGAAGTCTCAACACAAAATGAGGAGTAGACTCCTTTTGACTATTGTAGTCAGAC 51769242
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
| || | ||| ||||| | || || || || |||||||| | ||| ||| | ||
Sbjct 51769243 AAAGTACATCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGA 51769302
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|||||||| ||||||||||| || || || || |||||||| | ||| | ||| |
Sbjct 51769303 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAGCC 51769362
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477
||||| ||||| |||||||| || || || || ||||| ||||||||| ||
Sbjct 51769363 TCGAGGGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTTG 51769413
>seq126
Length=135448346
Score = 105 bits (116), Expect = 2e-17
Identities = 143/201 (71%), Gaps = 10/201 (5%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
||||| ||||| || ||||| | || ||||| || ||||| | || || ||||| |||
Sbjct 28264962 TCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAG 28265021
Query 288343 ATCAGACGCTGTTGA----------GAATCTGGGATTCCTTCTTTATCCTGGATTTTCGC 288392
|| || | ||| || | | ||| | ||||||||||||||||| || ||
Sbjct 28265022 ATGAGCCTCTGCTGGTCGGGGCTGGGGGTGGGGGGTGCCTTCTTTATCCTGGATCTTGGC 28265081
Query 288393 TTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAG 288452
||||| ||||| || | || || | || ||||| || ||||| ||||| || |||||
Sbjct 28265082 CTTCACATTTTCCATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTCTTGCCAGTCAG 28265141
Query 288453 AGTCTTGACGAATATCTGCAT 288473
||||| || || ||||||||
Sbjct 28265142 GGTCTTCACAAAGATCTGCAT 28265162
Score = 102 bits (112), Expect = 2e-16
Identities = 142/198 (72%), Gaps = 6/198 (3%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
||||| ||||| |||||||| | | ||||| | ||||| | || || |||| |||
Sbjct 28265200 TCTTTCTGGATGTTATAGTCAGAATGAGTGCGGTCATCTTCCACCTGCTTGACTGCAAAG 28265259
Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
|| || | ||| || || ||| || ||||| ||||||||||| || || |||||
Sbjct 28265260 ATGAGCCTCTGCTGG---TCCGGGGTAATGCCTTCCTTATCCTGGATCTTGGCCTTCACA 28265316
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
||||| || | || || | || ||||| || | || ||||| | ||| || |||||
Sbjct 28265317 TTTTCGATGGTGTCCCTGGGCTCCACTTCAAGGGCAATGGTCTTGCTGGTAAGGGTCTTC 28265376
Query 288460 ACGAATATCTGCATTATG 288477
||||| ||||||||| ||
Sbjct 28265377 ACGAAGATCTGCATTTTG 28265394
>seq698
Length=97154659
Score = 93.3 bits (102), Expect = 1e-13
Identities = 136/189 (72%), Gaps = 5/189 (3%)
Strand=Plus/Minus
Query 288284 CTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGA 288343
|||| ||||| |||||||| || ||| | | ||||| | || || ||||||||||
Sbjct 69931628 CTTTCTGGATTTTATAGTCAAAAAGAGTGTGGACATCTTCCAGCTGCTTGCCTGCGAAGA 69931569
Query 288344 TCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTT 288403
| || | ||| || | | ||||| |||||||||||||||| || | |||||| ||||
Sbjct 69931568 TGAGCCTCTGCTG-GTCTGGGGGATGTCTTCTTTATCCTGGATCTT-GGTTTCACATTTT 69931511
Query 288404 CTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGA 288463
| | || || ||||| || || |||| ||||| || || || ||||| ||||
Sbjct 69931510 CAGTGCTGTCACT---GTCTACCTCCAGGGTGACGGTCTTGCCAGTGAGGGTCTTCACGA 69931454
Query 288464 ATATCTGCA 288472
| |||||||
Sbjct 69931453 AGATCTGCA 69931445
>seq389
Length=121655618
Score = 89.7 bits (98), Expect = 1e-12
Identities = 133/189 (70%), Gaps = 0/189 (0%)
Strand=Plus/Plus
Query 288285 TTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGAT 288344
||| ||||| || ||||| | ||| |||| || || || | ||||| | || || ||
Sbjct 27659262 TTTCTGGATGTTGTAGTCTGAGAGAATGCGGCCATCCTCCAGCTGTTTGCTGGCAAATAT 27659321
Query 288345 CAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTC 288404
||||||||| || | || || || || || || || |||||||| || || || ||
Sbjct 27659322 CAGACGCTGCTGGTCAGGGGGTATACCCTCCTTGTCTTGAATTTTCGCATTGACATTCTC 27659381
Query 288405 TATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464
|| | || || | || || || || ||||| ||||| || || || ||||| || ||
Sbjct 27659382 AATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACAAA 27659441
Query 288465 TATCTGCAT 288473
||||||||
Sbjct 27659442 GATCTGCAT 27659450
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179039080837058
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |