Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gorilla_20gorilla_20gorilla_20[refseq_20GCF_5F000151905.2_202014-12- 19] 40,711 sequences; 3,063,362,794 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq187 82.4 9e-11 >seq187 Length=203093366 Score = 82.4 bits (90), Expect = 9e-11 Identities = 161/236 (68%), Gaps = 4/236 (2%) Strand=Plus/Minus Query 159547 ATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCAGACAGATATGT 159606 || ||||||||||| ||||| || ||| || |||||| |||||||| | | ||| Sbjct 72182252 ATCATGATTACATACCCATCCACCATTGGGGTGTTTGAAGAGAACATCAGTGACGTGTGT 72182193 Query 159607 AAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAG 159666 | | | ||| | |||| || |||| || || || || |||||| | || || ||| Sbjct 72182192 GACCTCATCCATCAACATGGAGGATAGGTCTACCTAGACGGGGCAAATATGAACGCTCAG 72182133 Query 159667 GTAGG--TCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATA 159724 || || ||| | || | |||| ||| | ||| | | || ||||| | || Sbjct 72182132 GTGGGAATCTGTC--GCCCTGGAGACTTTGGGTCTGATATCTCGCACCTAAATCTTCACC 72182075 Query 159725 AGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGTA 159780 |||| ||||| ||||| || |||| || ||||||||| | || || ||||| ||| Sbjct 72182074 AGACCTTCTGCATTCCCCACAGAGGAGGTGGTCCTGGCATGGGGCCCATTGGAGTA 72182019 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587751948094960