Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gorilla_20gorilla_20gorilla_20[refseq_20GCF_5F000151905.2_202014-12-
19] 40,711 sequences; 3,063,362,794 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq219 118 8e-22
seq389 89.7 4e-13
seq126 87.8 1e-12
>seq219
Length=165317712
Score = 118 bits (130), Expect = 8e-22
Identities = 148/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
|| ||||| || ||||| || || ||||| || | | ||| | | |||| |||| |||
Sbjct 62366375 TGCAGGGTCGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGC 62366434
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
|| |||||||| || | | ||| || ||||| || ||||||||||||||||| || ||
Sbjct 62366435 TTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGAGGGATGCCTTCTTTATCTTGGATCTTG 62366494
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
|| ||| |||| | |||||| | ||||| || ||||||| || ||||||||
Sbjct 62366495 GCCTTCACATTTTCGATGGTGTCACTGGGCTCCACCTCCAGAGTGATGGTCTTGCCGGTC 62366554
Query 101447 AAAGTTTTTACAAATATCTGCAT 101469
| || || || || ||||||||
Sbjct 62366555 AGGGTCTTCACGAAGATCTGCAT 62366577
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| ||||| | ||| | || | || ||||| || || || || || ||||| || |
Sbjct 57062624 CCACCTCTCAGACGCAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAA 57062683
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| ||| | | |||| |||| ||||| |||||||| || | | ||| |||||| | ||
Sbjct 57062684 AGAGTACCGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGATCGTGGGGG 57062743
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
||||||||||||||||| || || || ||| |||| | |||||| | ||||||
Sbjct 57062744 ATGCCTTCTTTATCTTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACT 57062803
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| || |||| || |||||||| | || || || || ||||||||
Sbjct 57062804 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 57062850
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| ||||| | ||| | || | || ||||| || || || || || ||||| || |
Sbjct 62366807 CCACCTCTCAGACGCAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAA 62366866
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| ||| | | |||| |||| ||||| |||||||| || | | ||| || ||||| |||
Sbjct 62366867 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGA 62366926
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|||||||| ||||| || || || || ||| |||| | |||||| | |||||
Sbjct 62366927 ATGCCTTCCTTATCCTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACC 62366986
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
||||| |||| || |||||||| | ||||| || || ||||||||
Sbjct 62366987 TCAAGGGTGATGGTCTTGCCGGTAAGGGTTTTCACGAAGATCTGCAT 62367033
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| ||||| | ||| | || | ||| ||||| | ||||| || || ||||| || |
Sbjct 57062852 CCACCTCTCAGACGCAGGACCAGATGCAGGGTCTACTCTTTCTGGATGTTGTAGTCAGAA 57062911
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| | | | | |||| ||| ||||| |||||||| || | | ||| || || | |||
Sbjct 57062912 AGACTGCGGCCATCTTCCCGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCACGGGGA 57062971
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|||||||||||||||| ||||| || ||| |||| | |||| || | ||||||
Sbjct 57062972 TTGCCTTCTTTATCTTGGATTTTGGCCTTGACATTTTCGATAGTGGCACTGGGCTCCACT 57063031
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
||||| |||| | ||||| || | ||||| || || ||||||||
Sbjct 57063032 TCAAGGGTGATGATCTTGCCAGTAAGGGTTTTCACGAAGATCTGCAT 57063078
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| ||||| | ||| | || | || ||||| || || || || || ||||| || |
Sbjct 62366579 CCACCTCTCAGACGCAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAA 62366638
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| ||| | | |||| |||| ||||| |||||||| || | | ||| || ||||| ||
Sbjct 62366639 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGAGGG 62366698
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|||||||||||||| || || || || ||| |||| | |||||| | ||||||
Sbjct 62366699 ATGCCTTCTTTATCCTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACT 62366758
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| || |||| || ||||| || | || || || || ||||||||
Sbjct 62366759 TCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 62366805
>seq389
Length=121655618
Score = 89.7 bits (98), Expect = 4e-13
Identities = 133/189 (70%), Gaps = 0/189 (0%)
Strand=Plus/Plus
Query 101281 TTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATAT 101340
||| || || ||||| || | || | | | | |||| |||| || || | ||||||||
Sbjct 27659262 TTTCTGGATGTTGTAGTCTGAGAGAATGCGGCCATCCTCCAGCTGTTTGCTGGCAAATAT 27659321
Query 101341 CAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTC 101400
|| |||||| || || || || || || || || ||||||||||| || ||| | ||
Sbjct 27659322 CAGACGCTGCTGGTCAGGGGGTATACCCTCCTTGTCTTGAATTTTCGCATTGACATTCTC 27659381
Query 101401 TACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAA 101460
| |||||| | || || ||||| |||| || ||||| || | || || |||||
Sbjct 27659382 AATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACAAA 27659441
Query 101461 TATCTGCAT 101469
||||||||
Sbjct 27659442 GATCTGCAT 27659450
>seq126
Length=135448346
Score = 87.8 bits (96), Expect = 1e-12
Identities = 146/213 (69%), Gaps = 10/213 (5%)
Strand=Plus/Plus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
|| ||||| || ||||| || || ||||| || | | ||| | | |||| |||| |||
Sbjct 28264950 TGCAGGGTCGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGC 28265009
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGC----------GGAATGCCTTCTTTATC 101376
|| |||||||| || | | ||| || ||||| || |||||||||||||
Sbjct 28265010 TTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGCTGGGGGTGGGGGGTGCCTTCTTTATC 28265069
Query 101377 TTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGT 101436
|| || || || ||| |||| | |||||| | |||||||| || |||| ||
Sbjct 28265070 CTGGATCTTGGCCTTCACATTTTCCATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGT 28265129
Query 101437 TTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
||||| || | || || ||||| ||||||||
Sbjct 28265130 CTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 28265162
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396081780403827
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |