Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gorilla_20gorilla_20gorilla_20[refseq_20GCF_5F000151905.2_202014-12- 19] 40,711 sequences; 3,063,362,794 total letters Query= NC_017979.1 Length=43376 Score E Sequences producing significant alignments: (Bits) Value seq860 114 4e-21 >seq860 Length=57935654 Score = 114 bits (126), Expect = 4e-21 Identities = 193/274 (70%), Gaps = 13/274 (5%) Strand=Plus/Plus Query 958 TTCCATATGGATGTTATGGTAGAATAGCTCCTAGGTCCGGATTAGCGGCTAAGTTTATGA 1017 |||| | |||||||||||| ||| ||||||| ||||| || || || || || | Sbjct 51797876 TTCCTTCTGGATGTTATGG-AGAGTAGCTCCAAGGTCTGGCTTGGCTGCAAAACACTTTG 51797934 Query 1018 TTGATGTGGGTGCTGGTGTTATTGATCCAGACTTTAGGGGGAACGTTGGTGTTGTTTTAT 1077 ||||||| || |||||||| | ||| ||| | ||| || || ||||||||||| | | Sbjct 51797935 TTGATGTAGGAGCTGGTGTCACAGATGAAGATTATAGAGGAAATGTTGGTGTTGTACTCT 51797994 Query 1078 TTAATTTTAGC-GATAAGCGTTT----TCATATTTCAAGAGGTGATAGGATTGCTCAGTT 1132 |||||||| || | || |||| ||| | || ||||||| | ||||| ||| | Sbjct 51797995 TTAATTTTTGCAAAGAAAAGTTTGAAGTCAAA----AAAAGGTGATCGAATTGCACAGCT 51798050 Query 1133 AATTTGTGAAAAGGCTGTTTT--TCCATCCATTCAAATAGTGGATTCCTTAGAGGATTCG 1190 ||||||| || || | |||| |||| || || ||| | | || || || | Sbjct 51798051 CATTTGTG-AACGGATTTTTTAATCCAGAAATAGAAGAAGTTCAAGCTTTGGATGACACC 51798109 Query 1191 GAAAGGGGTTCTGCAGGATTTGGGTCTACCGGAA 1224 |||||||||| | ||| ||||| |||||||||| Sbjct 51798110 AAAAGGGGTTCAGGAGGTTTTGGCTCTACCGGAA 51798143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138614555333916