Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gorilla_20gorilla_20gorilla_20[refseq_20GCF_5F000151905.2_202014-12-
19] 40,711 sequences; 3,063,362,794 total letters
Query= NC_020474.2
Length=180421
Score E
Sequences producing significant alignments: (Bits) Value
seq389 309 3e-79
seq168 165 9e-36
seq885 109 6e-19
seq744 87.8 2e-12
>seq389
Length=121655618
Score = 309 bits (342), Expect = 3e-79
Identities = 670/993 (67%), Gaps = 17/993 (2%)
Strand=Plus/Minus
Query 160047 TGTCGCAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAATTTA 160106
|||| || ||| || |||| ||| |||| ||| || | |||||| || |||| || |||
Sbjct 58324518 TGTCTCAAATGCTCATCCAAACACTGGATGGCAAAGAGGTCAACATCCACGTCAAACTTA 58324459
Query 160107 TTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAACACG 160166
|| || |||| ||||| || | || ||||||| || ||| || | ||||| | |
Sbjct 58324458 TTGGCAAACAAGTGGTGT---TTGCGCAGCATCCAGTTCAAGTCACCAGCTCCGAAAATG 58324402
Query 160167 CAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACGTCA 160226
|| || || || | || || || ||||| |||||||| |||| || || | || |||
Sbjct 58324401 CACACTGAGCGCACATGGACTCCATTGCAGGGCGGGTAGGGAGCACCCTTGGAAACATCA 58324342
Query 160227 CCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGTAT 160286
|| || ||||||||||||| ||||||||||| | || |||||||| || || ||
Sbjct 58324341 CCCTCAAAGTACTGCCACTTGACAAACCTGGCAACTGCTTGCATGTCAGACAAATCATAC 58324282
Query 160287 TTGTACAT--CAGGGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCACA 160344
|| | | ||| | || |||||| | | || || | || | ||||||||| |
Sbjct 58324281 TTATGGCTGGCAGAGAGTGAGC-CCGGGA-CTTCAGGAATCCTTTGGATGGTGGCCCAGA 58324224
Query 160345 GGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACTCTCCGATTAACCTGT 160404
| | || || |||||||| ||||| | | ||| ||||| |||| | |||| |
Sbjct 58324223 GATACTCATCAGGGCTGTATGTGTCTTGTGCCCACTCCATAAACTTTTGGATTTTTTCAT 58324164
Query 160405 CCCGCAGAACGTGAGTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGGAGAATA 160464
| | || || | || || || | || || ||||| || ||||| || || |
Sbjct 58324163 TCTGTAGTACATACCCCACATACTCCCTACTGACCACGAAGTAGGCACTGCCAGAAAAAA 58324104
Query 160465 TCGGTAT---GGGTATAGGCGGCGTGTCTTTGTCCTGACCGGTGTTAGACACCACTCCTT 160521
||| | | || ||| || | |||| | || ||||| | || | ||| |
Sbjct 58324103 GAGGTGTTTCGAGTGGAGGAAGCAT---TTTGACAGTCCCTGTGTTTGTCAGCTTTCCAT 58324047
Query 160522 TCACCAGCGCGTGTCGCTTCTTCCACCTGACCATCTTGTGCGGTGGCATGCGTTCCGTCT 160581
| || | | | | |||||||||||||| | || || | |||||| | ||||| |
Sbjct 58324046 TAACGACCTCATACCGCTTCTTCCACCTTTCTTCTTTATGGGATGGCATCCTCTCCGTTT 58323987
Query 160582 CTAGACTGTTGGCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGGTTCGTCTTGA 160641
| || |||| | || | | | || |||| | |||| || |||||||| || || |
Sbjct 58323986 CCAGGTTGTTTTCTCCCATTAACAACTTGAGCTTCCTGACAATTTCTAGGTTGGTTTTAA 58323927
