Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gorilla_20gorilla_20gorilla_20[refseq_20GCF_5F000151905.2_202014-12-
19] 40,711 sequences; 3,063,362,794 total letters
Query= NC_016924.1
Length=185139
Score E
Sequences producing significant alignments: (Bits) Value
seq931 246 4e-60
seq1 141 1e-28
seq39 111 2e-19
seq377 107 2e-18
>seq931
Length=156331669
Score = 246 bits (272), Expect = 4e-60
Identities = 517/762 (68%), Gaps = 14/762 (2%)
Strand=Plus/Plus
Query 36876 ACTCCCATTTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTCTAGT 36935
|||| ||| | ||||| || || |||| || || || || || ||||||| |||
Sbjct 44830014 ACTCTCATCCTCTGATACTCGCCTACTCTCCTCTCAAAGAAGTTAGTCTTTC-----AGT 44830068
Query 36936 GATATATTTTCCATAAAATCAAATGGATTAGATGTATTATATATAG--TACTACATGATA 36993
|| ||||| ||| |||| |||||||| | | || | | | | ||| | |
Sbjct 44830069 GAAATATTCTCCGTAAAGTCAAATGGGCTC--TCTACTCCGAAAACCTTGCTAAAACCCA 44830126
Query 36994 ATTCCTTCAGAAGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGTTTA 37053
|||| || ||| || || || ||||| || ||||||| |||||| | || |
Sbjct 44830127 GTTCCAGCATAAGTCTGTCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAATTCA 44830186
Query 37054 TACCAATTAGTTTTACTGGAATTGCATCTTGAAGAAATAGTTTTTCTATTATTACAGCAT 37113
| ||||| || || || || | || || || ||| || |||||| |||||||
Sbjct 44830187 TCCCAATGAGCTTCACAGGCAAGGCCTCGGTGAGGAATTCTTGTTCTATCTGAACAGCAT 44830246
Query 37114 CTTTAACTATAT-TAACAATAACTTCTTCAGTTGGGGGATATTTTAAATATTTAAACAAT 37172
||| ||| | | || | || || | | ||| | | | | ||| ||||
Sbjct 44830247 TGATAATTATTTCTCTCACTTTCTCCTCC-GATGGTTTGTGTACCAGGTGTTTGAACATC 44830305
Query 37173 AAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTT 37232
|| || ||||||||||| |||||||| |||||||| || || | |||||| ||||| ||
Sbjct 44830306 AAGCAAGCAAAATCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAACGTG 44830365
Query 37233 AATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAG 37292
| || ||||| |||| ||| || | ||| ||||| | ||||||||| |||||||||
Sbjct 44830366 AGGCCAGGCATCGGTCCTCGTTTCTTGAGCCAGAATATCGATGCAAAAGAACCAGAAAAG 44830425
Query 37293 AAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAATCA 37352
|| || ||||| ||||| || || ||||||| | || ||| | || | | ||
Sbjct 44830426 AAGATGCCTTCTACTGCAGCGAAGGCTACAACATGTTCACCATAGGTAGCCTCTTTGTCC 44830485
Query 37353 GAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGCT 37412
|||||| | |||||||||||| || ||||| || ||| |||| ||
Sbjct 44830486 CCAATCCAGCGCAAGGCCCAATCTGCCTTCTTCTTGACACAAGGCATCGTT-CAATGGCA 44830544
Query 37413 TTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATAC 37472
|| |||||||| | |||||| |||| | || ||||| ||||| || | |||||||
Sbjct 44830545 TTGAAGAGAAATTCCCTTTCTTTGAGATCTTTGATGTAAGTGTCAATAAGGAGACTATAC 44830604
Query 37473 ATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGAT 37532
|||||||| || || ||||| || || || || || ||||| ||||| | ||||| | |
Sbjct 44830605 ATTTCAGAATGTATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCTTCTG-T 44830663
Query 37533 AAT-TGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGC 37591
||| ||||| | ||| | || | || |||||||| ||||| |||||||| ||
Sbjct 44830664 AATCTGAACTATTTGGCTAAATCGCTCCACCAAATTTTCATTTACTATGCCATCACTTGC 44830723
