Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gorilla_20gorilla_20gorilla_20[refseq_20GCF_5F000151905.2_202014-12-
19] 40,711 sequences; 3,063,362,794 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq931 143 5e-29
seq39 87.8 3e-12
>seq931
Length=156331669
Score = 143 bits (158), Expect = 5e-29
Identities = 409/614 (67%), Gaps = 30/614 (5%)
Strand=Plus/Minus
Query 25474 GATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGAT 25533
||||| ||| ||||||| |||||||| | || ||||||| |||| ||| | ||
Sbjct 44830864 GATATCTGGCAGATGTATAAGAAGGCGGAGGCTTCCTTCTGGACCACCGAGGAGGTGGAC 44830805
Query 25534 CTGGCCAAGGACATGGACGGC--TGGTACGCTCT--ATCCAAAGACGAGCAGCATTTTCT 25589
||| |||||||||| |||| ||| | | || | || || ||| ||||| |
Sbjct 44830804 CTGTCCAAGGACATT--CGGCACTGGGAACCCCTGAAGCCCGAGGAGAGAT--ATTTTAT 44830749
Query 25590 CAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGA 25649
| || ||| ||||||||||| |||||| ||||| || || ||| || ||
Sbjct 44830748 ATCCCATGTTCTGGTTTTCTTTGCAGCAAGTGATGGCATAGTAAATGAAAATTTGGTGGA 44830689
Query 25650 GAGATTCACCAGGGAAGTGCAG--TACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATG 25707
| |||| | | ||| ||| ||| || ||| |||||||| || ||||| ||
Sbjct 44830688 GCGATTTAGCCAAATAGTTCAGATTACA--GAAGCCCGCTGTTTCTATGGCTTCCAAATT 44830631
Query 25708 GCCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACA 25764
||||| ||||| | || ||||| ||||| | || || || || ||||| | |
Sbjct 44830630 GCCATGGAAAACATACATTCTGAAATGTAT---AGTCTCCTTATTGACACTTACATCAAA 44830574
Query 25765 GACGTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGG 25824
|| || || || || || || |||||| || | || || | |||||| |
Sbjct 44830573 GATCTCAAAGAAAGGGAATTTCTCTTCAATGCCATTGAACG-ATGCCTTGTGTCAAGAAG 44830515
Query 25825 AAGGCGCGGTGGGCCATGAAGTGGATCA---ACAGCCAGAGCGCTACGTTTGGCGAGCGG 25881
||||| |||||| || ||||| ||| |||| ||||| | ||| || |
Sbjct 44830514 AAGGCAGATTGGGCCTTGCGCTGGATTGGGGACAA--AGAG-GCTACCTATGGTGAACAT 44830458
Query 25882 CTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTC 25941
| |||||||| ||||| || || |||||||| || ||||| ||||| | || |||
Sbjct 44830457 GTTGTAGCCTTCGCTGCAGTAGAAGGCATCTTCTTTTCTGGTTCTTTTGCATCGATATTC 44830398
Query 25942 TGGCTCAAGCAGAAGGGGACC-ATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAG 26000
||||||||| | | | ||||| ||||| || || |||||||| || || || |||||
Sbjct 44830397 TGGCTCAAG-AAACGAGGACCGATGCCTGGCCTCACGTTTTCCAATGAACTTATTAGCAG 44830339
Query 26001 GGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAA 26060
|| |||||| | ||| | |||||||| ||| || | | || ||| || | |||||
Sbjct 44830338 AGATGAGGGTTTACACTGTGATTTTGCTTGCTTGATGTTCA---AACACCTGGTACACAA 44830282
Query 26061 ACCTTCTCAAGAGA 26074
||| || | ||||
Sbjct 44830281 ACCATCGGAGGAGA 44830268
>seq39
Length=107640188
Score = 87.8 bits (96), Expect = 3e-12
Identities = 96/125 (77%), Gaps = 2/125 (2%)
Strand=Plus/Minus
Query 25885 GTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGG 25944
|||||||||||||| ||||| ||||| || || |||||| |||||| | || ||||||
Sbjct 97368722 GTAGCCTTTGCTGCAGTGGAAGGCATTTTCTTTTCCGGTTCTTTTGCGTCGATATTCTGG 97368663
Query 25945 CTCAAGCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGA 26003
|||||| | | | |||| |||||||| || ||||| || || || || ||||| ||
Sbjct 97368662 CTCAAG-AAACGAGGACTGATGCCCGGCCTCACATTTTCTAATGAACTTATTAGCAGAGA 97368604
Query 26004 CGAGG 26008
||||
Sbjct 97368603 TGAGG 97368599
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928372122491840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |