Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gorilla_20gorilla_20gorilla_20[refseq_20GCF_5F000151905.2_202014-12- 19] 40,711 sequences; 3,063,362,794 total letters Query= NC_019559.1 Length=202946 Score E Sequences producing significant alignments: (Bits) Value seq168 125 9e-24 >seq168 Length=201391403 Score = 125 bits (138), Expect = 9e-24 Identities = 188/267 (70%), Gaps = 0/267 (0%) Strand=Plus/Plus Query 153745 CCCGCGTCCCTCAGATGCTCGTTGAAAACTACACAAGAACCTTTAATTGTAACGTGGCAA 153804 || || ||| | | |||||| || ||| | | || ||| | | ||||| || ||||| Sbjct 113845394 CCTGCTTCCTTAAAATGCTCTCTGCAAAATGCCCAGGAAGCCCTCATTGTGACATGGCAG 113845453 Query 153805 AAGAAGAAAGCTGTAGGTCCAGAAAATATGGCCACGTATAGCAAAGCCCACGGTGTAGTG 153864 || |||||||||||| | |||||||| |||| ||| | ||| | ||| || || ||| Sbjct 113845454 AAAAAGAAAGCTGTAAGCCCAGAAAACATGGTCACCTTCAGCGAGAACCATGGGGTGGTG 113845513 Query 153865 CTTCAGCCCACATATAAAGATAGAATTAATATAACCGAATTAGGTCTTTTAAACAGTAGT 153924 | ||||| | ||||| || | || || || ||| | | || || |||| | Sbjct 113845514 ATCCAGCCTGCCTATAAGGACAAGATAAACATTACCCAGCTGGGACTCCAAAACTCAACC 113845573 Query 153925 ATAACGTTTTGGAATGCAACACTGGATGATGAAGGCTGTTATATGTGTCTGTTTAATATG 153984 || || || |||||| || ||||| |||||||| ||||| |||||||| || |||| Sbjct 113845574 ATCACCTTCTGGAATATCACCCTGGAGGATGAAGGGTGTTACATGTGTCTCTTCAATACC 113845633 Query 153985 TTCGGTTCTGGTAAGGTATCGGGAACG 154011 || |||| ||| ||| | || |||||| Sbjct 113845634 TTTGGTTTTGGGAAGATCTCAGGAACG 113845660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 648968779753360