Query 37592 TGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATC 37633
|||||||||| | ||||||| |||||||| ||| || ||
Sbjct 44830724 TGCAAAGAAAACCAGAACATGGGATATAAAATATCTCTCCTC 44830765
Score = 141 bits (156), Expect = 1e-28
Identities = 312/460 (68%), Gaps = 11/460 (2%)
Strand=Plus/Minus
Query 37176 CATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAAT 37235
|| ||||| | ||| |||||||| ||||| || || || | |||||| ||||| || |
Sbjct 144506196 CAAGCAAAGTAACAGTGTAAACCCTCATCACTGCTAATAAGTTCATTGGAAAATGTGAGG 144506137
Query 37236 CCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAA 37295
|| ||||| | ||| ||| || | ||| ||||| ||||||||| |||||||||||
Sbjct 144506136 CCAGGCATCAGTCCTTGTTTCTTGAGCCAGAATATCAGTGCAAAAGAACCAGAAAAGAAG 144506077
Query 37296 ATACCTTCAACTGCTGCAAATGCTACAAG--ACGTGTACCGAAAGTTGAA---CTATAAT 37350
| | ||| | ||||| ||| || | || || | | | || || | |
Sbjct 144506076 GTGCTTTCCGCCAGGGCAAAGGCTGCATGCAACACGTTCTCCATGGGTAATGTCTTTGTT 144506017
Query 37351 CAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTG 37410
| || |||| |||| ||||||| || ||||| || | |||||||| |
Sbjct 144506016 CCCAA-TCCAACACAAGACCCAACCTGCCTTCTTCTTGACACAGGCA-TCGTTTCAATGG 144505959
Query 37411 CTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTAT 37470
| | |||||||| | |||||| ||||| | |||| || ||||| || | | |||
Sbjct 144505958 CACTGAAGAGAAATTCCCTTTCTTTGTTATCTTTAATAT--GTGTCAATAAGGAGATTAT 144505901
Query 37471 ACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAG 37530
|||||||| | || ||||| ||||| || || || ||||| || || | ||| |
Sbjct 144505900 TTATTTCAGAATATATGTTTTCTATAGCAATTTGGAAGCCATAGAAGCAGGAGGTTTCTG 144505841
Query 37531 ATAAT-TGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTA 37589
|||| ||||| || | || ||| | | |||||||||| | |||||||||||
Sbjct 144505840 -TAATCTGAACTTCTTGAACAAATTGTTCCACGAAGTTTTCATCTATTATCCCATCACAT 144505782
Query 37590 GCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTT 37629
||||| |||||||| |||| || |||||||| |||||
Sbjct 144505781 GCTGCGAAGAAAGCCAGAATATGGGATATAAAATATCTTT 144505742
>seq1
Length=228908639
Score = 141 bits (156), Expect = 1e-28
Identities = 168/225 (75%), Gaps = 2/225 (1%)
Strand=Plus/Plus
Query 37400 TGTTTCAATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAAT 37459
||||||||| | || |||||||| | |||||| |||| |||| ||||| |||||
Sbjct 140322443 TGTTTCAATGGTGTTGAAGAGAAATTCCCTTTCTTTGGAATCTTTTATGTAAGTGTCAAT 140322502
Query 37460 TAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACA 37519
|| | ||||||||||||||| || | ||||| || || || || || |||| |||||
Sbjct 140322503 AAGGAGACTATACATTTCAGAATGTGTGTTTTCCATGGCAATTTGGAAGTCATAGAAACA 140322562
Query 37520 CCTAGCTTCAGATAAT-TGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTA 37578
| ||||| | |||| ||||| || | ||| | || | ||||||||||| ||||
Sbjct 140322563 GCGGGCTTCTG-TAATCTGAACTTCTTGGCTAAATCGCTCCACCAAGTTTTCATTTACTA 140322621
Query 37579 TCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAAT 37623
| |||||||| |||||||||||||| |||||| ||||||||
Sbjct 140322622 TGCCATCACTTGCTGCAAAGAAAGCCAGAACACGGGATATAAAAT 140322666
>seq39
Length=107640188
Score = 111 bits (122), Expect = 2e-19
