Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gorilla_20gorilla_20gorilla_20[refseq_20GCF_5F000151905.2_202014-12- 19] 40,711 sequences; 3,063,362,794 total letters Query= NC_016447.1 Length=219474 Score E Sequences producing significant alignments: (Bits) Value seq1 125 1e-23 >seq1 Length=228908639 Score = 125 bits (138), Expect = 1e-23 Identities = 178/250 (71%), Gaps = 3/250 (1%) Strand=Plus/Plus Query 197398 CCGCTAAATATCTCAAACGCGACAGATATTGAGAACGTGGCTTGGAACGGCCCTAAAATC 197457 || ||||| |||||| | ||||| ||||||||||| |||| || || |||| Sbjct 139815553 CCCCTAAACATCTCAGTAGACACAGAGATTGAGAACGTCATCTGGATTGGTCCCAAAAAT 139815612 Query 197458 GCTTTAGCATTTGCCAATCCTAAAGAC---GTTACCATAATGGATAAAAGCTACCAGGGT 197514 ||| | || ||||| ||| ||||| || ||||| |||| |||||||||| ||| Sbjct 139815613 GCTCTTGCTTTTGCACGTCCCAAAGAAAATGTAACCATTATGGTCAAAAGCTACCTGGGC 139815672 Query 197515 CGTGTCAACATTAGCCAAACCAACTACTCTTTGTGCATTAGGAACCTGACCGTGAATGAT 197574 || | |||| | | | | ||||| ||||||| || || ||||| |||||||| Sbjct 139815673 CGACTAGACATCACCAAGTGGAGTTACTCCCTGTGCATCAGCAATCTGACTCTGAATGAT 139815732 Query 197575 GCTGGTTCGTATAAGGCCCAAATTAACAAAAATAATTCCCAAGTCACCACCAAGGAGGAA 197634 || || || || || ||||| || ||| ||| |||| ||||||||||| | |||||| Sbjct 139815733 GCAGGATCCTACAAAGCCCAGATAAACCAAAGGAATTTTGAAGTCACCACCGACGAGGAA 139815792 Query 197635 TTTACTCTGT 197644 || || |||| Sbjct 139815793 TTCACCCTGT 139815802 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 701831464897040