Query 160642 GCGGAAAGTCGGTACCGCACAAGTTTATCACGTACTTCCATTTCGCGCTCAGGTCGTGCA 160701
||||| || |||| || | ||||||| ||||||||| || || |||| | | |
Sbjct 58323926 TAGGAAAATCCATACCACAAAGATTTATCAAGTACTTCCAGTTTGCACTCATTGCATAGA 58323867
Query 160702 GGTCCCTCATGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTACGTTCT 160761
| ||| ||||||| || | || ||||| || |||||||| || || || || || |||
Sbjct 58323866 GATCCTTCATGCAGTTGAGGTCAGCCTGAACCCGGCTCCACGATGCATAAACCACACTCT 58323807
Query 160762 CTAGTTTACTGGCCACAAAGACGTTATCGAAACACGACACGATTCCCACCACCGCCAG-- 160819
| | | |||||||||||||| ||| ||||| || |||| |||| ||| | |||
Sbjct 58323806 CCAATCGGCTGGCCACAAAGACATTACTAAAACAGGAAGCGATGCCCATCACTG-CAGCT 58323748
Query 160820 AAAGAACATCTTATCCGCCTTTCGGTCCACGTGCACGCAATACAGGTTCTGAGGCGCGTA 160879
||| | | | || | ||| |||||| || | |||||| | ||||||||| ||
Sbjct 58323747 AAATAGGA-ATCCTCGGATTTTGTGTCCACATGAATGCAATAGAAATTCTGAGGCATATA 58323689
Query 160880 GATGGCCCTGAGCAACCTCTCGAACATCTCTATCTTATGATGGATCACGATAGAGTAGGC 160939
||||||||| |||| ||| || | ||| || ||||| ||||| | ||| ||||| || ||
Sbjct 58323688 GATGGCCCTCAGCAGCCTGTCAAGCATTTCAATCTTGTGATGAACCACTATAGAATATGC 58323629
Query 160940 TATCGGAAACTCGGTCTCCTCGCGACTCAGGGACCCGGTCAGGTACTTTCGCGTCTTGAT 160999
||| |||||||| | ||| || ||| |||| | | || || || |||||||
Sbjct 58323628 TATTGGAAACTCCGCCTCTTCTTTACTAAGGGGTTCTACAATATATTTGCGTCTCTTGAT 58323569
Query 161000 AAAATAATCACAATCCCGCGTCATGTTGATATA 161032
||| || ||| || | |||||||| |||||
Sbjct 58323568 GAAAGAAGAACAGTCACTGGTCATGTTTATATA 58323536
>seq168
Length=201391403
Score = 165 bits (182), Expect = 9e-36
Identities = 219/304 (72%), Gaps = 0/304 (0%)
Strand=Plus/Minus
Query 168169 TTCCAGAAATCTTGCCTGATCCGAACGTGTTGAAGAGGCACATGAAGCAGCCTTCGTCCT 168228
|||| || ||||| || | || || || |||||||| |||||| | || ||||| ||||
Sbjct 113845658 TTCCTGAGATCTTCCCAAAACCAAAGGTATTGAAGAGACACATGTAACACCCTTCATCCT 113845599
Query 168229 CCACGGTGGTATTCCAAAATGTTAGCGTTGAGTTTCGGAGGCCCAACTGCGTTATGTTCA 168288
||| |||| ||||||| || || | ||||||||| |||| |||| ||| || ||||| |
Sbjct 113845598 CCAGGGTGATATTCCAGAAGGTGATGGTTGAGTTTTGGAGTCCCAGCTGGGTAATGTTTA 113845539
Query 168289 CACGATCTTTATAAGGAGGTTGAACTACAACGCCGTGGTTCTCGCTGAAGGTGGCCATGT 168348
|| ||||| | ||| || | || || || |||||||||||||||||| ||||||
Sbjct 113845538 TCTTGTCCTTATAGGCAGGCTGGATCACCACCCCATGGTTCTCGCTGAAGGTGACCATGT 113845479
Query 168349 TCTCCGGGCTGGTGGCCTTTATCTTCTGCCAGGTTACTATCAGAACCTCTTTATCGGTCT 168408
| || ||||| || || | |||||||| || || || || | || | | | |
Sbjct 113845478 TTTCTGGGCTTACAGCTTTCTTTTTCTGCCATGTCACAATGAGGGCTTCCTGGGCATTTT 113845419
Query 168409 GCAGGGAACATCTCAGCGAAGCCGGAGTGTTCAGCAGTTCTCGCTCATCTTGAGTTACGA 168468
|||| || ||| | | ||||| || |||| |||| | |||| ||||| || || || |
Sbjct 113845418 GCAGAGAGCATTTTAAGGAAGCAGGTGTGTACAGCTGCTCTCTTTCATCCTGGGTCACCA 113845359
Query 168469 CCTG 168472
| ||
Sbjct 113845358 CTTG 113845355
>seq885