Identities = 102/129 (79%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 37200 TCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttA 37259
|||||||| || || | |||||||||||| || | || ||||| | |||| ||| ||
Sbjct 97368601 TCATCTCTGCTAATAAGTTCATTAGAAAATGTGAGGCCGGGCATCAGTCCTCGTTTCTTG 97368660
Query 37260 ATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCT 37319
| ||| ||||| | |||||||| || ||||||||||| ||||| ||||| ||||| |||
Sbjct 97368661 AGCCAGAATATCGACGCAAAAGAACCGGAAAAGAAAATGCCTTCCACTGCAGCAAAGGCT 97368720
Query 37320 ACAAGACGT 37328
|||| ||||
Sbjct 97368721 ACAACACGT 97368729
Score = 82.4 bits (90), Expect = 9e-11
Identities = 76/94 (81%), Gaps = 2/94 (2%)
Strand=Plus/Plus
Query 36872 CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTT-TCGAAAAAATTTGTCTTTCCTT 36930
||| |||||||| | ||||| || || |||| |||| || || || || ||||||||||
Sbjct 97366533 CATCACTCCCATCCTCTGATACTCGCCTACTC-TCTTCTCAAAGAAGTTAGTCTTTCCTT 97366591
Query 36931 CTAGTGATATATTTTCCATAAAATCAAATGGATT 36964
| ||||| ||||| |||||||| |||||||| ||
Sbjct 97366592 CCAGTGAAATATTCTCCATAAAGTCAAATGGGTT 97366625
>seq377
Length=146757320
Score = 107 bits (118), Expect = 2e-18
Identities = 98/124 (79%), Gaps = 0/124 (0%)
Strand=Plus/Plus
Query 37198 CTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttt 37257
|||||||||| || || | |||||| ||||| || | ||||||||| | |||||| || |
Sbjct 103162975 CTTCATCTCTGCTGATGAGTTCATTGGAAAAAGTGAGTCCTGGCATAAGACCTCTCTTCT 103163034
Query 37258 tAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATG 37317
| | ||| ||||| || ||||||||||| || ||||||| ||||| || || ||||| |
Sbjct 103163035 TTAGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAACTCCTTCTACAGCAGCAAAGG 103163094
Query 37318 CTAC 37321
| ||
Sbjct 103163095 CCAC 103163098
Score = 84.2 bits (92), Expect = 3e-11
Identities = 107/144 (74%), Gaps = 4/144 (3%)
Strand=Plus/Plus
Query 36823 TTTTTTAAAAATCTTCATCTAACGTAAATT--TTATTTCCTTATTACTATTCATAACTCC 36880
|||||||||||||| |||| || || || |||| | | || || ||||||| |
Sbjct 103151078 TTTTTTAAAAATCTGCATCCAAGGTGAAGACGTTATCTG-TGGTTTCTGC-CATAACTGC 103151135
Query 36881 CATTTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTCTAGTGATAT 36940
| ||||| ||| ||||||| | || || |||||||| |||||||||| || ||
Sbjct 103151136 AAAACGCTGATACTCTGAAACTCGTTTCTCAAAGAAATTTGTTTTTCCTTCTAAAGAAAT 103151195
Query 36941 ATTTTCCATAAAATCAAATGGATT 36964
||||||||||||||||| |||||
Sbjct 103151196 GTTTTCCATAAAATCAAAAGGATT 103151219
Score = 84.2 bits (92), Expect = 3e-11
Identities = 107/144 (74%), Gaps = 4/144 (3%)
Strand=Plus/Minus
Query 36823 TTTTTTAAAAATCTTCATCTAACGTAAATT--TTATTTCCTTATTACTATTCATAACTCC 36880
|||||||||||||| |||| || || || |||| | | || || ||||||| |
Sbjct 103176337 TTTTTTAAAAATCTGCATCCAAGGTGAAGACGTTATCTG-TGGTTTCTGC-CATAACTGC 103176280
Query 36881 CATTTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTCTAGTGATAT 36940
| ||||| ||| ||||||| | || || |||||||| |||||||||| || ||
Sbjct 103176279 AAAACGCTGATACTCTGAAACTCGTTTCTCAAAGAAATTTGTTTTTCCTTCTAAAGAAAT 103176220
Query 36941 ATTTTCCATAAAATCAAATGGATT 36964
||||||||||||||||| |||||
Sbjct 103176219 GTTTTCCATAAAATCAAAAGGATT 103176196
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 592015377384440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |