Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gorilla_20gorilla_20gorilla_20[refseq_20GCF_5F000151905.2_202014-12- 19] 40,711 sequences; 3,063,362,794 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq187 91.5 2e-13 >seq187 Length=203093366 Score = 91.5 bits (100), Expect = 2e-13 Identities = 163/236 (69%), Gaps = 4/236 (2%) Strand=Plus/Plus Query 138182 TACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATG 138241 ||| ||||| || || | ||||||||| || |||| || ||||| ||||| |||| || Sbjct 72182019 TACTCCAATGGGCCCCATGCCAGGACCACCTCCTCTGTGGGGAATGCAGAAGGTCTGGTG 72182078 Query 138242 TAAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGA--CCTACCTGT 138299 | |||||| || | | ||| | ||| |||| | || | ||| || ||||| Sbjct 72182079 AAGATTTAGGTGCGAGATATCAGACCCAAAGTCTCCAGGGC--GACAGATTCCCACCTGA 72182136 Query 138300 GCATTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACAT 138359 || || | |||||| || || || || |||| || |||| | ||| | || | ||| Sbjct 72182137 GCGTTCATATTTGCCCCGTCTAGGTAGACCTATCCTCCATGTTGATGGATGAGGTCACAC 72182196 Query 138360 ATCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAAT 138415 | | |||||||| |||||| || ||| || ||||| ||||||||||| || Sbjct 72182197 ACGTCACTGATGTTCTCTTCAAACACCCCAATGGTGGATGGGTATGTAATCATGAT 72182252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578703754951720