Length=63231202
Score = 109 bits (120), Expect = 6e-19
Identities = 236/347 (68%), Gaps = 11/347 (3%)
Strand=Plus/Plus
Query 160608 TTCAGCTGCTTGACGATCTCTAGGTTCGTCTTGAGCGGAAAGTCGGTACCGCACAAGTTT 160667
|| |||| | |||| || | |||||| || || | ||||| || ||| || | | |
Sbjct 18623366 TTGAGCTTCCTGACAATTT-TAGGTTGGTTTTAATAGGAAAATCCATACTACAAACATGT 18623424
Query 160668 ATCACGTACTTCCATTTCGCGCTCAGGTCGTGCAG--GTCCCTCATGCAATTAATATCTG 160725
|| | ||||||||| | || |||| |||||| |||||||||||| || | || |
Sbjct 18623425 ATTAAGTACTTCCAGTCTGCACTCACT--GTGCAGAGGTCCCTCATGCAGTTGAGGTCAG 18623482
Query 160726 CCTGCACGCGGCTCCAGGAAGCGTACACTACGTTCTCTAGTTTACTGGCCACAAAGACGT 160785
|| | || || ||||| | || || || | |||| | | || ||||||||||| ||
Sbjct 18623483 CCAGAACCCGACTCCACAAGGCATAAACCAGACTCTCCAACTGACAGGCCACAAAGATGT 18623542
Query 160786 TATCGAAACACGACACGATTCCCACCA---CCGCCAGAAAGAACATCTTATCCGCCTTTC 160842
|| ||| | ||| | || |||| || | || | |||| | |||| | |||
Sbjct 18623543 TACTGAA--ATGACCCAATGCCCATCACTGCAGCTAAAAAGGA-ATCTGCTGATTTTTTT 18623599
Query 160843 GGTCCACGTGCACGCAATACAGGTTCTGAGGCGCGTAGATGGCCCTGAGCAACCTCTCGA 160902
|||||| || | |||||| | ||||||||| |||||||| || | ||| || |
Sbjct 18623600 TGTCCACATGAATGCAATAGAAATTCTGAGGCATATAGATGGCTCTCCAGAGCCTGTCAA 18623659
Query 160903 ACATCTCTATCTTATGATGGATCACGATAGAGTAGGCTATCGGAAAC 160949
||| || || |||| ||| | || ||||| || ||||| ||||||
Sbjct 18623660 GCATTTCAATTTTATAATGAACCAGTATAGAATATGCTATTGGAAAC 18623706
>seq744
Length=80890724
Score = 87.8 bits (96), Expect = 2e-12
Identities = 195/290 (67%), Gaps = 7/290 (2%)
Strand=Plus/Minus
Query 160097 GTCGAATTTATTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGA 160156
||| || || || || ||||| || || ||| || || ||||| | || ||| || |
Sbjct 38056939 GTCAAACTTGTTGGCCAACAGGTGATG---GTTTTGAAGCATCCAATTCAAGTCCCCAGC 38056883
Query 160157 CCCGAACACGCAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTT 160216
||| | |||||||| | || ||| | || ||| || | || |||| || ||
Sbjct 38056882 CCCATAAACGCAGACAGCCCGCTGGTGGATTCCAGAGCAGGGAGCATAAGGAGCACCCTT 38056823
Query 160217 CGCCACGTCACCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGA 160276
| | ||| || || | ||||||||| || | |||||| || | |||||| ||
Sbjct 38056822 ATCGATGTCTCCCTCATGACCCTGCCACTTGACCAGCCTGGCAATAGAAGTCATGTCTGA 38056763
Query 160277 GGTGTCGTATTTGTACATCAGGGGAACGGCACCGGGAA--CGCCGGGCATACGCTGTAGG 160334
| ||||||| ||| |||||| | || || | | ||| ||| ||||| |||
Sbjct 38056762 GATGTCGTACTTGGGATGGTTGGGAACAGAGCCAGGCATCCACCGTGCA--CGCTGAAGG 38056705
Query 160335 GTGGCCCACAGGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCAT 160384
|||||||| |||||||| || ||||| || ||||| || |||||| ||
Sbjct 38056704 GTGGCCCAGAGGTGTTCATCAGGGCTATAGGTGTCTTTTACCCATTCAAT 38056655
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 576925460364360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |